RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 CYP4F11Q9HBI6 524 aa21.83■■□□□ 1.08
UPF3A-202ENST00000375299 MGAMO43451 1857 aa21.82■■□□□ 1.08
UPF3A-202ENST00000375299 ANK1P16157 1881 aa21.82■■□□□ 1.08
UPF3A-202ENST00000375299 A6NJR5 290 aa21.82■■□□□ 1.08
UPF3A-202ENST00000375299 PRPSAP2O60256 369 aa21.82■■□□□ 1.08
UPF3A-202ENST00000375299 GLRA3O75311 464 aa21.82■■□□□ 1.08
UPF3A-202ENST00000375299 HMGCRP04035 888 aa21.82■■□□□ 1.08
UPF3A-202ENST00000375299 VAV1P15498 845 aa21.82■■□□□ 1.08
UPF3A-202ENST00000375299 DPEP1P16444 411 aa21.82■■□□□ 1.08
UPF3A-202ENST00000375299 CHN2P52757 468 aa21.82■■□□□ 1.08
UPF3A-202ENST00000375299 CDH8P55286 799 aa21.82■■□□□ 1.08
UPF3A-202ENST00000375299 BCAR1P56945 870 aa21.82■■□□□ 1.08
UPF3A-202ENST00000375299 C15orf59Q2T9L4 293 aaPredicted RBP21.82■■□□□ 1.08
UPF3A-202ENST00000375299 PDPK2PQ6A1A2 396 aa21.82■■□□□ 1.08
UPF3A-202ENST00000375299 SATL1Q86VE3 508 aa21.82■■□□□ 1.08
UPF3A-202ENST00000375299 PQLC3Q8N755 202 aa21.82■■□□□ 1.08
UPF3A-202ENST00000375299 ANKRD36BP1Q96IX9 119 aa21.82■■□□□ 1.08
UPF3A-202ENST00000375299 BTBD9Q96Q07 612 aa21.82■■□□□ 1.08
UPF3A-202ENST00000375299 NDUFA13Q9P0J0 144 aa21.82■■□□□ 1.08
UPF3A-202ENST00000375299 SSX2IPQ9Y2D8 614 aa21.82■■□□□ 1.08
UPF3A-202ENST00000375299 M0QYV0 167 aa21.82■■□□□ 1.08
UPF3A-202ENST00000375299 AP1G1O43747 822 aa21.82■■□□□ 1.08
UPF3A-202ENST00000375299 PEX1O43933 1283 aa21.82■■□□□ 1.08
UPF3A-202ENST00000375299 LGR5O75473 907 aa21.82■■□□□ 1.08
UPF3A-202ENST00000375299 MYL4P12829 197 aa21.82■■□□□ 1.08
UPF3A-202ENST00000375299 ITGAXP20702 1163 aa21.82■■□□□ 1.08
UPF3A-202ENST00000375299 SERPINB6P35237 376 aa21.82■■□□□ 1.08
UPF3A-202ENST00000375299 IDH3AP50213 366 aa21.82■■□□□ 1.08
UPF3A-202ENST00000375299 PTPN11Q06124 597 aaPredicted RBP21.82■■□□□ 1.08
UPF3A-202ENST00000375299 PABPC1LQ4VXU2 614 aaKnown RBP21.82■■□□□ 1.08
UPF3A-202ENST00000375299 N4BP2L1Q5TBK1 243 aaPredicted RBP21.82■■□□□ 1.08
UPF3A-202ENST00000375299 SNRNP48Q6IEG0 339 aaKnown RBP21.82■■□□□ 1.08
UPF3A-202ENST00000375299 TRNP1Q6NT89 227 aa21.82■■□□□ 1.08
UPF3A-202ENST00000375299 UGT2A3Q6UWM9 527 aa21.82■■□□□ 1.08
UPF3A-202ENST00000375299 RXFP2Q8WXD0 754 aa21.82■■□□□ 1.08
UPF3A-202ENST00000375299 CMTM5Q96DZ9 223 aa21.82■■□□□ 1.08
UPF3A-202ENST00000375299 ACO2Q99798 780 aaKnown RBP21.82■■□□□ 1.08
UPF3A-202ENST00000375299 BCO2Q9BYV7 579 aa21.82■■□□□ 1.08
UPF3A-202ENST00000375299 TXNDC9O14530 226 aa21.81■■□□□ 1.08
UPF3A-202ENST00000375299 MAP3K6O95382 1288 aa21.81■■□□□ 1.08
UPF3A-202ENST00000375299 EGFRP00533 1210 aa21.81■■□□□ 1.08
UPF3A-202ENST00000375299 SERPINE1P05121 402 aa21.81■■□□□ 1.08
UPF3A-202ENST00000375299 SPATA31D3P0C874 917 aa21.81■■□□□ 1.08
UPF3A-202ENST00000375299 KCNA4P22459 653 aa21.81■■□□□ 1.08
UPF3A-202ENST00000375299 IL4RP24394 825 aa21.81■■□□□ 1.08
UPF3A-202ENST00000375299 PDK2Q15119 407 aa21.81■■□□□ 1.08
UPF3A-202ENST00000375299 TBC1D25Q3MII6 688 aa21.81■■□□□ 1.08
UPF3A-202ENST00000375299 FBXL19Q6PCT2 694 aa21.81■■□□□ 1.08
UPF3A-202ENST00000375299 SPATA31D4Q6ZUB0 917 aa21.81■■□□□ 1.08
UPF3A-202ENST00000375299 RSPH3Q86UC2 560 aa21.81■■□□□ 1.08
UPF3A-202ENST00000375299 DEFB107AQ8IZN7 70 aa21.81■■□□□ 1.08
UPF3A-202ENST00000375299 HIPK4Q8NE63 616 aa21.81■■□□□ 1.08
UPF3A-202ENST00000375299 ACMSDQ8TDX5 336 aa21.81■■□□□ 1.08
UPF3A-202ENST00000375299 NLRP4Q96MN2 994 aa21.81■■□□□ 1.08
UPF3A-202ENST00000375299 TWNKQ96RR1 684 aa21.81■■□□□ 1.08
UPF3A-202ENST00000375299 SHCBP1LQ9BZQ2 653 aa21.81■■□□□ 1.08
UPF3A-202ENST00000375299 PDGFDQ9GZP0 370 aaPredicted RBP21.81■■□□□ 1.08
UPF3A-202ENST00000375299 C2CD4BA6NLJ0 364 aa21.81■■□□□ 1.08
UPF3A-202ENST00000375299 ATP9BO43861 1147 aa21.81■■□□□ 1.08
UPF3A-202ENST00000375299 TPSB2P20231 275 aa21.81■■□□□ 1.08
UPF3A-202ENST00000375299 PCLAFQ15004 111 aa21.81■■□□□ 1.08
UPF3A-202ENST00000375299 TPSAB1Q15661 275 aa21.81■■□□□ 1.08
UPF3A-202ENST00000375299 CDO1Q16878 200 aa21.81■■□□□ 1.08
UPF3A-202ENST00000375299 ZNF667Q5HYK9 610 aa21.81■■□□□ 1.08
UPF3A-202ENST00000375299 C4orf22Q6V702 233 aa21.81■■□□□ 1.08
UPF3A-202ENST00000375299 ICA1LQ8NDH6 482 aa21.81■■□□□ 1.08
UPF3A-202ENST00000375299 PPP4R1Q8TF05 950 aa21.81■■□□□ 1.08
UPF3A-202ENST00000375299 PNPOQ9NVS9 261 aa21.81■■□□□ 1.08
UPF3A-202ENST00000375299 PLIN3O60664 434 aa21.8■■□□□ 1.08
UPF3A-202ENST00000375299 PENKP01210 267 aaPredicted RBP21.8■■□□□ 1.08
UPF3A-202ENST00000375299 PDGFRAP16234 1089 aa21.8■■□□□ 1.08
UPF3A-202ENST00000375299 EFNA5P52803 228 aa21.8■■□□□ 1.08
UPF3A-202ENST00000375299 SLC9A4Q6AI14 798 aa21.8■■□□□ 1.08
UPF3A-202ENST00000375299 HPS6Q86YV9 775 aa21.8■■□□□ 1.08
UPF3A-202ENST00000375299 FBXW8Q8N3Y1 598 aa21.8■■□□□ 1.08
UPF3A-202ENST00000375299 LRRN4Q8WUT4 740 aa21.8■■□□□ 1.08
UPF3A-202ENST00000375299 SORT1Q99523 831 aa21.8■■□□□ 1.08
UPF3A-202ENST00000375299 GPATCH2LQ9NWQ4 482 aa21.8■■□□□ 1.08
UPF3A-202ENST00000375299 MOCS1Q9NZB8 636 aa21.8■■□□□ 1.08
UPF3A-202ENST00000375299 HMGXB4Q9UGU5 601 aa21.8■■□□□ 1.08
UPF3A-202ENST00000375299 PHF24Q9UPV7 400 aa21.8■■□□□ 1.08
UPF3A-202ENST00000375299 H3BNX3 289 aa21.8■■□□□ 1.08
UPF3A-202ENST00000375299 METTL18O95568 372 aa21.8■■□□□ 1.08
UPF3A-202ENST00000375299 KRT19P08727 400 aa21.8■■□□□ 1.08
UPF3A-202ENST00000375299 ALOX15P16050 662 aaPredicted RBP21.8■■□□□ 1.08
UPF3A-202ENST00000375299 GPD2P43304 727 aa21.8■■□□□ 1.08
UPF3A-202ENST00000375299 MAP7Q14244 749 aa21.8■■□□□ 1.08
UPF3A-202ENST00000375299 TCHHL1Q5QJ38 904 aaPredicted RBP21.8■■□□□ 1.08
UPF3A-202ENST00000375299 ELOVL4Q9GZR5 314 aa21.8■■□□□ 1.08
UPF3A-202ENST00000375299 IRAK4Q9NWZ3 460 aa21.8■■□□□ 1.08
UPF3A-202ENST00000375299 C15orf38-AP3S2A0A0A6YYH1 394 aa21.79■■□□□ 1.08
UPF3A-202ENST00000375299 OR6B1O95007 311 aa21.79■■□□□ 1.08
UPF3A-202ENST00000375299 SMIM18P0DKX4 95 aa21.79■■□□□ 1.08
UPF3A-202ENST00000375299 RANBP1P43487 201 aa21.79■■□□□ 1.08
UPF3A-202ENST00000375299 FOLH1Q04609 750 aa21.79■■□□□ 1.08
UPF3A-202ENST00000375299 TBL3Q12788 808 aaKnown RBP21.79■■□□□ 1.08
UPF3A-202ENST00000375299 TNFAIP1Q13829 316 aa21.79■■□□□ 1.08
UPF3A-202ENST00000375299 R3HDM1Q15032 1099 aaKnown RBP21.79■■□□□ 1.08
UPF3A-202ENST00000375299 TARBP2Q15633 366 aaKnown RBP21.79■■□□□ 1.08
UPF3A-202ENST00000375299 GRAMD1BQ3KR37 738 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms