RNA–Protein interactions for RNA: ENST00000344129.2

CT55-202, Transcript of cancer/testis antigen 55, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CT55, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-202ENST00000344129 HMBSP08397 361 aa13.17□□□□□ -0.3
CT55-202ENST00000344129 GOT1P17174 413 aa13.17□□□□□ -0.3
CT55-202ENST00000344129 PSEN1P49768 467 aa13.17□□□□□ -0.3
CT55-202ENST00000344129 FAM72AQ5TYM5 149 aa13.17□□□□□ -0.3
CT55-202ENST00000344129 FAM72DQ6L9T8 149 aa13.17□□□□□ -0.3
CT55-202ENST00000344129 MSANTD2Q6P1R3 559 aa13.17□□□□□ -0.3
CT55-202ENST00000344129 NPNTQ6UXI9 565 aa13.17□□□□□ -0.3
CT55-202ENST00000344129 FAM72BQ86X60 149 aa13.17□□□□□ -0.3
CT55-202ENST00000344129 GPR161Q8N6U8 529 aaKnown RBP13.17□□□□□ -0.3
CT55-202ENST00000344129 PCDH19Q8TAB3 1148 aa13.17□□□□□ -0.3
CT55-202ENST00000344129 FAM71BQ8TC56 605 aa13.17□□□□□ -0.3
CT55-202ENST00000344129 ARNTL2Q8WYA1 636 aa13.17□□□□□ -0.3
CT55-202ENST00000344129 RNF157Q96PX1 679 aa13.17□□□□□ -0.3
CT55-202ENST00000344129 ZNF334Q9HCZ1 680 aaPredicted RBP13.17□□□□□ -0.3
CT55-202ENST00000344129 CWC15Q9P013 229 aaKnown RBP13.17□□□□□ -0.3
CT55-202ENST00000344129 DMGDHQ9UI17 866 aaKnown RBP13.17□□□□□ -0.3
CT55-202ENST00000344129 MAFFQ9ULX9 164 aa13.17□□□□□ -0.3
CT55-202ENST00000344129 RANBP2P49792 3224 aaKnown RBP13.17□□□□□ -0.3
CT55-202ENST00000344129 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.16□□□□□ -0.3
CT55-202ENST00000344129 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.16□□□□□ -0.3
CT55-202ENST00000344129 ZNF840PA6NDX5 716 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 H3BNC9 293 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 PER2O15055 1255 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 TTI1O43156 1089 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 CREB3O43889 395 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 TLR5O60602 858 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 MOCS2O96007 188 aaPredicted RBP13.16□□□□□ -0.3
CT55-202ENST00000344129 LRG1P02750 347 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 CHRNA3P32297 505 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 COILP38432 576 aaPredicted RBP13.16□□□□□ -0.3
CT55-202ENST00000344129 CLCN4P51793 760 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 TUBB4BP68371 445 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 EIF4EBP2Q13542 120 aaPredicted RBP13.16□□□□□ -0.3
CT55-202ENST00000344129 CYP1B1Q16678 543 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 ARL13BQ3SXY8 428 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 PPP2R2DQ66LE6 453 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 CCDC70Q6NSX1 233 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 C1orf228Q6PIY5 440 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 CCDC137Q6PK04 289 aaKnown RBP13.16□□□□□ -0.3
CT55-202ENST00000344129 BBS12Q6ZW61 710 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 HS6ST3Q8IZP7 471 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 PQLC3Q8N755 202 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 C12orf50Q8NA57 414 aaPredicted RBP13.16□□□□□ -0.3
CT55-202ENST00000344129 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.16□□□□□ -0.3
CT55-202ENST00000344129 SLC22A17Q8WUG5 538 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 PSMG2Q969U7 264 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 NTAN1Q96AB6 310 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 SAMD11Q96NU1 681 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 SERPINB11Q96P15 392 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 PARD6BQ9BYG5 372 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 SLITRK6Q9H5Y7 841 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 TRPM5Q9NZQ8 1165 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 MARCH2Q9P0N8 246 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 MSRAQ9UJ68 235 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 SLC12A8A0AV02 714 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 ZSCAN5CA6NGD5 496 aaPredicted RBP13.16□□□□□ -0.3
CT55-202ENST00000344129 CCL16O15467 120 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 CLASP2O75122 1294 aaKnown RBP13.16□□□□□ -0.3
CT55-202ENST00000344129 HEXIM1O94992 359 aaKnown RBP13.16□□□□□ -0.3
CT55-202ENST00000344129 PECAM1P16284 738 aaPredicted RBP13.16□□□□□ -0.3
CT55-202ENST00000344129 EPCAMP16422 314 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 AMPD1P23109 780 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 TBX4P57082 545 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 DR1Q01658 176 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 OTUD4Q01804 1114 aaKnown RBP13.16□□□□□ -0.3
CT55-202ENST00000344129 SCAPQ12770 1279 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 CCDC149Q6ZUS6 474 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 RBM23Q86U06 439 aaKnown RBP13.16□□□□□ -0.3
CT55-202ENST00000344129 PSTKQ8IV42 348 aaKnown RBP13.16□□□□□ -0.3
CT55-202ENST00000344129 CCDC105Q8IYK2 499 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 PDZD8Q8NEN9 1154 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 GDPD5Q8WTR4 605 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 OVCA2Q8WZ82 227 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 TRMT2BQ96GJ1 504 aaKnown RBP13.16□□□□□ -0.3
CT55-202ENST00000344129 FCRL2Q96LA5 508 aaPredicted RBP13.16□□□□□ -0.3
CT55-202ENST00000344129 MYRFLQ96LU7 910 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 CSPG4P5Q96PW8 444 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 ZNF670Q9BS34 389 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 TRIM51Q9BSJ1 452 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 SIK2Q9H0K1 926 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 LRRC19Q9H756 370 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 OLA1Q9NTK5 396 aaKnown RBP13.16□□□□□ -0.3
CT55-202ENST00000344129 ETNK2Q9NVF9 386 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 ARHGEF38Q9NXL2 777 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 XPO7Q9UIA9 1087 aaKnown RBP13.16□□□□□ -0.3
CT55-202ENST00000344129 EFR3BQ9Y2G0 817 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 MFHAS1Q9Y4C4 1052 aa13.16□□□□□ -0.3
CT55-202ENST00000344129 ESYT3A0FGR9 886 aa13.15□□□□□ -0.3
CT55-202ENST00000344129 EPOPA6NHQ4 379 aa13.15□□□□□ -0.3
CT55-202ENST00000344129 EEF2KO00418 725 aaKnown RBP13.15□□□□□ -0.3
CT55-202ENST00000344129 APOL1O14791 398 aa13.15□□□□□ -0.3
CT55-202ENST00000344129 CCR1P32246 355 aa13.15□□□□□ -0.3
CT55-202ENST00000344129 ARL4AP40617 200 aa13.15□□□□□ -0.3
CT55-202ENST00000344129 PTGIRP43119 386 aa13.15□□□□□ -0.3
CT55-202ENST00000344129 AIF1P55008 147 aa13.15□□□□□ -0.3
CT55-202ENST00000344129 GUCY2DQ02846 1103 aa13.15□□□□□ -0.3
CT55-202ENST00000344129 CCNG2Q16589 344 aa13.15□□□□□ -0.3
CT55-202ENST00000344129 GLE1Q53GS7 698 aaKnown RBP13.15□□□□□ -0.3
CT55-202ENST00000344129 HECTD3Q5T447 861 aa13.15□□□□□ -0.3
CT55-202ENST00000344129 B4GALNT4Q76KP1 1039 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms