RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 SAPCD2Q86UD0 394 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 IPMKQ8NFU5 416 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 CHID1Q9BWS9 393 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 C12orf65Q9H3J6 166 aaKnown RBP13.03□□□□□ -0.32
GPC4-201ENST00000370828 EPS8L2Q9H6S3 715 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 CEMIPQ8WUJ3 1361 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 KANSL1LA0AUZ9 987 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 RAD51BO15315 384 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 TRIM13O60858 407 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 FCGR1AP12314 374 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 COX4I1P13073 169 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 TTKP33981 857 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 ETFBP38117 255 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 CCT3P49368 545 aaKnown RBP13.03□□□□□ -0.32
GPC4-201ENST00000370828 CYP51A1Q16850 503 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 IRF2BP2Q7Z5L9 587 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 LDHDQ86WU2 507 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 UBASH3BQ8TF42 649 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 DLG3Q92796 817 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 PHF21AQ96BD5 680 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 OTULINQ96BN8 352 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 PHF12Q96QT6 1004 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 APOL2Q9BQE5 337 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 SYT15Q9BQS2 421 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 EBF3Q9H4W6 596 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 IARS2Q9NSE4 1012 aaKnown RBP13.03□□□□□ -0.32
GPC4-201ENST00000370828 MED26O95402 600 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 LDLRP01130 860 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 ATF4P18848 351 aaPredicted RBP13.03□□□□□ -0.32
GPC4-201ENST00000370828 CIAPIN1Q6FI81 312 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 C16orf86Q6ZW13 317 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 LRRC8DQ7L1W4 858 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 PQLC1Q8N2U9 271 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 POC5Q8NA72 575 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 TBC1D16Q8TBP0 767 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 DCUN1D1Q96GG9 259 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 MARK4Q96L34 752 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 RHOBTB2Q9BYZ6 727 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 FRMD8P1Q9BZ68 369 aaPredicted RBP13.03□□□□□ -0.32
GPC4-201ENST00000370828 LRRC19Q9H756 370 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 TRIM45Q9H8W5 580 aaPredicted RBP13.03□□□□□ -0.32
GPC4-201ENST00000370828 AFF4Q9UHB7 1163 aaKnown RBP13.03□□□□□ -0.32
GPC4-201ENST00000370828 SLCO1B7G3V0H7 640 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 CNTFP26441 200 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 CRKP46108 304 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 PCSK7Q16549 785 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 CARTPTQ16568 116 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 ACSBG2Q5FVE4 666 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 SLC30A10Q6XR72 485 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 FAXDC2Q96IV6 333 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 COX4I2Q96KJ9 171 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 CNPY3Q9BT09 278 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 NIF3L1Q9GZT8 377 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 PRKAG3Q9UGI9 489 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 PDZK1P1A8MUH7 402 aa13.02□□□□□ -0.32
GPC4-201ENST00000370828 PEX11AO75192 247 aa13.02□□□□□ -0.32
GPC4-201ENST00000370828 H2AFYO75367 372 aaKnown RBP13.02□□□□□ -0.32
GPC4-201ENST00000370828 TNFAIP1Q13829 316 aa13.02□□□□□ -0.32
GPC4-201ENST00000370828 ACAP2Q15057 778 aa13.02□□□□□ -0.32
GPC4-201ENST00000370828 ADGRA1Q86SQ6 560 aa13.02□□□□□ -0.32
GPC4-201ENST00000370828 MAGEE2Q8TD90 523 aaPredicted RBP13.02□□□□□ -0.32
GPC4-201ENST00000370828 TFB1MQ8WVM0 346 aaKnown RBP13.02□□□□□ -0.32
GPC4-201ENST00000370828 L3MBTL3Q96JM7 780 aaPredicted RBP13.02□□□□□ -0.32
GPC4-201ENST00000370828 TDRD3Q9H7E2 651 aaKnown RBP13.02□□□□□ -0.32
GPC4-201ENST00000370828 TMEM161AQ9NX61 479 aa13.02□□□□□ -0.32
GPC4-201ENST00000370828 CACNA2D2Q9NY47 1150 aa13.02□□□□□ -0.32
GPC4-201ENST00000370828 GPRC5DQ9NZD1 345 aa13.02□□□□□ -0.32
GPC4-201ENST00000370828 TBX20Q9UMR3 447 aa13.02□□□□□ -0.32
GPC4-201ENST00000370828 NDUFB10O96000 172 aa13.02□□□□□ -0.32
GPC4-201ENST00000370828 FASTKQ14296 549 aaKnown RBP13.02□□□□□ -0.32
GPC4-201ENST00000370828 PDK1Q15118 436 aa13.02□□□□□ -0.32
GPC4-201ENST00000370828 BOLA3Q53S33 107 aa13.02□□□□□ -0.32
GPC4-201ENST00000370828 HGSNATQ68CP4 663 aa13.02□□□□□ -0.32
GPC4-201ENST00000370828 C4orf22Q6V702 233 aa13.02□□□□□ -0.32
GPC4-201ENST00000370828 PSMA8Q8TAA3 256 aa13.02□□□□□ -0.32
GPC4-201ENST00000370828 RNF145Q96MT1 663 aa13.02□□□□□ -0.32
GPC4-201ENST00000370828 TUBGCP5Q96RT8 1024 aa13.02□□□□□ -0.32
GPC4-201ENST00000370828 C9orf16Q9BUW7 83 aa13.02□□□□□ -0.32
GPC4-201ENST00000370828 ZNF556Q9HAH1 456 aa13.02□□□□□ -0.32
GPC4-201ENST00000370828 IMPAD1Q9NX62 359 aa13.02□□□□□ -0.32
GPC4-201ENST00000370828 NDUFB5O43674 189 aa13.02□□□□□ -0.33
GPC4-201ENST00000370828 COQ9O75208 318 aa13.02□□□□□ -0.33
GPC4-201ENST00000370828 DGAT1O75907 488 aa13.02□□□□□ -0.33
GPC4-201ENST00000370828 CALCAP01258 141 aa13.02□□□□□ -0.33
GPC4-201ENST00000370828 IST1P53990 364 aa13.02□□□□□ -0.33
GPC4-201ENST00000370828 CCDC149Q6ZUS6 474 aa13.02□□□□□ -0.33
GPC4-201ENST00000370828 SV2AQ7L0J3 742 aa13.02□□□□□ -0.33
GPC4-201ENST00000370828 RNF149Q8NC42 400 aa13.02□□□□□ -0.33
GPC4-201ENST00000370828 TARS2Q9BW92 718 aaKnown RBP13.02□□□□□ -0.33
GPC4-201ENST00000370828 PTTG2Q9NZH5 202 aa13.02□□□□□ -0.33
GPC4-201ENST00000370828 SORCS3Q9UPU3 1222 aa13.02□□□□□ -0.33
GPC4-201ENST00000370828 COL3A1P02461 1466 aaPredicted RBP13.02□□□□□ -0.33
GPC4-201ENST00000370828 TIMM44O43615 452 aa13.02□□□□□ -0.33
GPC4-201ENST00000370828 ATP5BP06576 529 aaKnown RBP13.02□□□□□ -0.33
GPC4-201ENST00000370828 CCNA2P20248 432 aa13.02□□□□□ -0.33
GPC4-201ENST00000370828 PEX2P28328 305 aa13.02□□□□□ -0.33
GPC4-201ENST00000370828 FDFT1P37268 417 aa13.02□□□□□ -0.33
GPC4-201ENST00000370828 RAB15P59190 212 aa13.02□□□□□ -0.33
GPC4-201ENST00000370828 MXD4Q14582 209 aaPredicted RBP13.02□□□□□ -0.33
GPC4-201ENST00000370828 ZIK1Q3SY52 487 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms