RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 GOT1P17174 413 aa21.29■■□□□ 1
VEGFA-204ENST00000372064 LRPAP1P30533 357 aa21.29■■□□□ 1
VEGFA-204ENST00000372064 OTUD1Q5VV17 481 aaPredicted RBP21.29■■□□□ 1
VEGFA-204ENST00000372064 NT5C3BQ969T7 300 aa21.29■■□□□ 1
VEGFA-204ENST00000372064 CENPFP49454 3210 aa21.29■■□□□ 1
VEGFA-204ENST00000372064 HACD1B0YJ81 288 aa21.28■■□□□ 1
VEGFA-204ENST00000372064 ATP5HO75947 161 aa21.28■■□□□ 1
VEGFA-204ENST00000372064 HOXC8P31273 242 aa21.28■■□□□ 1
VEGFA-204ENST00000372064 HUNKP57058 714 aa21.28■■□□□ 1
VEGFA-204ENST00000372064 FSCN1Q16658 493 aaKnown RBP21.28■■□□□ 1
VEGFA-204ENST00000372064 FYB2Q5VWT5 728 aa21.28■■□□□ 1
VEGFA-204ENST00000372064 WSCD1Q658N2 575 aa21.28■■□□□ 1
VEGFA-204ENST00000372064 UNC5AQ6ZN44 842 aa21.28■■□□□ 1
VEGFA-204ENST00000372064 APBB2Q92870 758 aa21.28■■□□□ 1
VEGFA-204ENST00000372064 WDR91A4D1P6 747 aa21.28■■□□□ 1
VEGFA-204ENST00000372064 C2CD2LO14523 706 aa21.28■■□□□ 1
VEGFA-204ENST00000372064 CYB561D2O14569 222 aa21.28■■□□□ 1
VEGFA-204ENST00000372064 KRT16P08779 473 aa21.28■■□□□ 1
VEGFA-204ENST00000372064 SULT1E1P49888 294 aa21.28■■□□□ 1
VEGFA-204ENST00000372064 PURAQ00577 322 aaKnown RBP21.28■■□□□ 1
VEGFA-204ENST00000372064 PAQR9Q6ZVX9 377 aa21.28■■□□□ 1
VEGFA-204ENST00000372064 NME8Q8N427 588 aa21.28■■□□□ 1
VEGFA-204ENST00000372064 KIF2BQ8N4N8 673 aa21.28■■□□□ 1
VEGFA-204ENST00000372064 PPM1NQ8N819 430 aa21.28■■□□□ 1
VEGFA-204ENST00000372064 PTPRN2Q92932 1015 aa21.28■■□□□ 1
VEGFA-204ENST00000372064 EBNA1BP2Q99848 306 aaKnown RBP21.28■■□□□ 1
VEGFA-204ENST00000372064 KATNAL1Q9BW62 490 aa21.28■■□□□ 1
VEGFA-204ENST00000372064 SMYD2Q9NRG4 433 aa21.28■■□□□ 1
VEGFA-204ENST00000372064 TRIM33Q9UPN9 1127 aa21.28■■□□□ 1
VEGFA-204ENST00000372064 FAM163BP0C2L3 166 aa21.28■■□□□ 1
VEGFA-204ENST00000372064 HEATR6Q6AI08 1181 aaKnown RBP21.28■■□□□ 1
VEGFA-204ENST00000372064 KCTD13Q8WZ19 329 aa21.28■■□□□ 1
VEGFA-204ENST00000372064 RRAGCQ9HB90 399 aa21.28■■□□□ 1
VEGFA-204ENST00000372064 XAB2Q9HCS7 855 aaKnown RBP21.28■■□□□ 1
VEGFA-204ENST00000372064 TMPRSS4Q9NRS4 437 aa21.28■■□□□ 1
VEGFA-204ENST00000372064 KRT37O76014 449 aa21.27■■□□□ 1
VEGFA-204ENST00000372064 SNRPAP09012 282 aaKnown RBP21.27■■□□□ 1
VEGFA-204ENST00000372064 NDUFV1P49821 464 aa21.27■■□□□ 1
VEGFA-204ENST00000372064 DCAF6Q58WW2 860 aa21.27■■□□□ 1
VEGFA-204ENST00000372064 TFB1MQ8WVM0 346 aaKnown RBP21.27■■□□□ 1
VEGFA-204ENST00000372064 SYNJ2BP-COX16A0A087WUM0 186 aa21.27■■□□□ 1
VEGFA-204ENST00000372064 MYADML2A6NDP7 307 aa21.27■■□□□ 1
VEGFA-204ENST00000372064 TRIM49D1C9J1S8 452 aa21.27■■□□□ 1
VEGFA-204ENST00000372064 RARBP10826 455 aa21.27■■□□□ 1
VEGFA-204ENST00000372064 VAV1P15498 845 aa21.27■■□□□ 1
VEGFA-204ENST00000372064 PTPN1P18031 435 aaKnown RBP21.27■■□□□ 1
VEGFA-204ENST00000372064 SLC8A1P32418 973 aa21.27■■□□□ 1
VEGFA-204ENST00000372064 ARL4AP40617 200 aa21.27■■□□□ 1
VEGFA-204ENST00000372064 MRPS5P82675 430 aaKnown RBP21.27■■□□□ 1
VEGFA-204ENST00000372064 CTAGE3PQ8IX95 158 aa21.27■■□□□ 1
VEGFA-204ENST00000372064 GSDMBQ8TAX9 411 aa21.27■■□□□ 1
VEGFA-204ENST00000372064 HTR3CQ8WXA8 447 aa21.27■■□□□ 1
VEGFA-204ENST00000372064 PPP1R10Q96QC0 940 aaKnown RBP21.27■■□□□ 1
VEGFA-204ENST00000372064 COX16Q9P0S2 106 aa21.27■■□□□ 1
VEGFA-204ENST00000372064 FAM159BA6NKW6 160 aa21.26■□□□□ 0.99
VEGFA-204ENST00000372064 IL1BP01584 269 aa21.26■□□□□ 0.99
VEGFA-204ENST00000372064 NPR3P17342 541 aa21.26■□□□□ 0.99
VEGFA-204ENST00000372064 CCNFP41002 786 aa21.26■□□□□ 0.99
VEGFA-204ENST00000372064 PLEKHG4Q58EX7 1191 aa21.26■□□□□ 0.99
VEGFA-204ENST00000372064 KIAA0319Q5VV43 1072 aa21.26■□□□□ 0.99
VEGFA-204ENST00000372064 BZW1Q7L1Q6 419 aaKnown RBP21.26■□□□□ 0.99
VEGFA-204ENST00000372064 NETO2Q8NC67 525 aa21.26■□□□□ 0.99
VEGFA-204ENST00000372064 FAM111AQ96PZ2 611 aa21.26■□□□□ 0.99
VEGFA-204ENST00000372064 TRIM56Q9BRZ2 755 aaKnown RBP21.26■□□□□ 0.99
VEGFA-204ENST00000372064 LRMDAQ9H2I8 198 aa21.26■□□□□ 0.99
VEGFA-204ENST00000372064 NPHS2Q9NP85 383 aa21.26■□□□□ 0.99
VEGFA-204ENST00000372064 ARHGEF4Q9NR80 690 aa21.26■□□□□ 0.99
VEGFA-204ENST00000372064 MKS1Q9NXB0 559 aa21.26■□□□□ 0.99
VEGFA-204ENST00000372064 Q9Y3F1 56 aa21.26■□□□□ 0.99
VEGFA-204ENST00000372064 GABRDO14764 452 aa21.26■□□□□ 0.99
VEGFA-204ENST00000372064 TROVE2P10155 538 aaKnown RBP eCLIP21.26■□□□□ 0.993e-17■■■□□ 18.6
VEGFA-204ENST00000372064 GNAT1P11488 350 aa21.26■□□□□ 0.99
VEGFA-204ENST00000372064 GTF2A1P52655 376 aaPredicted RBP21.26■□□□□ 0.99
VEGFA-204ENST00000372064 WLSQ5T9L3 541 aa21.26■□□□□ 0.99
VEGFA-204ENST00000372064 MPP5Q8N3R9 675 aa21.26■□□□□ 0.99
VEGFA-204ENST00000372064 NPY6RQ99463 290 aa21.26■□□□□ 0.99
VEGFA-204ENST00000372064 BAIAP2L1Q9UHR4 511 aa21.26■□□□□ 0.99
VEGFA-204ENST00000372064 A0A0A0MRY4 1105 aa21.25■□□□□ 0.99
VEGFA-204ENST00000372064 NOS2P35228 1153 aa21.25■□□□□ 0.99
VEGFA-204ENST00000372064 AFF1P51825 1210 aaKnown RBP21.25■□□□□ 0.99
VEGFA-204ENST00000372064 RABGGTBP53611 331 aa21.25■□□□□ 0.99
VEGFA-204ENST00000372064 SLC8A3P57103 927 aa21.25■□□□□ 0.99
VEGFA-204ENST00000372064 LGSNQ5TDP6 509 aa21.25■□□□□ 0.99
VEGFA-204ENST00000372064 NLRP9Q7RTR0 991 aa21.25■□□□□ 0.99
VEGFA-204ENST00000372064 HACE1Q8IYU2 909 aa21.25■□□□□ 0.99
VEGFA-204ENST00000372064 SPATA13Q96N96 652 aa21.25■□□□□ 0.99
VEGFA-204ENST00000372064 KANSL3Q9P2N6 904 aa21.25■□□□□ 0.99
VEGFA-204ENST00000372064 PCDHA11Q9Y5I1 949 aa21.25■□□□□ 0.99
VEGFA-204ENST00000372064 SF3B1O75533 1304 aaKnown RBP eCLIP21.25■□□□□ 0.996e-7■■■■■ 31.1
VEGFA-204ENST00000372064 TSC2P49815 1807 aa21.25■□□□□ 0.99
VEGFA-204ENST00000372064 GRIA1P42261 906 aa21.25■□□□□ 0.99
VEGFA-204ENST00000372064 PRKD1Q15139 912 aaPredicted RBP21.25■□□□□ 0.99
VEGFA-204ENST00000372064 MDH1BQ5I0G3 518 aa21.25■□□□□ 0.99
VEGFA-204ENST00000372064 ANKRD20A2Q5SQ80 823 aa21.25■□□□□ 0.99
VEGFA-204ENST00000372064 ANKRD20A1Q5TYW2 823 aa21.25■□□□□ 0.99
VEGFA-204ENST00000372064 ANKRD20A3Q5VUR7 823 aa21.25■□□□□ 0.99
VEGFA-204ENST00000372064 CLEC20AQ6ZU45 233 aa21.25■□□□□ 0.99
VEGFA-204ENST00000372064 CYS1Q717R9 158 aa21.25■□□□□ 0.99
VEGFA-204ENST00000372064 MTBPQ96DY7 904 aa21.25■□□□□ 0.99
VEGFA-204ENST00000372064 SLC2A13Q96QE2 648 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms