RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 MKRN2Q9H000 416 aaKnown RBP13.79□□□□□ -0.2
RPF1-201ENST00000370654 RALYQ9UKM9 306 aaKnown RBP13.79□□□□□ -0.2
RPF1-201ENST00000370654 SLC27A6Q9Y2P4 619 aa13.79□□□□□ -0.2
RPF1-201ENST00000370654 SPAARA0A1B0GVQ0 90 aa13.78□□□□□ -0.2
RPF1-201ENST00000370654 YJEFN3A6XGL0 299 aa13.78□□□□□ -0.2
RPF1-201ENST00000370654 KCNJ18B7U540 433 aa13.78□□□□□ -0.2
RPF1-201ENST00000370654 E7ENQ6 273 aa13.78□□□□□ -0.2
RPF1-201ENST00000370654 PIK3R2O00459 728 aa13.78□□□□□ -0.2
RPF1-201ENST00000370654 AP5Z1O43299 807 aa13.78□□□□□ -0.2
RPF1-201ENST00000370654 TSPAN3O60637 253 aa13.78□□□□□ -0.2
RPF1-201ENST00000370654 ZBED1O96006 694 aa13.78□□□□□ -0.2
RPF1-201ENST00000370654 CEACAM1P13688 526 aa13.78□□□□□ -0.2
RPF1-201ENST00000370654 TRIM21P19474 475 aaKnown RBP13.78□□□□□ -0.2
RPF1-201ENST00000370654 PRKCHP24723 683 aa13.78□□□□□ -0.2
RPF1-201ENST00000370654 SGSHP51688 502 aa13.78□□□□□ -0.2
RPF1-201ENST00000370654 COG7P83436 770 aa13.78□□□□□ -0.2
RPF1-201ENST00000370654 ENPP2Q13822 863 aa13.78□□□□□ -0.2
RPF1-201ENST00000370654 PKDCCQ504Y2 493 aa13.78□□□□□ -0.2
RPF1-201ENST00000370654 COBLL1Q53SF7 1204 aa13.78□□□□□ -0.2
RPF1-201ENST00000370654 SDE2Q6IQ49 451 aa13.78□□□□□ -0.2
RPF1-201ENST00000370654 NUDT18Q6ZVK8 323 aa13.78□□□□□ -0.2
RPF1-201ENST00000370654 PIP4P1Q86T03 277 aa13.78□□□□□ -0.2
RPF1-201ENST00000370654 FAM217AQ8IXS0 508 aa13.78□□□□□ -0.2
RPF1-201ENST00000370654 FAXDC2Q96IV6 333 aa13.78□□□□□ -0.2
RPF1-201ENST00000370654 GTPBP2Q9BX10 602 aaKnown RBP13.78□□□□□ -0.2
RPF1-201ENST00000370654 THAP10Q9P2Z0 257 aaPredicted RBP13.78□□□□□ -0.2
RPF1-201ENST00000370654 SLC6A14Q9UN76 642 aa13.78□□□□□ -0.2
RPF1-201ENST00000370654 CACNA1EQ15878 2313 aa13.78□□□□□ -0.2
RPF1-201ENST00000370654 O00370 1275 aa13.77□□□□□ -0.21
RPF1-201ENST00000370654 GFRA2O00451 464 aa13.77□□□□□ -0.21
RPF1-201ENST00000370654 XPO1O14980 1071 aaKnown RBP13.77□□□□□ -0.21
RPF1-201ENST00000370654 MSI1O43347 362 aaKnown RBP13.77□□□□□ -0.21
RPF1-201ENST00000370654 CD19P15391 556 aa13.77□□□□□ -0.21
RPF1-201ENST00000370654 FKBP3Q00688 224 aaKnown RBP13.77□□□□□ -0.21
RPF1-201ENST00000370654 ADIGQ0VDE8 80 aa13.77□□□□□ -0.21
RPF1-201ENST00000370654 LMAN2Q12907 356 aa13.77□□□□□ -0.21
RPF1-201ENST00000370654 SEMA3BQ13214 749 aa13.77□□□□□ -0.21
RPF1-201ENST00000370654 ZNF234Q14588 700 aa13.77□□□□□ -0.21
RPF1-201ENST00000370654 TRIP4Q15650 581 aaPredicted RBP13.77□□□□□ -0.21
RPF1-201ENST00000370654 DUOXA1Q1HG43 343 aa13.77□□□□□ -0.21
RPF1-201ENST00000370654 SLC36A4Q6YBV0 504 aa13.77□□□□□ -0.21
RPF1-201ENST00000370654 RSRC2Q7L4I2 434 aaKnown RBP13.77□□□□□ -0.21
RPF1-201ENST00000370654 TADA2BQ86TJ2 420 aa13.77□□□□□ -0.21
RPF1-201ENST00000370654 FMNL3Q8IVF7 1028 aa13.77□□□□□ -0.21
RPF1-201ENST00000370654 CLEC4CQ8WTT0 213 aa13.77□□□□□ -0.21
RPF1-201ENST00000370654 ZNF419Q96HQ0 510 aaPredicted RBP13.77□□□□□ -0.21
RPF1-201ENST00000370654 ATP6V1DQ9Y5K8 247 aa13.77□□□□□ -0.21
RPF1-201ENST00000370654 PCNX2A6NKB5 2137 aa13.76□□□□□ -0.21
RPF1-201ENST00000370654 SLC16A3O15427 465 aaKnown RBP13.76□□□□□ -0.21
RPF1-201ENST00000370654 STX10O60499 249 aa13.76□□□□□ -0.21
RPF1-201ENST00000370654 SERPINF2P08697 491 aa13.76□□□□□ -0.21
RPF1-201ENST00000370654 HLA-EP13747 358 aa13.76□□□□□ -0.21
RPF1-201ENST00000370654 BMP6P22004 513 aa13.76□□□□□ -0.21
RPF1-201ENST00000370654 HOXD9P28356 352 aaPredicted RBP13.76□□□□□ -0.21
RPF1-201ENST00000370654 CHKAP35790 457 aa13.76□□□□□ -0.21
RPF1-201ENST00000370654 RGS7P49802 495 aa13.76□□□□□ -0.21
RPF1-201ENST00000370654 COPAP53621 1224 aa13.76□□□□□ -0.21
RPF1-201ENST00000370654 SGO2Q562F6 1265 aa13.76□□□□□ -0.21
RPF1-201ENST00000370654 BSPRYQ5W0U4 402 aa13.76□□□□□ -0.21
RPF1-201ENST00000370654 CACUL1Q86Y37 369 aa13.76□□□□□ -0.21
RPF1-201ENST00000370654 CPXM2Q8N436 756 aa13.76□□□□□ -0.21
RPF1-201ENST00000370654 LMO3Q8TAP4 145 aa13.76□□□□□ -0.21
RPF1-201ENST00000370654 WFDC5Q8TCV5 224 aa13.76□□□□□ -0.21
RPF1-201ENST00000370654 CAMK1GQ96NX5 476 aa13.76□□□□□ -0.21
RPF1-201ENST00000370654 GSDMAQ96QA5 445 aa13.76□□□□□ -0.21
RPF1-201ENST00000370654 CDK5RAP1Q96SZ6 601 aaKnown RBP13.76□□□□□ -0.21
RPF1-201ENST00000370654 DCLK3Q9C098 648 aa13.76□□□□□ -0.21
RPF1-201ENST00000370654 ELOVL2Q9NXB9 296 aa13.76□□□□□ -0.21
RPF1-201ENST00000370654 USP36Q9P275 1121 aaKnown RBP13.76□□□□□ -0.21
RPF1-201ENST00000370654 MAN1B1Q9UKM7 699 aa13.76□□□□□ -0.21
RPF1-201ENST00000370654 ZNF510Q9Y2H8 683 aa13.76□□□□□ -0.21
RPF1-201ENST00000370654 SLCO1B1Q9Y6L6 691 aa13.76□□□□□ -0.21
RPF1-201ENST00000370654 GOLGA6L7A0A1B0GV03 622 aa13.75□□□□□ -0.21
RPF1-201ENST00000370654 ARHGAP33O14559 1287 aa13.75□□□□□ -0.21
RPF1-201ENST00000370654 ZNF217O75362 1048 aa13.75□□□□□ -0.21
RPF1-201ENST00000370654 LCP1P13796 627 aa13.75□□□□□ -0.21
RPF1-201ENST00000370654 CD59P13987 128 aa13.75□□□□□ -0.21
RPF1-201ENST00000370654 HLA-FP30511 346 aa13.75□□□□□ -0.21
RPF1-201ENST00000370654 FMO5P49326 533 aa13.75□□□□□ -0.21
RPF1-201ENST00000370654 BCAT1P54687 386 aa13.75□□□□□ -0.21
RPF1-201ENST00000370654 GFPT1Q06210 699 aaPredicted RBP13.75□□□□□ -0.21
RPF1-201ENST00000370654 BST2Q10589 180 aaKnown RBP13.75□□□□□ -0.21
RPF1-201ENST00000370654 PMF1Q6P1K2 205 aa13.75□□□□□ -0.21
RPF1-201ENST00000370654 TMPRSS6Q8IU80 811 aa13.75□□□□□ -0.21
RPF1-201ENST00000370654 ARHGEF19Q8IW93 802 aa13.75□□□□□ -0.21
RPF1-201ENST00000370654 ARHGAP18Q8N392 663 aa13.75□□□□□ -0.21
RPF1-201ENST00000370654 TTC39CQ8N584 583 aa13.75□□□□□ -0.21
RPF1-201ENST00000370654 MINDY1Q8N5J2 469 aa13.75□□□□□ -0.21
RPF1-201ENST00000370654 ZNF366Q8N895 744 aa13.75□□□□□ -0.21
RPF1-201ENST00000370654 DDI1Q8WTU0 396 aa13.75□□□□□ -0.21
RPF1-201ENST00000370654 CYB5D2Q8WUJ1 264 aa13.75□□□□□ -0.21
RPF1-201ENST00000370654 SMARCE1Q969G3 411 aa13.75□□□□□ -0.21
RPF1-201ENST00000370654 PLD4Q96BZ4 506 aa13.75□□□□□ -0.21
RPF1-201ENST00000370654 MYEOVQ96EZ4 313 aa13.75□□□□□ -0.21
RPF1-201ENST00000370654 TOE1Q96GM8 510 aaKnown RBP13.75□□□□□ -0.21
RPF1-201ENST00000370654 TSG101Q99816 390 aa13.75□□□□□ -0.21
RPF1-201ENST00000370654 SCNM1Q9BWG6 230 aa13.75□□□□□ -0.21
RPF1-201ENST00000370654 PRDM16Q9HAZ2 1276 aa13.75□□□□□ -0.21
RPF1-201ENST00000370654 LRRC4Q9HBW1 653 aa13.75□□□□□ -0.21
RPF1-201ENST00000370654 ITM2CQ9NQX7 267 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms