RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 SCOCQ9UIL1 159 aa13.67□□□□□ -0.22
ACTN1-202ENST00000376839 EMCNQ9ULC0 261 aa13.67□□□□□ -0.22
ACTN1-202ENST00000376839 PPM1HQ9ULR3 514 aa13.67□□□□□ -0.22
ACTN1-202ENST00000376839 PCDHA11Q9Y5I1 949 aa13.67□□□□□ -0.22
ACTN1-202ENST00000376839 A0A0G2JMZ2 1700 aa13.66□□□□□ -0.22
ACTN1-202ENST00000376839 LRRC37A2A6NM11 1700 aa13.66□□□□□ -0.22
ACTN1-202ENST00000376839 WDR90Q96KV7 1748 aa13.66□□□□□ -0.22
ACTN1-202ENST00000376839 CIB2O75838 187 aa13.66□□□□□ -0.22
ACTN1-202ENST00000376839 FESP07332 822 aa13.66□□□□□ -0.22
ACTN1-202ENST00000376839 SERPINA6P08185 405 aa13.66□□□□□ -0.22
ACTN1-202ENST00000376839 C6orf222P0C671 652 aaPredicted RBP13.66□□□□□ -0.22
ACTN1-202ENST00000376839 P4HA1P13674 534 aa13.66□□□□□ -0.22
ACTN1-202ENST00000376839 WASHC5Q12768 1159 aa13.66□□□□□ -0.22
ACTN1-202ENST00000376839 TMEM132DQ14C87 1099 aa13.66□□□□□ -0.22
ACTN1-202ENST00000376839 TRMT5Q32P41 509 aaKnown RBP13.66□□□□□ -0.22
ACTN1-202ENST00000376839 C1orf146Q5VVC0 180 aa13.66□□□□□ -0.22
ACTN1-202ENST00000376839 SMYD5Q6GMV2 418 aa13.66□□□□□ -0.22
ACTN1-202ENST00000376839 ATG14Q6ZNE5 492 aa13.66□□□□□ -0.22
ACTN1-202ENST00000376839 FBXO16Q8IX29 292 aaPredicted RBP13.66□□□□□ -0.22
ACTN1-202ENST00000376839 TRPM4Q8TD43 1214 aa13.66□□□□□ -0.22
ACTN1-202ENST00000376839 APBB2Q92870 758 aa13.66□□□□□ -0.22
ACTN1-202ENST00000376839 GATA6Q92908 595 aa13.66□□□□□ -0.22
ACTN1-202ENST00000376839 FGD4Q96M96 766 aa13.66□□□□□ -0.22
ACTN1-202ENST00000376839 NT5C1AQ9BXI3 368 aa13.66□□□□□ -0.22
ACTN1-202ENST00000376839 MIS12Q9H081 205 aa13.66□□□□□ -0.22
ACTN1-202ENST00000376839 THAP1Q9NVV9 213 aa13.66□□□□□ -0.22
ACTN1-202ENST00000376839 ANGPTL2Q9UKU9 493 aa13.66□□□□□ -0.22
ACTN1-202ENST00000376839 A0A087WZ62 844 aa13.66□□□□□ -0.22
ACTN1-202ENST00000376839 BIRC5O15392 142 aa13.66□□□□□ -0.22
ACTN1-202ENST00000376839 PAPSS1O43252 624 aaPredicted RBP13.66□□□□□ -0.22
ACTN1-202ENST00000376839 GSTA2P09210 222 aa13.66□□□□□ -0.22
ACTN1-202ENST00000376839 GNAT1P11488 350 aa13.66□□□□□ -0.22
ACTN1-202ENST00000376839 CPOXP36551 454 aa13.66□□□□□ -0.22
ACTN1-202ENST00000376839 CACNA2D1P54289 1103 aa13.66□□□□□ -0.22
ACTN1-202ENST00000376839 TUBB3Q13509 450 aa13.66□□□□□ -0.22
ACTN1-202ENST00000376839 ZRSR2Q15696 482 aaKnown RBP13.66□□□□□ -0.22
ACTN1-202ENST00000376839 SH3D19Q5HYK7 790 aa13.66□□□□□ -0.22
ACTN1-202ENST00000376839 KCNT2Q6UVM3 1135 aa13.66□□□□□ -0.22
ACTN1-202ENST00000376839 DLK2Q6UY11 383 aa13.66□□□□□ -0.22
ACTN1-202ENST00000376839 CDKL3Q8IVW4 592 aaPredicted RBP13.66□□□□□ -0.22
ACTN1-202ENST00000376839 LPIN3Q9BQK8 851 aa13.66□□□□□ -0.22
ACTN1-202ENST00000376839 FDXACB1Q9BRP7 624 aaPredicted RBP13.66□□□□□ -0.22
ACTN1-202ENST00000376839 RNPEPQ9H4A4 650 aa13.66□□□□□ -0.22
ACTN1-202ENST00000376839 DNAJC16Q9Y2G8 782 aa13.66□□□□□ -0.22
ACTN1-202ENST00000376839 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.65□□□□□ -0.22
ACTN1-202ENST00000376839 WDR27A2RRH5 827 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 GCATO75600 419 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 BAG2O95816 211 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 UBTFL6P0CB48 400 aaPredicted RBP13.65□□□□□ -0.22
ACTN1-202ENST00000376839 TPSB2P20231 275 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 KCNA4P22459 653 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 YY1P25490 414 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 GMPRP36959 345 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 SLC25A3Q00325 362 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 TPSAB1Q15661 275 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 DNAL1Q4LDG9 190 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 MBLAC2Q68D91 279 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 IZUMO2Q6UXV1 221 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 DENND5BQ6ZUT9 1274 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 ACOT1Q86TX2 421 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 POU5F2Q8N7G0 328 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 NETO2Q8NC67 525 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 GSTCDQ8NEC7 633 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 PPP1R14CQ8TAE6 165 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 RAB3IL1Q8TBN0 382 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 CLEC4CQ8WTT0 213 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 CXCL16Q9H2A7 254 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 DHX35Q9H5Z1 703 aaKnown RBP13.65□□□□□ -0.22
ACTN1-202ENST00000376839 PRMT7Q9NVM4 692 aaPredicted RBP13.65□□□□□ -0.22
ACTN1-202ENST00000376839 MOCS1Q9NZB8 636 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 C2CD2Q9Y426 696 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 NME7Q9Y5B8 376 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 MYO18AQ92614 2054 aaKnown RBP13.65□□□□□ -0.22
ACTN1-202ENST00000376839 MDM4O15151 490 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 C22orf31O95567 290 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 ALDOAP04075 364 aaKnown RBP13.65□□□□□ -0.22
ACTN1-202ENST00000376839 MCF2P10911 925 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 FGF3P11487 239 aaPredicted RBP13.65□□□□□ -0.22
ACTN1-202ENST00000376839 L1CAMP32004 1257 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 SLC6A3Q01959 620 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 CDK18Q07002 472 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 TEDDM1Q5T9Z0 273 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 N4BP2L1Q5TBK1 243 aaPredicted RBP13.65□□□□□ -0.22
ACTN1-202ENST00000376839 ARCQ7LC44 396 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 EXOC8Q8IYI6 725 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 USP6NLQ92738 828 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 TBCBQ99426 244 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 DDX50Q9BQ39 737 aaKnown RBP13.65□□□□□ -0.22
ACTN1-202ENST00000376839 ASB7Q9H672 318 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 GGA3Q9NZ52 723 aa13.65□□□□□ -0.22
ACTN1-202ENST00000376839 A0A088AWK7 358 aa13.64□□□□□ -0.23
ACTN1-202ENST00000376839 TPP1O14773 563 aa13.64□□□□□ -0.23
ACTN1-202ENST00000376839 AHCYL1O43865 530 aa13.64□□□□□ -0.23
ACTN1-202ENST00000376839 VAV1P15498 845 aa13.64□□□□□ -0.23
ACTN1-202ENST00000376839 ARF4P18085 180 aaPredicted RBP13.64□□□□□ -0.23
ACTN1-202ENST00000376839 SERPINB9P50453 376 aa13.64□□□□□ -0.23
ACTN1-202ENST00000376839 PDE1BQ01064 536 aa13.64□□□□□ -0.23
ACTN1-202ENST00000376839 PKDCCQ504Y2 493 aa13.64□□□□□ -0.23
ACTN1-202ENST00000376839 DALRD3Q5D0E6 543 aaKnown RBP13.64□□□□□ -0.23
ACTN1-202ENST00000376839 RABGAP1LQ5R372 815 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms