RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 ABCC13Q9NSE7 274 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 RCOR3Q9P2K3 495 aaPredicted RBP5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 DCDC2Q9UHG0 476 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 RAD54BQ9Y620 910 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 MYH11P35749 1972 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 TMEM88BA6NKF7 163 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 F5H5T6 163 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 ZBTB24O43167 697 aaPredicted RBP5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 SEPT4O43236 478 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 FSBPO95073 299 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 MAP3K6O95382 1288 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 HMBSP08397 361 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 AMPD1P23109 780 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 ASPAP45381 313 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 TUSC3Q13454 348 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 NAB1Q13506 487 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 CYP1B1Q16678 543 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 DEFB115Q30KQ5 88 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 TTMPQ5BVD1 217 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 OLFML2BQ68BL8 750 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 IL31Q6EBC2 164 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 DRICH1Q6PGQ1 229 aaPredicted RBP5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 DLK2Q6UY11 383 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 TRIM67Q6ZTA4 783 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 UNC45BQ8IWX7 931 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 LRRC34Q8IZ02 419 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 HASPINQ8TF76 798 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 PDCD6IPQ8WUM4 868 aaKnown RBP5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 TMEM174Q8WUU8 243 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 ATXN2LQ8WWM7 1075 aaKnown RBP5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 EMID1Q96A84 441 aaPredicted RBP5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 E2F7Q96AV8 911 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 DDX23Q9BUQ8 820 aaKnown RBP5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 TMEM106CQ9BVX2 250 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 UBXN6Q9BZV1 441 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 NRDE2Q9H7Z3 1164 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 ECT2Q9H8V3 914 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 NOD2Q9HC29 1040 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 ARHGEF38Q9NXL2 777 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 CCDC195A0A1B0GUA6 201 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 H0Y3Z8 333 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 IGF2BP3O00425 579 aaKnown RBP eCLIP5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 FANCGO15287 622 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 FGF10O15520 208 aaPredicted RBP5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 CA12O43570 354 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 HSPA8P11142 646 aaKnown RBP5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 RBL1P28749 1068 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 SCTRP47872 440 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 PEX5P50542 639 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 HDAC4P56524 1084 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 MRPS5P82675 430 aaKnown RBP5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 MGAT5Q09328 741 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 ART3Q13508 389 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 PARP6Q2NL67 630 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 FASTKD1Q53R41 847 aaKnown RBP5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 ACBD5Q5T8D3 534 aaPredicted RBP5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 MROH9Q5TGP6 573 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 ARHGAP17Q68EM7 881 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 ILDR2Q71H61 639 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 SLC26A9Q7LBE3 791 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 CCNYL1Q8N7R7 359 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 NIPA2Q8N8Q9 360 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 C12orf29Q8N999 325 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 JOSD2Q8TAC2 188 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 SKA2Q8WVK7 121 aaPredicted RBP5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 USP13Q92995 863 aaPredicted RBP5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 PCYT2Q99447 389 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 TSC22D3Q99576 134 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 EML4Q9HC35 981 aaKnown RBP5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 ERVK-5Q9HDB9 667 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 NDE1Q9NXR1 346 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 TRPM5Q9NZQ8 1165 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 TUBGCP4Q9UGJ1 667 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 PCDHB8Q9UN66 801 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 VPS9D1Q9Y2B5 631 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 FNDC3AQ9Y2H6 1198 aaKnown RBP5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 A0A0A0MRY4 1105 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 ENO4A6NNW6 628 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 RNF103O00237 685 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 LRCH4O75427 683 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 JCHAINP01591 159 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 ATP4AP20648 1035 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 BDNFP23560 247 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 YWHAQP27348 245 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 RPL22P35268 128 aaKnown RBP5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 PTPN9P43378 593 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 NPY2RP49146 381 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 IRX1P78414 480 aaPredicted RBP5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 MTM1Q13496 603 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 DBN1Q16643 649 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 SLC25A52Q3SY17 297 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 LRRC49Q8IUZ0 686 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 AGGF1Q8N302 714 aaeCLIP5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 TFAP2BQ92481 460 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 EDEM1Q92611 657 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 SPATA13Q96N96 652 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 KLF6Q99612 283 aaPredicted RBP5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 SEZ6LQ9BYH1 1024 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 UBE2OQ9C0C9 1292 aaKnown RBP5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms