RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 SEPT5Q99719 369 aaPredicted RBP6.73□□□□□ -1.33
SMC1A-202ENST00000375340 WDCPQ9H6R7 721 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 SAR1AQ9NR31 198 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 SYBUQ9NX95 663 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 RNF181Q9P0P0 153 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 ALS2Q96Q42 1657 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 SPTLC1O15269 473 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 SERPINE1P05121 402 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 CD48P09326 243 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 MLH1P40692 756 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 SNX31Q8N9S9 440 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 BLOC1S5Q8TDH9 187 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 HTR3CQ8WXA8 447 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 CPNE1Q99829 537 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 ECSITQ9BQ95 431 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 VPS33BQ9H267 617 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 NSMCE4AQ9NXX6 385 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 RNF112Q9ULX5 631 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 TIMM13Q9Y5L4 95 aaPredicted RBP6.72□□□□□ -1.33
SMC1A-202ENST00000375340 SRRM3A6NNA2 597 aaPredicted RBP6.72□□□□□ -1.33
SMC1A-202ENST00000375340 CYB561D2O14569 222 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 MAFGO15525 162 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 HBP1O60381 514 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 PARNO95453 639 aaKnown RBP6.72□□□□□ -1.33
SMC1A-202ENST00000375340 HSPA1AP0DMV8 641 aaKnown RBP6.72□□□□□ -1.33
SMC1A-202ENST00000375340 HSPA1BP0DMV9 641 aaKnown RBP6.72□□□□□ -1.33
SMC1A-202ENST00000375340 STMN1P16949 149 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 NELFEP18615 380 aaKnown RBP6.72□□□□□ -1.33
SMC1A-202ENST00000375340 PSMA4P25789 261 aaKnown RBP6.72□□□□□ -1.33
SMC1A-202ENST00000375340 PTPN7P35236 360 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 PTK2BQ14289 1009 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 CCDC81Q6ZN84 652 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 C11orf74Q86VG3 221 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 C10orf107Q8IVU9 208 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 ULK2Q8IYT8 1036 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 ULK4Q96C45 1275 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 PHF21BQ96EK2 531 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 TCF7L2Q9NQB0 619 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 HPS4Q9NQG7 708 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 PEX10O60683 326 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 ABHD2P08910 425 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 KCNK10P57789 538 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 SLC45A4Q5BKX6 768 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 THEMIS2Q5TEJ8 643 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 ZDHHC24Q6UX98 284 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 TSHZ1Q6ZSZ6 1077 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 TRABD2AQ86V40 505 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 CAB39LQ9H9S4 337 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 CASS4Q9NQ75 786 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 KCNK4Q9NYG8 393 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 BARX2Q9UMQ3 279 aaPredicted RBP6.72□□□□□ -1.33
SMC1A-202ENST00000375340 ARHGEF37A1IGU5 675 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 CHADO15335 359 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 LTFP02788 710 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 SNHG28P0DPA3 235 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 NOMO3P69849 1222 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 XRCC4Q13426 336 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 GRTP1Q5TC63 336 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 TNS4Q8IZW8 715 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 SH3TC2Q8TF17 1288 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 SHC3Q92529 594 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 MFSD14AQ96MC6 490 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.72□□□□□ -1.33
SMC1A-202ENST00000375340 PLA2G4CQ9UP65 541 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 TCRBV9S1A1TA0A576 114 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 CD4P01730 458 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 MPOP05164 745 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 ITGB5P18084 799 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 AGKQ53H12 422 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 PTAR1Q7Z6K3 402 aaPredicted RBP6.72□□□□□ -1.33
SMC1A-202ENST00000375340 KYQ8NBH2 561 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 RNF217Q8TC41 542 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 URGCPQ8TCY9 931 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 KCTD14Q9BQ13 255 aaPredicted RBP6.72□□□□□ -1.33
SMC1A-202ENST00000375340 CPB1P15086 417 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 NFKBIAP25963 317 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 DAB2P98082 770 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 KIAA1841Q6NSI8 718 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 APBA2Q99767 749 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 PHACTR1Q9C0D0 580 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 LRMDAQ9H2I8 198 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 FSCN2O14926 492 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 PHGDHO43175 533 aaKnown RBP6.72□□□□□ -1.33
SMC1A-202ENST00000375340 RHOBTB1O94844 696 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 TCF4P15884 667 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 XPAP23025 273 aaPredicted RBP6.72□□□□□ -1.33
SMC1A-202ENST00000375340 TM4SF1P30408 202 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 GDF10P55107 478 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 C6orf10Q5SRN2 563 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 LPCAT4Q643R3 524 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 KCNT2Q6UVM3 1135 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 C12orf29Q8N999 325 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 JOSD2Q8TAC2 188 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 TBL1YQ9BQ87 522 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 PORCNQ9H237 461 aa6.72□□□□□ -1.33
SMC1A-202ENST00000375340 CACYBPQ9HB71 228 aaKnown RBP6.72□□□□□ -1.33
SMC1A-202ENST00000375340 NKX1-2Q9UD57 310 aaPredicted RBP6.72□□□□□ -1.33
SMC1A-202ENST00000375340 APOC4-APOC2K7ER74 178 aa6.71□□□□□ -1.33
SMC1A-202ENST00000375340 APOC2P02655 101 aa6.71□□□□□ -1.33
SMC1A-202ENST00000375340 TAF6P49848 677 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms