RNA–Protein interactions for RNA: ENST00000366942.3

USH2A-202, Transcript of usherin, humanhuman

TSL 1 (best) BASIC

Gene USH2A, Length 6,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-202ENST00000366942 NEK2P51955 445 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 TAF13Q15543 124 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 WDR72Q3MJ13 1102 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 HSF5Q4G112 596 aaPredicted RBP4.22□□□□□ -1.73
USH2A-202ENST00000366942 GTF2IRD2BQ6EKJ0 949 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 LRRC8EQ6NSJ5 796 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 UBE2R2Q712K3 238 aaPredicted RBP4.22□□□□□ -1.73
USH2A-202ENST00000366942 STRADAQ7RTN6 431 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 PCGF5Q86SE9 256 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 GTF2IRD2Q86UP8 949 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 FSTL5Q8N475 847 aaPredicted RBP4.22□□□□□ -1.73
USH2A-202ENST00000366942 REPS2Q8NFH8 660 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 NETO1Q8TDF5 533 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 EXOC2Q96KP1 924 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 FAM83CQ9BQN1 747 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 ADAM7Q9H2U9 754 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 CNOT10Q9H9A5 744 aaKnown RBP4.22□□□□□ -1.73
USH2A-202ENST00000366942 B3GAT2Q9NPZ5 323 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 LIMA1Q9UHB6 759 aaKnown RBP4.22□□□□□ -1.73
USH2A-202ENST00000366942 AMFRQ9UKV5 643 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 PCDHA5Q9Y5H7 936 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 ROBO2Q9HCK4 1378 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 TNFRSF10BO14763 440 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 XPO1O14980 1071 aaKnown RBP4.22□□□□□ -1.73
USH2A-202ENST00000366942 SYN3O14994 580 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 INPPL1O15357 1258 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 OR10H2O60403 315 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 GLSO94925 669 aaPredicted RBP4.22□□□□□ -1.73
USH2A-202ENST00000366942 CRTAMO95727 393 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 CFHP08603 1231 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 OR56A5P0C7T3 313 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 MCF2P10911 925 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 EIF4BP23588 611 aaKnown RBP4.22□□□□□ -1.73
USH2A-202ENST00000366942 PSMA2P25787 234 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 CAP1Q01518 475 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 SEMG2Q02383 582 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 TUSC3Q13454 348 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 BMP2KLQ5H9B9 411 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 C6orf120Q7Z4R8 191 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 RPAINQ86UA6 219 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 CCDC25Q86WR0 208 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 P3H2Q8IVL5 708 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 MOSPD2Q8NHP6 518 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 CFAP61Q8NHU2 1237 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 CKAP2Q8WWK9 683 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 HIST1H2AAQ96QV6 131 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 OSMRQ99650 979 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 SYT15Q9BQS2 421 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 NDC1Q9BTX1 674 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 NRDE2Q9H7Z3 1164 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 PAPOLBQ9NRJ5 636 aaKnown RBP4.22□□□□□ -1.73
USH2A-202ENST00000366942 WBP1LQ9NX94 342 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 SCML1Q9UN30 329 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 SLC6A14Q9UN76 642 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 RUVBL1Q9Y265 456 aaKnown RBP4.22□□□□□ -1.73
USH2A-202ENST00000366942 FAM32AQ9Y421 112 aaKnown RBP4.22□□□□□ -1.73
USH2A-202ENST00000366942 OR10H1Q9Y4A9 318 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 THOC2Q8NI27 1593 aaKnown RBP4.22□□□□□ -1.73
USH2A-202ENST00000366942 RNF40O75150 1001 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 ANXA9O76027 345 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 C1RP00736 705 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 HIST1H2ABP04908 130 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 CCKBRP32239 447 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 OR1D2P34982 312 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 CBX3Q13185 183 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.22□□□□□ -1.73
USH2A-202ENST00000366942 PAGE2BQ5JRK9 111 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 RASIP1Q5U651 963 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 HIST3H2AQ7L7L0 130 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 ANKS1BQ7Z6G8 1248 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 PACS2Q86VP3 889 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 CCDC105Q8IYK2 499 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 ARHGEF2Q92974 986 aaKnown RBP4.22□□□□□ -1.73
USH2A-202ENST00000366942 HIST1H2ACQ93077 130 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 FER1L6-AS2Q96M78 137 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 AGPAT1Q99943 283 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 TACO1Q9BSH4 297 aaKnown RBP4.22□□□□□ -1.73
USH2A-202ENST00000366942 TRIM4Q9C037 500 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 ADAMTS10Q9H324 1103 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 GPN2Q9H9Y4 310 aaPredicted RBP4.22□□□□□ -1.73
USH2A-202ENST00000366942 PCDHB10Q9UN67 800 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 NCANO14594 1321 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 ADGRL2O95490 1459 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 NPHP3-ACAD11A0A0J9YXS1 232 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 POTEFA5A3E0 1075 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 GNGT2O14610 69 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 DUX1O43812 170 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 CYB5AP00167 134 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 TIMP1P01033 207 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 H2AFZP0C0S5 128 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 POTEIP0CG38 1075 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 INSRRP14616 1297 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 MAPK1P28482 360 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 PPP2R1BP30154 601 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 DGKGP49619 791 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 RPS6P62753 249 aaKnown RBP4.22□□□□□ -1.73
USH2A-202ENST00000366942 FUT2Q10981 343 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 HHATQ5VTY9 493 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 POTEEQ6S8J3 1075 aa4.22□□□□□ -1.73
USH2A-202ENST00000366942 H2AFVQ71UI9 128 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms