RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 NT5DC4Q86YG4 428 aa15.04■□□□□ -0
MSH5-201ENST00000375703 OTUD5Q96G74 571 aa15.04■□□□□ -0
MSH5-201ENST00000375703 GCOM2Q9BZD3 368 aaPredicted RBP15.04■□□□□ -0
MSH5-201ENST00000375703 XAB2Q9HCS7 855 aaKnown RBP15.04■□□□□ -0
MSH5-201ENST00000375703 MOCS1Q9NZB8 636 aa15.04■□□□□ -0
MSH5-201ENST00000375703 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.03■□□□□ -0
MSH5-201ENST00000375703 DPPA5A6NC42 116 aa15.03■□□□□ -0
MSH5-201ENST00000375703 SPECC1L-ADORA2AF8WAN1 911 aa15.03■□□□□ -0
MSH5-201ENST00000375703 SNNO75324 88 aaPredicted RBP15.03■□□□□ -0
MSH5-201ENST00000375703 ALDH18A1P54886 795 aaKnown RBP15.03■□□□□ -0
MSH5-201ENST00000375703 SARNPP82979 210 aaKnown RBP15.03■□□□□ -0
MSH5-201ENST00000375703 CDK18Q07002 472 aa15.03■□□□□ -0
MSH5-201ENST00000375703 ZRSR2Q15696 482 aaKnown RBP15.03■□□□□ -0
MSH5-201ENST00000375703 DPYSL2Q16555 572 aa15.03■□□□□ -0
MSH5-201ENST00000375703 HEATR6Q6AI08 1181 aaKnown RBP15.03■□□□□ -0
MSH5-201ENST00000375703 TIFABQ6ZNK6 161 aa15.03■□□□□ -0
MSH5-201ENST00000375703 ZCCHC23Q6ZST2 131 aa15.03■□□□□ -0
MSH5-201ENST00000375703 ADGRF2Q8IZF7 708 aa15.03■□□□□ -0
MSH5-201ENST00000375703 C7orf31Q8N865 590 aa15.03■□□□□ -0
MSH5-201ENST00000375703 RBM15BQ8NDT2 890 aaKnown RBP15.03■□□□□ -0
MSH5-201ENST00000375703 FBXO27Q8NI29 283 aa15.03■□□□□ -0
MSH5-201ENST00000375703 PPP1R14CQ8TAE6 165 aa15.03■□□□□ -0
MSH5-201ENST00000375703 AFG1LQ8WV93 481 aa15.03■□□□□ -0
MSH5-201ENST00000375703 WDR90Q96KV7 1748 aa15.03■□□□□ -0
MSH5-201ENST00000375703 ELP3Q9H9T3 547 aa15.03■□□□□ -0
MSH5-201ENST00000375703 TAGLN3Q9UI15 199 aa15.03■□□□□ -0
MSH5-201ENST00000375703 KAT6AQ92794 2004 aa15.03■□□□□ -0
MSH5-201ENST00000375703 EVPLQ92817 2033 aa15.03■□□□□ -0
MSH5-201ENST00000375703 A0A0G2JLL6 359 aaPredicted RBP15.03■□□□□ -0
MSH5-201ENST00000375703 TOMM70O94826 608 aa15.03■□□□□ -0
MSH5-201ENST00000375703 NBPF20Q3BBV1 942 aa15.03■□□□□ -0
MSH5-201ENST00000375703 GJC2Q5T442 439 aaPredicted RBP15.03■□□□□ -0
MSH5-201ENST00000375703 PRRT2Q7Z6L0 340 aaPredicted RBP15.03■□□□□ -0
MSH5-201ENST00000375703 ZDHHC17Q8IUH5 632 aa15.03■□□□□ -0
MSH5-201ENST00000375703 PPFIBP2Q8ND30 876 aa15.03■□□□□ -0
MSH5-201ENST00000375703 THAP1Q9NVV9 213 aa15.03■□□□□ -0
MSH5-201ENST00000375703 TSPAN1O60635 241 aa15.02■□□□□ -0
MSH5-201ENST00000375703 TOP3BO95985 862 aaKnown RBP15.02■□□□□ -0
MSH5-201ENST00000375703 LGALS2P05162 132 aa15.02■□□□□ -0
MSH5-201ENST00000375703 LINGO3P0C6S8 592 aa15.02■□□□□ -0
MSH5-201ENST00000375703 SKIP12755 728 aa15.02■□□□□ -0
MSH5-201ENST00000375703 SEMA5AQ13591 1074 aa15.02■□□□□ -0
MSH5-201ENST00000375703 CASC4Q6P4E1 433 aa15.02■□□□□ -0
MSH5-201ENST00000375703 CYS1Q717R9 158 aa15.02■□□□□ -0
MSH5-201ENST00000375703 ARCQ7LC44 396 aa15.02■□□□□ -0
MSH5-201ENST00000375703 SCUBE1Q8IWY4 988 aa15.02■□□□□ -0
MSH5-201ENST00000375703 LINC01465Q8N7H1 131 aa15.02■□□□□ -0
MSH5-201ENST00000375703 CLEC4CQ8WTT0 213 aa15.02■□□□□ -0
MSH5-201ENST00000375703 LPIN3Q9BQK8 851 aa15.02■□□□□ -0
MSH5-201ENST00000375703 CCDC106Q9BWC9 280 aa15.02■□□□□ -0
MSH5-201ENST00000375703 ZNF212Q9UDV6 495 aa15.02■□□□□ -0
MSH5-201ENST00000375703 AP4E1Q9UPM8 1137 aa15.02■□□□□ -0
MSH5-201ENST00000375703 HBS1LQ9Y450 684 aaKnown RBP15.02■□□□□ -0
MSH5-201ENST00000375703 NR2E3Q9Y5X4 410 aa15.02■□□□□ -0
MSH5-201ENST00000375703 WDR27A2RRH5 827 aa15.02□□□□□ -0.01
MSH5-201ENST00000375703 UPP2O95045 317 aa15.02□□□□□ -0.01
MSH5-201ENST00000375703 AMPD1P23109 780 aa15.02□□□□□ -0.01
MSH5-201ENST00000375703 CNTFP26441 200 aa15.02□□□□□ -0.01
MSH5-201ENST00000375703 PTPN9P43378 593 aa15.02□□□□□ -0.01
MSH5-201ENST00000375703 WASHC5Q12768 1159 aa15.02□□□□□ -0.01
MSH5-201ENST00000375703 FASTKD1Q53R41 847 aaKnown RBP15.02□□□□□ -0.01
MSH5-201ENST00000375703 KYAT3Q6YP21 454 aaKnown RBP15.02□□□□□ -0.01
MSH5-201ENST00000375703 UNC5BQ8IZJ1 945 aa15.02□□□□□ -0.01
MSH5-201ENST00000375703 OR6B3Q8NGW1 331 aa15.02□□□□□ -0.01
MSH5-201ENST00000375703 CSPG4P5Q96PW8 444 aa15.02□□□□□ -0.01
MSH5-201ENST00000375703 CXCL16Q9H2A7 254 aa15.02□□□□□ -0.01
MSH5-201ENST00000375703 DCAF8L1A6NGE4 600 aa15.01□□□□□ -0.01
MSH5-201ENST00000375703 F5H423 210 aaPredicted RBP15.01□□□□□ -0.01
MSH5-201ENST00000375703 SERPINA6P08185 405 aa15.01□□□□□ -0.01
MSH5-201ENST00000375703 ARHGAP1Q07960 439 aa15.01□□□□□ -0.01
MSH5-201ENST00000375703 AP1B1Q10567 949 aa15.01□□□□□ -0.01
MSH5-201ENST00000375703 LAMC2Q13753 1193 aa15.01□□□□□ -0.01
MSH5-201ENST00000375703 C16orf46Q6P387 395 aa15.01□□□□□ -0.01
MSH5-201ENST00000375703 TMEM154Q6P9G4 183 aa15.01□□□□□ -0.01
MSH5-201ENST00000375703 DENND5BQ6ZUT9 1274 aa15.01□□□□□ -0.01
MSH5-201ENST00000375703 CENPIQ92674 756 aaPredicted RBP15.01□□□□□ -0.01
MSH5-201ENST00000375703 FAM136AQ96C01 138 aa15.01□□□□□ -0.01
MSH5-201ENST00000375703 QKIQ96PU8 341 aaKnown RBP eCLIP15.01□□□□□ -0.01
MSH5-201ENST00000375703 EBF4Q9BQW3 602 aa15.01□□□□□ -0.01
MSH5-201ENST00000375703 THTPAQ9BU02 230 aa15.01□□□□□ -0.01
MSH5-201ENST00000375703 SLC24A3Q9HC58 644 aa15.01□□□□□ -0.01
MSH5-201ENST00000375703 MTMR10Q9NXD2 777 aa15.01□□□□□ -0.01
MSH5-201ENST00000375703 DTLQ9NZJ0 730 aa15.01□□□□□ -0.01
MSH5-201ENST00000375703 LRCH1Q9Y2L9 728 aa15.01□□□□□ -0.01
MSH5-201ENST00000375703 NME7Q9Y5B8 376 aa15.01□□□□□ -0.01
MSH5-201ENST00000375703 PRR5-ARHGAP8B1AHC4 643 aa15.01□□□□□ -0.01
MSH5-201ENST00000375703 F8W8V4 182 aa15.01□□□□□ -0.01
MSH5-201ENST00000375703 PPEF2O14830 753 aa15.01□□□□□ -0.01
MSH5-201ENST00000375703 TM7SF2O76062 418 aa15.01□□□□□ -0.01
MSH5-201ENST00000375703 ATP5BP06576 529 aaKnown RBP15.01□□□□□ -0.01
MSH5-201ENST00000375703 LCP1P13796 627 aa15.01□□□□□ -0.01
MSH5-201ENST00000375703 MXRA7P84157 204 aa15.01□□□□□ -0.01
MSH5-201ENST00000375703 ARHGAP8P85298 464 aa15.01□□□□□ -0.01
MSH5-201ENST00000375703 TBCCQ15814 346 aa15.01□□□□□ -0.01
MSH5-201ENST00000375703 C6orf163Q5TEZ5 329 aa15.01□□□□□ -0.01
MSH5-201ENST00000375703 WDR75Q8IWA0 830 aaKnown RBP15.01□□□□□ -0.01
MSH5-201ENST00000375703 TFB1MQ8WVM0 346 aaKnown RBP15.01□□□□□ -0.01
MSH5-201ENST00000375703 HTR3CQ8WXA8 447 aa15.01□□□□□ -0.01
MSH5-201ENST00000375703 KCTD15Q96SI1 283 aaPredicted RBP15.01□□□□□ -0.01
MSH5-201ENST00000375703 A0A0G2JMZ2 1700 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms