RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 CYP2C8P10632 490 aa12.79□□□□□ -0.36
VPS13A-204ENST00000376634 FGFR2P21802 821 aa12.79□□□□□ -0.36
VPS13A-204ENST00000376634 CCR4P51679 360 aa12.79□□□□□ -0.36
VPS13A-204ENST00000376634 HIRAP54198 1017 aaPredicted RBP12.79□□□□□ -0.36
VPS13A-204ENST00000376634 ZBTB49Q6ZSB9 765 aa12.79□□□□□ -0.36
VPS13A-204ENST00000376634 ITGB1BP2Q9UKP3 347 aa12.79□□□□□ -0.36
VPS13A-204ENST00000376634 ABCC3O15438 1527 aa12.79□□□□□ -0.36
VPS13A-204ENST00000376634 CPS1P31327 1500 aa12.79□□□□□ -0.36
VPS13A-204ENST00000376634 H7C1W4 665 aa12.79□□□□□ -0.36
VPS13A-204ENST00000376634 NCAM2O15394 837 aa12.79□□□□□ -0.36
VPS13A-204ENST00000376634 PARNO95453 639 aaKnown RBP12.79□□□□□ -0.36
VPS13A-204ENST00000376634 BAATQ14032 418 aaPredicted RBP12.79□□□□□ -0.36
VPS13A-204ENST00000376634 BTN2A1Q7KYR7 527 aa12.79□□□□□ -0.36
VPS13A-204ENST00000376634 OR2W6PQ8NHA6 318 aa12.79□□□□□ -0.36
VPS13A-204ENST00000376634 HMG20AQ9NP66 347 aa12.79□□□□□ -0.36
VPS13A-204ENST00000376634 ATG7O95352 703 aa12.79□□□□□ -0.36
VPS13A-204ENST00000376634 CETPP11597 493 aa12.79□□□□□ -0.36
VPS13A-204ENST00000376634 LPCAT2Q7L5N7 544 aa12.79□□□□□ -0.36
VPS13A-204ENST00000376634 COL23A1Q86Y22 540 aaPredicted RBP12.79□□□□□ -0.36
VPS13A-204ENST00000376634 IFNLR1Q8IU57 520 aaPredicted RBP12.79□□□□□ -0.36
VPS13A-204ENST00000376634 SVOPQ8N4V2 548 aa12.79□□□□□ -0.36
VPS13A-204ENST00000376634 MTMR12Q9C0I1 747 aa12.79□□□□□ -0.36
VPS13A-204ENST00000376634 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.79□□□□□ -0.36
VPS13A-204ENST00000376634 HEY2Q9UBP5 337 aa12.79□□□□□ -0.36
VPS13A-204ENST00000376634 HACL1Q9UJ83 578 aa12.79□□□□□ -0.36
VPS13A-204ENST00000376634 ZNRF3Q9ULT6 936 aa12.79□□□□□ -0.36
VPS13A-204ENST00000376634 KLHL41O60662 606 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 RASA2Q15283 850 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 MAPK11Q15759 364 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 FAM220AQ7Z4H9 259 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 NEDD1Q8NHV4 660 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 PROX1Q92786 737 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 SH3GLB1Q9Y371 365 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 STX11O75558 287 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 ZCCHC18P0CG32 403 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 TAGLN3Q9UI15 199 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 CCDC154A6NI56 674 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 WWP2O00308 870 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 HOXA2O43364 376 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 SLC25A27O95847 323 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 WEE1P30291 646 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 KCNB2Q92953 911 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 ANKRD27Q96NW4 1050 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 DAPK2Q9UIK4 370 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 PHTF1Q9UMS5 762 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 RPLP2P05387 115 aaKnown RBP12.78□□□□□ -0.36
VPS13A-204ENST00000376634 ANXA6P08133 673 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 CYP20A1Q6UW02 462 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 HK2P52789 917 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 MIB1Q86YT6 1006 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 IQGAP1P46940 1657 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 ABCA9Q8IUA7 1624 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 NQO1P15559 274 aaKnown RBP12.78□□□□□ -0.36
VPS13A-204ENST00000376634 PSMB9P28065 219 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 RALGDSQ12967 914 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 TOMM20Q15388 145 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 CCDC153Q494R4 210 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 EPS8L3Q8TE67 593 aaKnown RBP12.78□□□□□ -0.36
VPS13A-204ENST00000376634 USP7Q93009 1102 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 CNOT7Q9UIV1 285 aaKnown RBP12.78□□□□□ -0.36
VPS13A-204ENST00000376634 ADGRB3O60242 1522 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 SETBP1Q9Y6X0 1596 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 TFRCP02786 760 aaKnown RBP12.78□□□□□ -0.36
VPS13A-204ENST00000376634 CYP2A7P20853 494 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 TKTP29401 623 aaKnown RBP12.78□□□□□ -0.36
VPS13A-204ENST00000376634 PTGISQ16647 500 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 BRINP3Q76B58 766 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 FAM120BQ96EK7 910 aaKnown RBP12.78□□□□□ -0.36
VPS13A-204ENST00000376634 ALDH8A1Q9H2A2 487 aaPredicted RBP12.78□□□□□ -0.36
VPS13A-204ENST00000376634 C17orf75Q9HAS0 396 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 TULP4Q9NRJ4 1543 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 EFCAB10A6NFE3 127 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 CHURC1-FNTBB4DL54 471 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 FOXN1O15353 648 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 B3GAT3O94766 335 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 MTA2O94776 668 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 KLK7P49862 253 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 GRIK3Q13003 919 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 MKNK1Q9BUB5 465 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 DCLRE1BQ9H816 532 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 KNTC1P50748 2209 aa12.78□□□□□ -0.36
VPS13A-204ENST00000376634 PIK3CDO00329 1044 aa12.77□□□□□ -0.36
VPS13A-204ENST00000376634 VPS4BO75351 444 aa12.77□□□□□ -0.36
VPS13A-204ENST00000376634 FGRP09769 529 aa12.77□□□□□ -0.36
VPS13A-204ENST00000376634 CORO7P57737 925 aa12.77□□□□□ -0.36
VPS13A-204ENST00000376634 BBS4Q96RK4 519 aa12.77□□□□□ -0.36
VPS13A-204ENST00000376634 ING3Q9NXR8 418 aa12.77□□□□□ -0.36
VPS13A-204ENST00000376634 COPG2Q9UBF2 871 aa12.77□□□□□ -0.36
VPS13A-204ENST00000376634 DYNC1LI2O43237 492 aaPredicted RBP12.77□□□□□ -0.36
VPS13A-204ENST00000376634 URODP06132 367 aa12.77□□□□□ -0.36
VPS13A-204ENST00000376634 RENBPP51606 427 aa12.77□□□□□ -0.36
VPS13A-204ENST00000376634 MTA1Q13330 715 aa12.77□□□□□ -0.36
VPS13A-204ENST00000376634 CBWD2Q8IUF1 395 aa12.77□□□□□ -0.36
VPS13A-204ENST00000376634 OR6B1O95007 311 aa12.77□□□□□ -0.36
VPS13A-204ENST00000376634 HLA-DQA2P01906 255 aa12.77□□□□□ -0.36
VPS13A-204ENST00000376634 HIST1H2ABP04908 130 aa12.77□□□□□ -0.36
VPS13A-204ENST00000376634 AQP5P55064 265 aa12.77□□□□□ -0.36
VPS13A-204ENST00000376634 SGCGQ13326 291 aa12.77□□□□□ -0.36
VPS13A-204ENST00000376634 HIST3H2AQ7L7L0 130 aa12.77□□□□□ -0.36
VPS13A-204ENST00000376634 HIST1H2ACQ93077 130 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms