RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 TSG101Q99816 390 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 TARS2Q9BW92 718 aaKnown RBP7.16□□□□□ -1.26
CSDE1-204ENST00000369530 FAM49AQ9H0Q0 323 aaPredicted RBP7.16□□□□□ -1.26
CSDE1-204ENST00000369530 ECT2Q9H8V3 914 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 PARVGQ9HBI0 331 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 APOBEC3GQ9HC16 384 aaKnown RBP7.16□□□□□ -1.26
CSDE1-204ENST00000369530 CDH22Q9UJ99 828 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 USP3Q9Y6I4 520 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 A0A088AWK7 358 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 EXTL3O43909 919 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 SNX3O60493 162 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 F11P03951 625 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 MYZAPP0CAP1 466 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 HOXB8P17481 243 aaPredicted RBP7.16□□□□□ -1.26
CSDE1-204ENST00000369530 S100A1P23297 94 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 PBX3P40426 434 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 PTDSS1P48651 473 aaKnown RBP7.16□□□□□ -1.26
CSDE1-204ENST00000369530 CACNA2D1P54289 1103 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 KRT83P78385 493 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 ENPP2Q13822 863 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 TFDP1Q14186 410 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 FKBP15Q5T1M5 1219 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 IER5LQ5T953 404 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 TCERG1LQ5VWI1 586 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 JADE1Q6IE81 842 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 FUT10Q6P4F1 479 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 AGGF1Q8N302 714 aaeCLIP7.16□□□□□ -1.26
CSDE1-204ENST00000369530 SCAIQ8N9R8 606 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 HIC2Q96JB3 615 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 GAD1Q99259 594 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 MRPL4Q9BYD3 311 aaKnown RBP7.16□□□□□ -1.26
CSDE1-204ENST00000369530 MMRN2Q9H8L6 949 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 DNM3Q9UQ16 869 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 SSX2IPQ9Y2D8 614 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 ZMYND10O75800 440 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 EIF2S1P05198 315 aaKnown RBP7.15□□□□□ -1.26
CSDE1-204ENST00000369530 EPCAMP16422 314 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 AKAP5P24588 427 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 CYP24A1Q07973 514 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 MIIPQ5JXC2 388 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 ZMIZ2Q8NF64 920 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 PRCCQ92733 491 aaPredicted RBP7.15□□□□□ -1.26
CSDE1-204ENST00000369530 EDAQ92838 391 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 SH3GL1Q99961 368 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 CBWD1Q9BRT8 395 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 HGH1Q9BTY7 390 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 TMEM109Q9BVC6 243 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 DZANK1Q9NVP4 752 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 SCHIP1Q9P0W5 487 aaPredicted RBP7.15□□□□□ -1.26
CSDE1-204ENST00000369530 PRKAG2Q9UGJ0 569 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 USP15Q9Y4E8 981 aaPredicted RBP7.15□□□□□ -1.26
CSDE1-204ENST00000369530 A0A1W2PQC6 194 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 BICDL2A1A5D9 508 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 E9PBE3 544 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 KDM1AO60341 852 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 PFDN1O60925 122 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 TBCAO75347 108 aaKnown RBP7.15□□□□□ -1.26
CSDE1-204ENST00000369530 UBOX5O94941 541 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 ASMTLO95671 621 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 CST3P01034 146 aaPredicted RBP7.15□□□□□ -1.26
CSDE1-204ENST00000369530 TGM1P22735 817 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 VHLP40337 213 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 ZXDAP98168 799 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 CREB5Q02930 508 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 PPIDQ08752 370 aaKnown RBP7.15□□□□□ -1.26
CSDE1-204ENST00000369530 MTMR3Q13615 1198 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 MAP7Q14244 749 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 KRT31Q15323 416 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 EDRF1Q3B7T1 1238 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 ZACNQ401N2 412 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 SLC44A4Q53GD3 710 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 BBS5Q8N3I7 341 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 TMC2Q8TDI7 906 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 NAT14Q8WUY8 206 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 ISCUQ9H1K1 167 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 METTL5Q9NRN9 209 aaKnown RBP7.15□□□□□ -1.26
CSDE1-204ENST00000369530 DNMT3BQ9UBC3 853 aaKnown RBP7.15□□□□□ -1.26
CSDE1-204ENST00000369530 PLAAQ9Y263 795 aa7.15□□□□□ -1.26
CSDE1-204ENST00000369530 PDXKO00764 312 aa7.15□□□□□ -1.27
CSDE1-204ENST00000369530 SLC16A4O15374 487 aa7.15□□□□□ -1.27
CSDE1-204ENST00000369530 SART1O43290 800 aaKnown RBP7.15□□□□□ -1.27
CSDE1-204ENST00000369530 FAM153BP0C7A2 387 aa7.15□□□□□ -1.27
CSDE1-204ENST00000369530 SPATA31D3P0C874 917 aa7.15□□□□□ -1.27
CSDE1-204ENST00000369530 COPB1P53618 953 aaKnown RBP7.15□□□□□ -1.27
CSDE1-204ENST00000369530 PMS2P54278 862 aa7.15□□□□□ -1.27
CSDE1-204ENST00000369530 KCNC4Q03721 635 aa7.15□□□□□ -1.27
CSDE1-204ENST00000369530 CUL1Q13616 776 aa7.15□□□□□ -1.27
CSDE1-204ENST00000369530 FAM153CQ494X1 144 aa7.15□□□□□ -1.27
CSDE1-204ENST00000369530 CFAP221Q4G0U5 840 aa7.15□□□□□ -1.27
CSDE1-204ENST00000369530 DEPDC1Q5TB30 811 aa7.15□□□□□ -1.27
CSDE1-204ENST00000369530 TDRD10Q5VZ19 366 aaKnown RBP7.15□□□□□ -1.27
CSDE1-204ENST00000369530 SLC2A7Q6PXP3 512 aa7.15□□□□□ -1.27
CSDE1-204ENST00000369530 SPATA31D4Q6ZUB0 917 aa7.15□□□□□ -1.27
CSDE1-204ENST00000369530 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.15□□□□□ -1.27
CSDE1-204ENST00000369530 OR5B17Q8NGF7 314 aa7.15□□□□□ -1.27
CSDE1-204ENST00000369530 FNDC8Q8TC99 324 aa7.15□□□□□ -1.27
CSDE1-204ENST00000369530 PGBD4Q96DM1 585 aa7.15□□□□□ -1.27
CSDE1-204ENST00000369530 PGM2Q96G03 612 aa7.15□□□□□ -1.27
CSDE1-204ENST00000369530 TMEM209Q96SK2 561 aa7.15□□□□□ -1.27
CSDE1-204ENST00000369530 PRKD2Q9BZL6 878 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms