RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 UBASH3AP57075 661 aa12.52□□□□□ -0.41
HDAC8-201ENST00000373554 ZNF445P59923 1031 aa12.52□□□□□ -0.41
HDAC8-201ENST00000373554 FMO1Q01740 532 aa12.52□□□□□ -0.41
HDAC8-201ENST00000373554 SLC6A3Q01959 620 aa12.52□□□□□ -0.41
HDAC8-201ENST00000373554 GAS6Q14393 721 aa12.52□□□□□ -0.41
HDAC8-201ENST00000373554 NR1I3Q14994 352 aa12.52□□□□□ -0.41
HDAC8-201ENST00000373554 TAF5Q15542 800 aa12.52□□□□□ -0.41
HDAC8-201ENST00000373554 DCAF6Q58WW2 860 aa12.52□□□□□ -0.41
HDAC8-201ENST00000373554 SYPL2Q5VXT5 272 aa12.52□□□□□ -0.41
HDAC8-201ENST00000373554 LRSAM1Q6UWE0 723 aa12.52□□□□□ -0.41
HDAC8-201ENST00000373554 MAMSTRQ6ZN01 415 aa12.52□□□□□ -0.41
HDAC8-201ENST00000373554 NUDT18Q6ZVK8 323 aa12.52□□□□□ -0.41
HDAC8-201ENST00000373554 SLC26A9Q7LBE3 791 aa12.52□□□□□ -0.41
HDAC8-201ENST00000373554 C12orf40Q86WS4 652 aa12.52□□□□□ -0.41
HDAC8-201ENST00000373554 ETFBKMTQ8IXQ9 262 aa12.52□□□□□ -0.41
HDAC8-201ENST00000373554 NAT16Q8N8M0 369 aa12.52□□□□□ -0.41
HDAC8-201ENST00000373554 BHMTQ93088 406 aa12.52□□□□□ -0.41
HDAC8-201ENST00000373554 ACDQ96AP0 544 aa12.52□□□□□ -0.41
HDAC8-201ENST00000373554 C18orf8Q96DM3 657 aa12.52□□□□□ -0.41
HDAC8-201ENST00000373554 NAP1L5Q96NT1 182 aaPredicted RBP12.52□□□□□ -0.41
HDAC8-201ENST00000373554 SLC2A13Q96QE2 648 aa12.52□□□□□ -0.41
HDAC8-201ENST00000373554 FAM204AQ9H8W3 233 aa12.52□□□□□ -0.41
HDAC8-201ENST00000373554 PRMT8Q9NR22 394 aaPredicted RBP12.52□□□□□ -0.41
HDAC8-201ENST00000373554 SEPT11Q9NVA2 429 aaKnown RBP12.52□□□□□ -0.41
HDAC8-201ENST00000373554 DNAJC17Q9NVM6 304 aaKnown RBP12.52□□□□□ -0.41
HDAC8-201ENST00000373554 IRAK2O43187 625 aa12.51□□□□□ -0.41
HDAC8-201ENST00000373554 DAB1O75553 588 aa12.51□□□□□ -0.41
HDAC8-201ENST00000373554 GRAP2O75791 330 aa12.51□□□□□ -0.41
HDAC8-201ENST00000373554 TRUB2O95900 331 aaKnown RBP12.51□□□□□ -0.41
HDAC8-201ENST00000373554 APOEP02649 317 aa12.51□□□□□ -0.41
HDAC8-201ENST00000373554 SP9P0CG40 484 aa12.51□□□□□ -0.41
HDAC8-201ENST00000373554 SCNN1AP37088 669 aa12.51□□□□□ -0.41
HDAC8-201ENST00000373554 GRIA2P42262 883 aa12.51□□□□□ -0.41
HDAC8-201ENST00000373554 GABRB2P47870 512 aa12.51□□□□□ -0.41
HDAC8-201ENST00000373554 SLC6A11P48066 632 aa12.51□□□□□ -0.41
HDAC8-201ENST00000373554 CDK17Q00537 523 aa12.51□□□□□ -0.41
HDAC8-201ENST00000373554 CSTF1Q05048 431 aaKnown RBP12.51□□□□□ -0.41
HDAC8-201ENST00000373554 ZNF528Q3MIS6 628 aa12.51□□□□□ -0.41
HDAC8-201ENST00000373554 ADGRF1Q5T601 910 aa12.51□□□□□ -0.41
HDAC8-201ENST00000373554 FAM102AQ5T9C2 384 aaPredicted RBP12.51□□□□□ -0.41
HDAC8-201ENST00000373554 GRAMD4Q6IC98 578 aa12.51□□□□□ -0.41
HDAC8-201ENST00000373554 ZC3H14Q6PJT7 736 aaKnown RBP12.51□□□□□ -0.41
HDAC8-201ENST00000373554 FAM217AQ8IXS0 508 aa12.51□□□□□ -0.41
HDAC8-201ENST00000373554 MAML2Q8IZL2 1156 aaPredicted RBP12.51□□□□□ -0.41
HDAC8-201ENST00000373554 DEFB106AQ8N104 65 aa12.51□□□□□ -0.41
HDAC8-201ENST00000373554 ZNF397Q8NF99 534 aaPredicted RBP12.51□□□□□ -0.41
HDAC8-201ENST00000373554 ADAM32Q8TC27 787 aa12.51□□□□□ -0.41
HDAC8-201ENST00000373554 DDI1Q8WTU0 396 aa12.51□□□□□ -0.41
HDAC8-201ENST00000373554 CPA5Q8WXQ8 436 aa12.51□□□□□ -0.41
HDAC8-201ENST00000373554 EZH1Q92800 747 aaPredicted RBP12.51□□□□□ -0.41
HDAC8-201ENST00000373554 FAM86C1Q9NVL1 165 aa12.51□□□□□ -0.41
HDAC8-201ENST00000373554 DDIT4Q9NX09 232 aa12.51□□□□□ -0.41
HDAC8-201ENST00000373554 STOML2Q9UJZ1 356 aa12.51□□□□□ -0.41
HDAC8-201ENST00000373554 STAP1Q9ULZ2 295 aa12.51□□□□□ -0.41
HDAC8-201ENST00000373554 KIAA1549LQ6ZVL6 1849 aa12.51□□□□□ -0.41
HDAC8-201ENST00000373554 FAM170AA1A519 330 aa12.5□□□□□ -0.41
HDAC8-201ENST00000373554 TBC1D3BA6NDS4 549 aa12.5□□□□□ -0.41
HDAC8-201ENST00000373554 LRRC53A6NM62 1247 aa12.5□□□□□ -0.41
HDAC8-201ENST00000373554 CHURC1-FNTBB4DL54 471 aa12.5□□□□□ -0.41
HDAC8-201ENST00000373554 PENKP01210 267 aaPredicted RBP12.5□□□□□ -0.41
HDAC8-201ENST00000373554 IGLV3-25P01717 112 aa12.5□□□□□ -0.41
HDAC8-201ENST00000373554 CYP1A1P04798 512 aaPredicted RBP12.5□□□□□ -0.41
HDAC8-201ENST00000373554 CHRNB2P17787 502 aa12.5□□□□□ -0.41
HDAC8-201ENST00000373554 GBP1P32455 592 aa12.5□□□□□ -0.41
HDAC8-201ENST00000373554 NSFP46459 744 aaKnown RBP12.5□□□□□ -0.41
HDAC8-201ENST00000373554 DGKGP49619 791 aa12.5□□□□□ -0.41
HDAC8-201ENST00000373554 SEC13P55735 322 aa12.5□□□□□ -0.41
HDAC8-201ENST00000373554 SATB1Q01826 763 aa12.5□□□□□ -0.41
HDAC8-201ENST00000373554 ASIC2Q16515 512 aa12.5□□□□□ -0.41
HDAC8-201ENST00000373554 MPPE1Q53F39 396 aa12.5□□□□□ -0.41
HDAC8-201ENST00000373554 FIGNQ5HY92 759 aa12.5□□□□□ -0.41
HDAC8-201ENST00000373554 TSSK4Q6SA08 328 aa12.5□□□□□ -0.41
HDAC8-201ENST00000373554 XYLT1Q86Y38 959 aa12.5□□□□□ -0.41
HDAC8-201ENST00000373554 TERB1Q8NA31 727 aa12.5□□□□□ -0.41
HDAC8-201ENST00000373554 RPLP0P6Q8NHW5 317 aa12.5□□□□□ -0.41
HDAC8-201ENST00000373554 BAP1Q92560 729 aa12.5□□□□□ -0.41
HDAC8-201ENST00000373554 IQCDQ96DY2 449 aa12.5□□□□□ -0.41
HDAC8-201ENST00000373554 FCRL2Q96LA5 508 aaPredicted RBP12.5□□□□□ -0.41
HDAC8-201ENST00000373554 DDX50Q9BQ39 737 aaKnown RBP12.5□□□□□ -0.41
HDAC8-201ENST00000373554 NUP58Q9BVL2 599 aa12.5□□□□□ -0.41
HDAC8-201ENST00000373554 FAM126AQ9BYI3 521 aaPredicted RBP12.5□□□□□ -0.41
HDAC8-201ENST00000373554 EDEM3Q9BZQ6 932 aa12.5□□□□□ -0.41
HDAC8-201ENST00000373554 RRN3Q9NYV6 651 aa12.5□□□□□ -0.41
HDAC8-201ENST00000373554 PLK2Q9NYY3 685 aa12.5□□□□□ -0.41
HDAC8-201ENST00000373554 IFNKQ9P0W0 207 aa12.5□□□□□ -0.41
HDAC8-201ENST00000373554 WDFY4Q6ZS81 3184 aa12.5□□□□□ -0.41
HDAC8-201ENST00000373554 CACNA1HO95180 2353 aa12.49□□□□□ -0.41
HDAC8-201ENST00000373554 SYNJ2BP-COX16A0A087WUM0 186 aa12.49□□□□□ -0.41
HDAC8-201ENST00000373554 TYW5A2RUC4 315 aaKnown RBP12.49□□□□□ -0.41
HDAC8-201ENST00000373554 GOLGA8SH3BPF8 625 aa12.49□□□□□ -0.41
HDAC8-201ENST00000373554 K7EQS6 105 aa12.49□□□□□ -0.41
HDAC8-201ENST00000373554 ACSL4O60488 711 aa12.49□□□□□ -0.41
HDAC8-201ENST00000373554 PAPSS2O95340 614 aaPredicted RBP12.49□□□□□ -0.41
HDAC8-201ENST00000373554 MOCS2O96007 188 aaPredicted RBP12.49□□□□□ -0.41
HDAC8-201ENST00000373554 SLC2A3P11169 496 aa12.49□□□□□ -0.41
HDAC8-201ENST00000373554 MMP8P22894 467 aa12.49□□□□□ -0.41
HDAC8-201ENST00000373554 CCR1P32246 355 aa12.49□□□□□ -0.41
HDAC8-201ENST00000373554 NOS2P35228 1153 aa12.49□□□□□ -0.41
HDAC8-201ENST00000373554 MATKP42679 507 aa12.49□□□□□ -0.41
HDAC8-201ENST00000373554 NRLP54845 237 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms