RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 R3HDM2Q9Y2K5 976 aaKnown RBP9.53□□□□□ -0.88
VPS13A-203ENST00000360280 RNASEH1O60930 286 aaKnown RBP9.53□□□□□ -0.88
VPS13A-203ENST00000360280 PNPLA4P41247 253 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 MCAMP43121 646 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 C5orf22Q49AR2 442 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 BROXQ5VW32 411 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 PYHIN1Q6K0P9 492 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 FBXO36Q8NEA4 188 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 VPS51Q9UID3 782 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 MAGEB16A2A368 324 aa9.52□□□□□ -0.88
VPS13A-203ENST00000360280 NAA30Q147X3 362 aaPredicted RBP9.52□□□□□ -0.88
VPS13A-203ENST00000360280 SLC13A5Q86YT5 568 aaPredicted RBP9.52□□□□□ -0.88
VPS13A-203ENST00000360280 NLNQ9BYT8 704 aa9.52□□□□□ -0.88
VPS13A-203ENST00000360280 TIMMDC1Q9NPL8 285 aa9.52□□□□□ -0.88
VPS13A-203ENST00000360280 COMMD3-BMI1R4GMX3 469 aa9.52□□□□□ -0.88
VPS13A-203ENST00000360280 ZW10O43264 779 aa9.52□□□□□ -0.88
VPS13A-203ENST00000360280 EFR3AQ14156 821 aa9.52□□□□□ -0.88
VPS13A-203ENST00000360280 PLCL1Q15111 1095 aa9.52□□□□□ -0.88
VPS13A-203ENST00000360280 UBP1Q9NZI7 540 aa9.52□□□□□ -0.88
VPS13A-203ENST00000360280 ANKRD12Q6UB98 2062 aa9.52□□□□□ -0.88
VPS13A-203ENST00000360280 GSTT1P30711 240 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 GLRBP48167 497 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 NR6A1Q15406 480 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 ATG14Q6ZNE5 492 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 APOBEC3FQ8IUX4 373 aaKnown RBP9.52□□□□□ -0.89
VPS13A-203ENST00000360280 DGCR6LQ9BY27 220 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 C8orf4Q9NR00 106 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 CLN6Q9NWW5 311 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 AFF2P51816 1311 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 SEC24AO95486 1093 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 C1QTNF1Q9BXJ1 281 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 METTL5Q9NRN9 209 aaKnown RBP9.52□□□□□ -0.89
VPS13A-203ENST00000360280 PRDM15P57071 1507 aaPredicted RBP9.52□□□□□ -0.89
VPS13A-203ENST00000360280 GRAP2O75791 330 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 GHRP10912 638 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 OXNAD1Q96HP4 312 aaPredicted RBP9.52□□□□□ -0.89
VPS13A-203ENST00000360280 BTBD10Q9BSF8 475 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 OXCT2Q9BYC2 517 aaPredicted RBP9.52□□□□□ -0.89
VPS13A-203ENST00000360280 GSDMCQ9BYG8 508 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 PUS3Q9BZE2 481 aaKnown RBP9.52□□□□□ -0.89
VPS13A-203ENST00000360280 BAIAP2Q9UQB8 552 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 CPSF1Q10570 1443 aaKnown RBP9.52□□□□□ -0.89
VPS13A-203ENST00000360280 LOC102724428A0A0B4J2F2 783 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 PARNO95453 639 aaKnown RBP9.52□□□□□ -0.89
VPS13A-203ENST00000360280 GARTP22102 1010 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 SKIV2L2P42285 1042 aaKnown RBP9.52□□□□□ -0.89
VPS13A-203ENST00000360280 SIK1P57059 783 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 CCZ1BP86790 482 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 CCZ1P86791 482 aaPredicted RBP9.52□□□□□ -0.89
VPS13A-203ENST00000360280 AGKQ53H12 422 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 SAR1AQ9NR31 198 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 ALG6Q9Y672 507 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 MAGEA2P43356 314 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 ABATP80404 500 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 DHRSXQ8N5I4 330 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 ATP6V0D2Q8N8Y2 350 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 RIBC2Q9H4K1 309 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 LRRC40Q9H9A6 602 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 ADCY10Q96PN6 1610 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 STK4Q13043 487 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 TEKT5Q96M29 485 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 KCNF1Q9H3M0 494 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 PRKAA1Q13131 559 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 CXXC5Q7LFL8 322 aaKnown RBP9.52□□□□□ -0.89
VPS13A-203ENST00000360280 NECAB2Q7Z6G3 386 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 ITFG1Q8TB96 612 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 BLOC1S5Q8TDH9 187 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 CHST12Q9NRB3 414 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 ARHGAP28Q9P2N2 729 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 ATP10BO94823 1461 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 SASH1O94885 1247 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 SNX4O95219 450 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 RAG1P15918 1043 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 HOXD10P28358 340 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 ETFBP38117 255 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 BIKQ13323 160 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 STK32CQ86UX6 486 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 MED8Q96G25 268 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 PAFAH2Q99487 392 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 CCDC28BQ9BUN5 200 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 USP17L10C9JJH3 530 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 SLC1A6P48664 564 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 FAM126BQ8IXS8 530 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 ZNF304Q9HCX3 659 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 TRPC4Q9UBN4 977 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 ARF4P18085 180 aaPredicted RBP9.52□□□□□ -0.89
VPS13A-203ENST00000360280 TAF13Q15543 124 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 ERFEQ4G0M1 354 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 NIF3L1Q9GZT8 377 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 REEP1Q9H902 201 aa9.52□□□□□ -0.89
VPS13A-203ENST00000360280 UBOX5O94941 541 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 PTPN1P18031 435 aaKnown RBP9.51□□□□□ -0.89
VPS13A-203ENST00000360280 RPTNQ6XPR3 784 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 STK32AQ8WU08 396 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.51□□□□□ -0.89
VPS13A-203ENST00000360280 EFCAB6Q5THR3 1501 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 MYH2Q9UKX2 1941 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 CYP2A7P20853 494 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 CLEC17AQ6ZS10 378 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 SLC38A2Q96QD8 506 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms