RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 C2CD6Q53TS8 623 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 C12orf60Q5U649 245 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 C3orf67Q6ZVT6 689 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 C16orf62Q7Z3J2 963 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 TTC30BQ8N4P2 665 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 ACSF2Q96CM8 615 aaPredicted RBP10.53□□□□□ -0.72
CD28-202ENST00000374481 BFARQ9NZS9 450 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 DUX4Q9UBX2 424 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 ATPIF1Q9UII2 106 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 PIK3C2BO00750 1634 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 NCANO14594 1321 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 METP08581 1390 aa10.52□□□□□ -0.72
CD28-202ENST00000374481 PNMA6FA0A0J9YX94 578 aa10.52□□□□□ -0.72
CD28-202ENST00000374481 KBTBD13C9JR72 458 aa10.52□□□□□ -0.72
CD28-202ENST00000374481 SNAP91O60641 907 aa10.52□□□□□ -0.72
CD28-202ENST00000374481 BMP10O95393 424 aa10.52□□□□□ -0.72
CD28-202ENST00000374481 KCNA6P17658 529 aa10.52□□□□□ -0.72
CD28-202ENST00000374481 SPRP35270 261 aaPredicted RBP10.52□□□□□ -0.72
CD28-202ENST00000374481 ARL4AP40617 200 aa10.52□□□□□ -0.72
CD28-202ENST00000374481 ADGRE1Q14246 886 aa10.52□□□□□ -0.72
CD28-202ENST00000374481 AGKQ53H12 422 aa10.52□□□□□ -0.72
CD28-202ENST00000374481 GLRA4Q5JXX5 417 aa10.52□□□□□ -0.72
CD28-202ENST00000374481 DNAJC10Q8IXB1 793 aa10.52□□□□□ -0.72
CD28-202ENST00000374481 LNX1Q8TBB1 728 aaPredicted RBP10.52□□□□□ -0.72
CD28-202ENST00000374481 GDAP2Q9NXN4 497 aa10.52□□□□□ -0.72
CD28-202ENST00000374481 CD163L1Q9NR16 1453 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 TMEM191CA6NGB0 347 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 FOXD2O60548 495 aaPredicted RBP10.52□□□□□ -0.73
CD28-202ENST00000374481 CCNT2O60583 730 aaKnown RBP10.52□□□□□ -0.73
CD28-202ENST00000374481 PHKG2P15735 406 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 TCEA1P23193 301 aaKnown RBP10.52□□□□□ -0.73
CD28-202ENST00000374481 PTGIRP43119 386 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 PLIN5Q00G26 463 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 ATAD3BQ5T9A4 648 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 HEATR6Q6AI08 1181 aaKnown RBP10.52□□□□□ -0.73
CD28-202ENST00000374481 C4orf22Q6V702 233 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 HM13Q8TCT9 377 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 KBTBD7Q8WVZ9 684 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 NRG4Q8WWG1 115 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 TCF12Q99081 682 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 MIPEPQ99797 713 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 WDR11Q9BZH6 1224 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 SLC38A10Q9HBR0 1119 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 EML4Q9HC35 981 aaKnown RBP10.52□□□□□ -0.73
CD28-202ENST00000374481 DNPEPQ9ULA0 475 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 SYNPO2Q9UMS6 1093 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 RGSL1A5PLK6 1076 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 BTBD19C9JJ37 291 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 INPP4BO15327 924 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 ZC3H11AO75152 810 aaKnown RBP eCLIP10.52□□□□□ -0.73
CD28-202ENST00000374481 HLA-DPA1P20036 260 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 NME5P56597 212 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 ECT2LQ008S8 904 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 PRKG1Q13976 671 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 EPHA7Q15375 998 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 ASTE1Q2TB18 679 aaPredicted RBP10.52□□□□□ -0.73
CD28-202ENST00000374481 MTX3Q5HYI7 312 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 SAMD4BQ5PRF9 694 aaKnown RBP10.52□□□□□ -0.73
CD28-202ENST00000374481 FAXCQ5TGI0 409 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 OR6B2Q6IFH4 312 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 SDE2Q6IQ49 451 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 USP17L6PQ6QN14 398 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 DPP8Q6V1X1 898 aaPredicted RBP10.52□□□□□ -0.73
CD28-202ENST00000374481 PAGE2Q7Z2X7 111 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 IRGQQ8WZA9 623 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 AGAP3Q96P47 875 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 BDH2Q9BUT1 245 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 AMNQ9BXJ7 453 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 KMT5AQ9NQR1 393 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 AVENQ9NQS1 362 aaPredicted RBP10.52□□□□□ -0.73
CD28-202ENST00000374481 CCDC59Q9P031 241 aaKnown RBP10.52□□□□□ -0.73
CD28-202ENST00000374481 CEMIPQ8WUJ3 1361 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 CCDC182A6NF36 153 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 USP17L15C9J2P7 530 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 USP17L13C9JLJ4 530 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 USP17L11C9JVI0 530 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 USP17L18D6R9N7 530 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 USP17L22D6RA61 530 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 USP17L17D6RBQ6 530 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 USP17L19D6RCP7 530 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 USP17L20D6RJB6 530 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 PROSCO94903 275 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 IL5RAQ01344 420 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 USP17L24Q0WX57 530 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 KYAT3Q6YP21 454 aaKnown RBP10.52□□□□□ -0.73
CD28-202ENST00000374481 ZNF410Q86VK4 478 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 SEPT8Q92599 483 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 SLC35C1Q96A29 364 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 BIRC8Q96P09 236 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 STN1Q9H668 368 aaKnown RBP10.52□□□□□ -0.73
CD28-202ENST00000374481 ACSS3Q9H6R3 686 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 CCSER2Q9H7U1 834 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 LRRC4CQ9HCJ2 640 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 NRKQ7Z2Y5 1582 aa10.52□□□□□ -0.73
CD28-202ENST00000374481 MYOCOSA0A1B0GUC4 107 aa10.51□□□□□ -0.73
CD28-202ENST00000374481 KRT20P35900 424 aa10.51□□□□□ -0.73
CD28-202ENST00000374481 PEX3P56589 373 aa10.51□□□□□ -0.73
CD28-202ENST00000374481 ABCE1P61221 599 aaKnown RBP10.51□□□□□ -0.73
CD28-202ENST00000374481 MMRN1Q13201 1228 aa10.51□□□□□ -0.73
CD28-202ENST00000374481 TTLL12Q14166 644 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms