RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 SOX10P56693 466 aa18.85■□□□□ 0.61
SHANK1-202ENST00000359082 GIT2Q14161 759 aa18.85■□□□□ 0.61
SHANK1-202ENST00000359082 PSMD12O00232 456 aaPredicted RBP18.85■□□□□ 0.61
SHANK1-202ENST00000359082 THP07101 528 aa18.85■□□□□ 0.61
SHANK1-202ENST00000359082 CSF1RP07333 972 aa18.85■□□□□ 0.61
SHANK1-202ENST00000359082 C4BPBP20851 252 aa18.85■□□□□ 0.61
SHANK1-202ENST00000359082 NOS3P29474 1203 aa18.85■□□□□ 0.61
SHANK1-202ENST00000359082 SIKE1Q9BRV8 207 aa18.85■□□□□ 0.61
SHANK1-202ENST00000359082 IFRD1O00458 451 aaPredicted RBP18.85■□□□□ 0.61
SHANK1-202ENST00000359082 UBDO15205 165 aa18.85■□□□□ 0.61
SHANK1-202ENST00000359082 ZNF862O60290 1169 aa18.85■□□□□ 0.61
SHANK1-202ENST00000359082 MYL6P60660 151 aa18.85■□□□□ 0.61
SHANK1-202ENST00000359082 DDR2Q16832 855 aa18.85■□□□□ 0.61
SHANK1-202ENST00000359082 TCHHL1Q5QJ38 904 aaPredicted RBP18.85■□□□□ 0.61
SHANK1-202ENST00000359082 SLC22A9Q8IVM8 553 aa18.85■□□□□ 0.61
SHANK1-202ENST00000359082 APLFQ8IW19 511 aaPredicted RBP18.85■□□□□ 0.61
SHANK1-202ENST00000359082 ST13P5Q8NFI4 369 aaPredicted RBP18.85■□□□□ 0.61
SHANK1-202ENST00000359082 RXFP2Q8WXD0 754 aa18.85■□□□□ 0.61
SHANK1-202ENST00000359082 DSEQ9UL01 958 aa18.85■□□□□ 0.61
SHANK1-202ENST00000359082 CAMSAP1Q5T5Y3 1602 aa18.85■□□□□ 0.61
SHANK1-202ENST00000359082 KANSL1LA0AUZ9 987 aa18.85■□□□□ 0.61
SHANK1-202ENST00000359082 CLTBP09497 229 aa18.85■□□□□ 0.61
SHANK1-202ENST00000359082 TALDO1P37837 337 aa18.85■□□□□ 0.61
SHANK1-202ENST00000359082 MAGEA10P43363 369 aaPredicted RBP18.85■□□□□ 0.61
SHANK1-202ENST00000359082 TGM3Q08188 693 aa18.85■□□□□ 0.61
SHANK1-202ENST00000359082 MPP3Q13368 585 aa18.85■□□□□ 0.61
SHANK1-202ENST00000359082 PDIA6Q15084 440 aa18.85■□□□□ 0.61
SHANK1-202ENST00000359082 PLEKHH3Q7Z736 793 aa18.85■□□□□ 0.61
SHANK1-202ENST00000359082 MYCBPAPQ8TBZ2 947 aa18.85■□□□□ 0.61
SHANK1-202ENST00000359082 ACTR8Q9H981 624 aa18.85■□□□□ 0.61
SHANK1-202ENST00000359082 FBXO21O94952 628 aa18.84■□□□□ 0.61
SHANK1-202ENST00000359082 GRK4P32298 578 aa18.84■□□□□ 0.61
SHANK1-202ENST00000359082 CLK2P49760 499 aaKnown RBP18.84■□□□□ 0.61
SHANK1-202ENST00000359082 CYP24A1Q07973 514 aa18.84■□□□□ 0.61
SHANK1-202ENST00000359082 STYK1Q6J9G0 422 aa18.84■□□□□ 0.61
SHANK1-202ENST00000359082 ZBTB49Q6ZSB9 765 aa18.84■□□□□ 0.61
SHANK1-202ENST00000359082 NEK10Q6ZWH5 1172 aa18.84■□□□□ 0.61
SHANK1-202ENST00000359082 EDEM1Q92611 657 aa18.84■□□□□ 0.61
SHANK1-202ENST00000359082 ACOT9Q9Y305 439 aa18.84■□□□□ 0.61
SHANK1-202ENST00000359082 CAPN6Q9Y6Q1 641 aa18.84■□□□□ 0.61
SHANK1-202ENST00000359082 FAM220BPB1ANY3 271 aa18.84■□□□□ 0.61
SHANK1-202ENST00000359082 KLHL18O94889 574 aa18.84■□□□□ 0.61
SHANK1-202ENST00000359082 C1DQ13901 141 aaKnown RBP18.84■□□□□ 0.61
SHANK1-202ENST00000359082 INAQ16352 499 aa18.84■□□□□ 0.61
SHANK1-202ENST00000359082 SLC26A11Q86WA9 606 aa18.84■□□□□ 0.61
SHANK1-202ENST00000359082 MTFMTQ96DP5 389 aaKnown RBP18.84■□□□□ 0.61
SHANK1-202ENST00000359082 OSBPL6Q9BZF3 934 aa18.84■□□□□ 0.61
SHANK1-202ENST00000359082 SEMA6BQ9H3T3 888 aa18.84■□□□□ 0.61
SHANK1-202ENST00000359082 C1orf167Q5SNV9 1468 aa18.84■□□□□ 0.61
SHANK1-202ENST00000359082 CLTCQ00610 1675 aaKnown RBP18.84■□□□□ 0.61
SHANK1-202ENST00000359082 LHX1P48742 406 aa18.84■□□□□ 0.61
SHANK1-202ENST00000359082 ZCCHC8Q6NZY4 707 aaKnown RBP18.84■□□□□ 0.61
SHANK1-202ENST00000359082 C3orf67Q6ZVT6 689 aa18.84■□□□□ 0.61
SHANK1-202ENST00000359082 SH3BP5LQ7L8J4 393 aa18.84■□□□□ 0.61
SHANK1-202ENST00000359082 GATAD2AQ86YP4 633 aa18.84■□□□□ 0.61
SHANK1-202ENST00000359082 WDR49Q8IV35 697 aa18.84■□□□□ 0.61
SHANK1-202ENST00000359082 RNFT2Q96EX2 444 aa18.84■□□□□ 0.61
SHANK1-202ENST00000359082 PRRG3Q9BZD7 231 aa18.84■□□□□ 0.61
SHANK1-202ENST00000359082 TIMM13Q9Y5L4 95 aaPredicted RBP18.84■□□□□ 0.61
SHANK1-202ENST00000359082 RRM1P23921 792 aa18.84■□□□□ 0.61
SHANK1-202ENST00000359082 ERMARDQ5T6L9 678 aa18.84■□□□□ 0.61
SHANK1-202ENST00000359082 TFAP2DQ7Z6R9 452 aa18.84■□□□□ 0.61
SHANK1-202ENST00000359082 DEFB128Q7Z7B8 93 aa18.84■□□□□ 0.61
SHANK1-202ENST00000359082 CDK20Q8IZL9 346 aa18.84■□□□□ 0.61
SHANK1-202ENST00000359082 DEFB107AQ8IZN7 70 aa18.84■□□□□ 0.61
SHANK1-202ENST00000359082 DPY30Q9C005 99 aa18.84■□□□□ 0.61
SHANK1-202ENST00000359082 ATP9AO75110 1047 aa18.84■□□□□ 0.61
SHANK1-202ENST00000359082 TPBGLP0DKB5 382 aa18.84■□□□□ 0.61
SHANK1-202ENST00000359082 ADRM1Q16186 407 aa18.84■□□□□ 0.61
SHANK1-202ENST00000359082 SNTG2Q9NY99 539 aa18.84■□□□□ 0.61
SHANK1-202ENST00000359082 BST2Q10589 180 aaKnown RBP18.83■□□□□ 0.61
SHANK1-202ENST00000359082 MACC1Q6ZN28 852 aa18.83■□□□□ 0.61
SHANK1-202ENST00000359082 FAM9CQ8IZT9 166 aa18.83■□□□□ 0.61
SHANK1-202ENST00000359082 PHACTR1Q9C0D0 580 aa18.83■□□□□ 0.61
SHANK1-202ENST00000359082 CISHQ9NSE2 258 aa18.83■□□□□ 0.61
SHANK1-202ENST00000359082 KLHL3Q9UH77 587 aa18.83■□□□□ 0.61
SHANK1-202ENST00000359082 KIAA1257Q9ULG3 409 aa18.83■□□□□ 0.61
SHANK1-202ENST00000359082 CYP2A7P20853 494 aa18.83■□□□□ 0.61
SHANK1-202ENST00000359082 TAF2Q6P1X5 1199 aa18.83■□□□□ 0.61
SHANK1-202ENST00000359082 SPPL2AQ8TCT8 520 aa18.83■□□□□ 0.61
SHANK1-202ENST00000359082 TLR8Q9NR97 1041 aaKnown RBP18.83■□□□□ 0.61
SHANK1-202ENST00000359082 DDX43Q9NXZ2 648 aaKnown RBP18.83■□□□□ 0.61
SHANK1-202ENST00000359082 GPR75-ASB3A0A0A6YYF3 556 aa18.83■□□□□ 0.61
SHANK1-202ENST00000359082 PIK3CDO00329 1044 aa18.83■□□□□ 0.61
SHANK1-202ENST00000359082 ATN1P54259 1190 aaPredicted RBP18.83■□□□□ 0.61
SHANK1-202ENST00000359082 C6orf62Q9GZU0 229 aaPredicted RBP18.83■□□□□ 0.61
SHANK1-202ENST00000359082 SPATA2Q9UM82 520 aa18.83■□□□□ 0.61
SHANK1-202ENST00000359082 N6AMT1Q9Y5N5 214 aa18.83■□□□□ 0.61
SHANK1-202ENST00000359082 TM9SF1O15321 606 aa18.83■□□□□ 0.6
SHANK1-202ENST00000359082 ATG7O95352 703 aa18.83■□□□□ 0.6
SHANK1-202ENST00000359082 CBWD3Q5JTY5 395 aa18.83■□□□□ 0.6
SHANK1-202ENST00000359082 CBWD5Q5RIA9 395 aa18.83■□□□□ 0.6
SHANK1-202ENST00000359082 ACER1Q8TDN7 264 aa18.83■□□□□ 0.6
SHANK1-202ENST00000359082 MIEF2Q96C03 454 aa18.83■□□□□ 0.6
SHANK1-202ENST00000359082 NCKIPSDQ9NZQ3 722 aa18.83■□□□□ 0.6
SHANK1-202ENST00000359082 ZMYM5Q9UJ78 669 aa18.83■□□□□ 0.6
SHANK1-202ENST00000359082 CSDE1O75534 798 aaKnown RBP18.83■□□□□ 0.6
SHANK1-202ENST00000359082 N4BP2L1Q5TBK1 243 aaPredicted RBP18.83■□□□□ 0.6
SHANK1-202ENST00000359082 PXMP2Q9NR77 195 aa18.83■□□□□ 0.6
SHANK1-202ENST00000359082 SLCO1B7G3V0H7 640 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms