RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 ZDHHC17Q8IUH5 632 aa9.62□□□□□ -0.87
ATG4A-202ENST00000345734 SH2D3CQ8N5H7 860 aa9.62□□□□□ -0.87
ATG4A-202ENST00000345734 SLC43A3Q8NBI5 491 aa9.62□□□□□ -0.87
ATG4A-202ENST00000345734 ACTL9Q8TC94 416 aa9.62□□□□□ -0.87
ATG4A-202ENST00000345734 SH3TC2Q8TF17 1288 aa9.62□□□□□ -0.87
ATG4A-202ENST00000345734 LINC01599Q8WXQ3 324 aa9.62□□□□□ -0.87
ATG4A-202ENST00000345734 PGBD4Q96DM1 585 aa9.62□□□□□ -0.87
ATG4A-202ENST00000345734 HSFY1Q96LI6 401 aa9.62□□□□□ -0.87
ATG4A-202ENST00000345734 RTP3Q9BQQ7 232 aa9.62□□□□□ -0.87
ATG4A-202ENST00000345734 CALN1Q9BXU9 219 aa9.62□□□□□ -0.87
ATG4A-202ENST00000345734 DNAI2Q9GZS0 605 aa9.62□□□□□ -0.87
ATG4A-202ENST00000345734 GOLGA6AQ9NYA3 693 aa9.62□□□□□ -0.87
ATG4A-202ENST00000345734 MTRF1LQ9UGC7 380 aaKnown RBP9.62□□□□□ -0.87
ATG4A-202ENST00000345734 FIGNL2A6NMB9 653 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 B3GAT3O94766 335 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 ITGB1P05556 798 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 FAM163BP0C2L3 166 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 PECAM1P16284 738 aaPredicted RBP9.61□□□□□ -0.87
ATG4A-202ENST00000345734 ACADSBP45954 432 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 LHX1P48742 406 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 IDH3AP50213 366 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 CACNA2D1P54289 1103 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 MAP3K7CLP57077 242 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 ADCY1Q08828 1119 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 GRIK3Q13003 919 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 DPYSL3Q14195 570 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 CA9Q16790 459 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 LRRC69Q6ZNQ3 347 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 SLC26A9Q7LBE3 791 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 TMEM86AQ8N2M4 240 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 ALLCQ8N6M5 410 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 PWWP2AQ96N64 755 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 TMEM121Q9BTD3 319 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 C11orf84Q9BUA3 381 aaPredicted RBP9.61□□□□□ -0.87
ATG4A-202ENST00000345734 MAGEB5Q9BZ81 275 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 SEMA4AQ9H3S1 761 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 KRT82Q9NSB4 513 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 TMEM30AQ9NV96 361 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 DNAJC17Q9NVM6 304 aaKnown RBP9.61□□□□□ -0.87
ATG4A-202ENST00000345734 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.61□□□□□ -0.87
ATG4A-202ENST00000345734 EFR3BQ9Y2G0 817 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 ARVCFO00192 962 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 B4GALT3O60512 393 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 CAND2O75155 1236 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 ENDOD1O94919 500 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 UPP2O95045 317 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 SHBGP04278 402 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 FAM200BP0CF97 657 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 ITIH2P19823 946 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 IL4RP24394 825 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 YY1P25490 414 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 C1orf53Q5VUE5 145 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 NPNTQ6UXI9 565 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 B4GALNT4Q76KP1 1039 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 SLC35B2Q8TB61 432 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 NKD2Q969F2 451 aaPredicted RBP9.61□□□□□ -0.87
ATG4A-202ENST00000345734 ALKBH8Q96BT7 664 aaKnown RBP9.61□□□□□ -0.87
ATG4A-202ENST00000345734 PCED1BQ96HM7 432 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 KCNK16Q96T55 309 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 SMOQ99835 787 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 SNRNP25Q9BV90 132 aaKnown RBP9.61□□□□□ -0.87
ATG4A-202ENST00000345734 RHOBTB2Q9BYZ6 727 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 PABPC3Q9H361 631 aaKnown RBP9.61□□□□□ -0.87
ATG4A-202ENST00000345734 CENPHQ9H3R5 247 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 GPAMQ9HCL2 828 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 RGS18Q9NS28 235 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 FOXD3Q9UJU5 478 aaPredicted RBP9.61□□□□□ -0.87
ATG4A-202ENST00000345734 ANAPC5Q9UJX4 755 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 DRG1Q9Y295 367 aaKnown RBP9.61□□□□□ -0.87
ATG4A-202ENST00000345734 SQORQ9Y6N5 450 aa9.61□□□□□ -0.87
ATG4A-202ENST00000345734 PTPRDP23468 1912 aa9.6□□□□□ -0.87
ATG4A-202ENST00000345734 C9IYK1 514 aa9.6□□□□□ -0.87
ATG4A-202ENST00000345734 TGFBR3LH3BV60 316 aa9.6□□□□□ -0.87
ATG4A-202ENST00000345734 ITGAVP06756 1048 aa9.6□□□□□ -0.87
ATG4A-202ENST00000345734 ODC1P11926 461 aa9.6□□□□□ -0.87
ATG4A-202ENST00000345734 PTPN9P43378 593 aa9.6□□□□□ -0.87
ATG4A-202ENST00000345734 SLC8A3P57103 927 aa9.6□□□□□ -0.87
ATG4A-202ENST00000345734 TUSC3Q13454 348 aa9.6□□□□□ -0.87
ATG4A-202ENST00000345734 KRT81Q14533 505 aa9.6□□□□□ -0.87
ATG4A-202ENST00000345734 P3H1Q32P28 736 aa9.6□□□□□ -0.87
ATG4A-202ENST00000345734 DNAJC21Q5F1R6 531 aaKnown RBP9.6□□□□□ -0.87
ATG4A-202ENST00000345734 CLLU1OSQ5K130 101 aa9.6□□□□□ -0.87
ATG4A-202ENST00000345734 IZUMO3Q5VZ72 239 aa9.6□□□□□ -0.87
ATG4A-202ENST00000345734 GPRIN1Q7Z2K8 1008 aa9.6□□□□□ -0.87
ATG4A-202ENST00000345734 CTU1Q7Z7A3 348 aaKnown RBP9.6□□□□□ -0.87
ATG4A-202ENST00000345734 FAM35AQ86V20 835 aa9.6□□□□□ -0.87
ATG4A-202ENST00000345734 DEFB106AQ8N104 65 aa9.6□□□□□ -0.87
ATG4A-202ENST00000345734 CCDC89Q8N998 374 aa9.6□□□□□ -0.87
ATG4A-202ENST00000345734 TTC16Q8NEE8 873 aa9.6□□□□□ -0.87
ATG4A-202ENST00000345734 ZMIZ2Q8NF64 920 aa9.6□□□□□ -0.87
ATG4A-202ENST00000345734 UHMK1Q8TAS1 419 aaKnown RBP9.6□□□□□ -0.87
ATG4A-202ENST00000345734 FAM76AQ8TAV0 307 aa9.6□□□□□ -0.87
ATG4A-202ENST00000345734 CENPIQ92674 756 aaPredicted RBP9.6□□□□□ -0.87
ATG4A-202ENST00000345734 EXOC4Q96A65 974 aa9.6□□□□□ -0.87
ATG4A-202ENST00000345734 TBCBQ99426 244 aa9.6□□□□□ -0.87
ATG4A-202ENST00000345734 DDX23Q9BUQ8 820 aaKnown RBP9.6□□□□□ -0.87
ATG4A-202ENST00000345734 ADAM7Q9H2U9 754 aa9.6□□□□□ -0.87
ATG4A-202ENST00000345734 TMBIM4Q9HC24 238 aa9.6□□□□□ -0.87
ATG4A-202ENST00000345734 UBN1Q9NPG3 1134 aa9.6□□□□□ -0.87
ATG4A-202ENST00000345734 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms