RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 GPR25O00155 361 aa17.17■□□□□ 0.34
PCDHA1-201ENST00000378133 CILPO75339 1184 aa17.17■□□□□ 0.34
PCDHA1-201ENST00000378133 TGFB3P10600 412 aa17.17■□□□□ 0.34
PCDHA1-201ENST00000378133 VAV1P15498 845 aa17.17■□□□□ 0.34
PCDHA1-201ENST00000378133 ZNF143P52747 638 aaPredicted RBP17.17■□□□□ 0.34
PCDHA1-201ENST00000378133 CHI3L2Q15782 390 aa17.17■□□□□ 0.34
PCDHA1-201ENST00000378133 FAXCQ5TGI0 409 aa17.17■□□□□ 0.34
PCDHA1-201ENST00000378133 LBX2Q6XYB7 198 aa17.17■□□□□ 0.34
PCDHA1-201ENST00000378133 CYP4V2Q6ZWL3 525 aaPredicted RBP17.17■□□□□ 0.34
PCDHA1-201ENST00000378133 SATL1Q86VE3 508 aa17.17■□□□□ 0.34
PCDHA1-201ENST00000378133 PPM1NQ8N819 430 aa17.17■□□□□ 0.34
PCDHA1-201ENST00000378133 RXFP2Q8WXD0 754 aa17.17■□□□□ 0.34
PCDHA1-201ENST00000378133 PIWIL1Q96J94 861 aaKnown RBP17.17■□□□□ 0.34
PCDHA1-201ENST00000378133 PREBQ9HCU5 417 aa17.17■□□□□ 0.34
PCDHA1-201ENST00000378133 ETNK2Q9NVF9 386 aa17.17■□□□□ 0.34
PCDHA1-201ENST00000378133 IGKV6-21A0A0C4DH24 114 aa17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 MEI4A8MW99 385 aa17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 TRIM49D1C9J1S8 452 aa17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 NOP56O00567 594 aaKnown RBP17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 KCNN4O15554 427 aa17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 ENDOD1O94919 500 aa17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 SETSIPP0DME0 302 aa17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 PDGFRAP16234 1089 aa17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 VCLP18206 1134 aa17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 GABRB2P47870 512 aa17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 CLCN3P51790 818 aa17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 UBAP2LQ14157 1087 aaKnown RBP17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 ACAP1Q15027 740 aa17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 TBCCQ15814 346 aa17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 JADE1Q6IE81 842 aa17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 CRLF3Q8IUI8 442 aa17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 SHKBP1Q8TBC3 707 aa17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 NMD3Q96D46 503 aaKnown RBP17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 GPR20Q99678 358 aa17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 KLHL4Q9C0H6 718 aa17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 USP29Q9HBJ7 922 aa17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 GALNT8Q9NY28 637 aa17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 SOX13Q9UN79 622 aa17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 PPME1Q9Y570 386 aa17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 HEY1Q9Y5J3 304 aa17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 ANK1P16157 1881 aa17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 TPP2P29144 1249 aaPredicted RBP17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 PDE1BQ01064 536 aa17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 EFHC1Q5JVL4 640 aa17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 OR6B2Q6IFH4 312 aa17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 SLC26A7Q8TE54 656 aa17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 MAF1Q9H063 256 aa17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 CLIC5Q9NZA1 410 aa17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 PLLPQ9Y342 182 aa17.16■□□□□ 0.34
PCDHA1-201ENST00000378133 CXorf49A8MYA2 514 aaPredicted RBP17.15■□□□□ 0.34
PCDHA1-201ENST00000378133 SERPINA6P08185 405 aa17.15■□□□□ 0.34
PCDHA1-201ENST00000378133 GPD1P21695 349 aa17.15■□□□□ 0.34
PCDHA1-201ENST00000378133 SLC25A3Q00325 362 aa17.15■□□□□ 0.34
PCDHA1-201ENST00000378133 GRM2Q14416 872 aa17.15■□□□□ 0.34
PCDHA1-201ENST00000378133 TTC39BQ5VTQ0 682 aaPredicted RBP17.15■□□□□ 0.34
PCDHA1-201ENST00000378133 MAP1SQ66K74 1059 aaPredicted RBP17.15■□□□□ 0.34
PCDHA1-201ENST00000378133 SCYL2Q6P3W7 929 aa17.15■□□□□ 0.34
PCDHA1-201ENST00000378133 NUDCD3Q8IVD9 361 aa17.15■□□□□ 0.34
PCDHA1-201ENST00000378133 SLC13A1Q9BZW2 595 aa17.15■□□□□ 0.34
PCDHA1-201ENST00000378133 EVPLQ92817 2033 aa17.15■□□□□ 0.34
PCDHA1-201ENST00000378133 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.15■□□□□ 0.34
PCDHA1-201ENST00000378133 SMIM31A0A1B0GVY4 71 aa17.15■□□□□ 0.34
PCDHA1-201ENST00000378133 OR6B1O95007 311 aa17.15■□□□□ 0.34
PCDHA1-201ENST00000378133 AQP4P55087 323 aa17.15■□□□□ 0.34
PCDHA1-201ENST00000378133 MMEL1Q495T6 779 aa17.15■□□□□ 0.34
PCDHA1-201ENST00000378133 WDR78Q5VTH9 848 aa17.15■□□□□ 0.34
PCDHA1-201ENST00000378133 CES4AQ5XG92 561 aa17.15■□□□□ 0.34
PCDHA1-201ENST00000378133 EFCAB12Q6NXP0 572 aa17.15■□□□□ 0.34
PCDHA1-201ENST00000378133 RNF111Q6ZNA4 994 aa17.15■□□□□ 0.34
PCDHA1-201ENST00000378133 SLC26A11Q86WA9 606 aa17.15■□□□□ 0.34
PCDHA1-201ENST00000378133 RBM12BQ8IXT5 1001 aaKnown RBP17.15■□□□□ 0.34
PCDHA1-201ENST00000378133 MPP4Q96JB8 637 aa17.15■□□□□ 0.34
PCDHA1-201ENST00000378133 RNF157Q96PX1 679 aa17.15■□□□□ 0.34
PCDHA1-201ENST00000378133 PPP1R16BQ96T49 567 aa17.15■□□□□ 0.34
PCDHA1-201ENST00000378133 CNPY3Q9BT09 278 aa17.15■□□□□ 0.34
PCDHA1-201ENST00000378133 GPATCH2LQ9NWQ4 482 aa17.15■□□□□ 0.34
PCDHA1-201ENST00000378133 ADAMTS6Q9UKP5 1117 aa17.15■□□□□ 0.34
PCDHA1-201ENST00000378133 C2CD4BA6NLJ0 364 aa17.14■□□□□ 0.33
PCDHA1-201ENST00000378133 CYB561D2O14569 222 aa17.14■□□□□ 0.33
PCDHA1-201ENST00000378133 CHADO15335 359 aa17.14■□□□□ 0.33
PCDHA1-201ENST00000378133 GAS2O43903 313 aaKnown RBP17.14■□□□□ 0.33
PCDHA1-201ENST00000378133 PRPSAP2O60256 369 aa17.14■□□□□ 0.33
PCDHA1-201ENST00000378133 C6orf222P0C671 652 aaPredicted RBP17.14■□□□□ 0.33
PCDHA1-201ENST00000378133 STAG3L1P0CL83 205 aa17.14■□□□□ 0.33
PCDHA1-201ENST00000378133 RBL1P28749 1068 aa17.14■□□□□ 0.33
PCDHA1-201ENST00000378133 CPOXP36551 454 aa17.14■□□□□ 0.33
PCDHA1-201ENST00000378133 YWHAZP63104 245 aaKnown RBP17.14■□□□□ 0.33
PCDHA1-201ENST00000378133 DLG1Q12959 904 aa17.14■□□□□ 0.33
PCDHA1-201ENST00000378133 MSLNQ13421 630 aaPredicted RBP17.14■□□□□ 0.33
PCDHA1-201ENST00000378133 TFDP2Q14188 446 aa17.14■□□□□ 0.33
PCDHA1-201ENST00000378133 KRT81Q14533 505 aa17.14■□□□□ 0.33
PCDHA1-201ENST00000378133 RIOX2Q8IUF8 465 aa17.14■□□□□ 0.33
PCDHA1-201ENST00000378133 PLD5Q8N7P1 536 aa17.14■□□□□ 0.33
PCDHA1-201ENST00000378133 GDPD5Q8WTR4 605 aa17.14■□□□□ 0.33
PCDHA1-201ENST00000378133 SYT17Q9BSW7 474 aa17.14■□□□□ 0.33
PCDHA1-201ENST00000378133 TXNDC9O14530 226 aa17.14■□□□□ 0.33
PCDHA1-201ENST00000378133 IL18RAPO95256 599 aa17.14■□□□□ 0.33
PCDHA1-201ENST00000378133 ASLP04424 464 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms