RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 TNRC6CQ9HCJ0 1690 aaKnown RBP15.34■□□□□ 0.05
CLCN1-201ENST00000343257 DENRO43583 198 aaKnown RBP15.34■□□□□ 0.05
CLCN1-201ENST00000343257 GRAP2O75791 330 aa15.34■□□□□ 0.05
CLCN1-201ENST00000343257 PIM1P11309 404 aaPredicted RBP15.34■□□□□ 0.05
CLCN1-201ENST00000343257 EIF4BP23588 611 aaKnown RBP15.34■□□□□ 0.05
CLCN1-201ENST00000343257 RBL1P28749 1068 aa15.34■□□□□ 0.05
CLCN1-201ENST00000343257 PSMC1P62191 440 aaKnown RBP15.34■□□□□ 0.05
CLCN1-201ENST00000343257 SLC25A11Q02978 314 aaKnown RBP15.34■□□□□ 0.05
CLCN1-201ENST00000343257 HADHQ16836 314 aaKnown RBP15.34■□□□□ 0.05
CLCN1-201ENST00000343257 SLC9B1Q4ZJI4 515 aa15.34■□□□□ 0.05
CLCN1-201ENST00000343257 TRAPPC3LQ5T215 181 aa15.34■□□□□ 0.05
CLCN1-201ENST00000343257 DENND1BQ6P3S1 775 aa15.34■□□□□ 0.05
CLCN1-201ENST00000343257 NETO2Q8NC67 525 aa15.34■□□□□ 0.05
CLCN1-201ENST00000343257 TMEM35BQ8NCS4 154 aa15.34■□□□□ 0.05
CLCN1-201ENST00000343257 ARMC7Q9H6L4 198 aa15.34■□□□□ 0.05
CLCN1-201ENST00000343257 WDR55Q9H6Y2 383 aaPredicted RBP15.34■□□□□ 0.05
CLCN1-201ENST00000343257 TIMMDC1Q9NPL8 285 aa15.34■□□□□ 0.05
CLCN1-201ENST00000343257 AGO2Q9UKV8 859 aaKnown RBP15.34■□□□□ 0.05
CLCN1-201ENST00000343257 FBXO21O94952 628 aa15.33■□□□□ 0.04
CLCN1-201ENST00000343257 ABCG1P45844 678 aa15.33■□□□□ 0.04
CLCN1-201ENST00000343257 KCNJ11Q14654 390 aa15.33■□□□□ 0.04
CLCN1-201ENST00000343257 LRRC38Q5VT99 294 aa15.33■□□□□ 0.04
CLCN1-201ENST00000343257 MBLAC2Q68D91 279 aa15.33■□□□□ 0.04
CLCN1-201ENST00000343257 SNX32Q86XE0 403 aa15.33■□□□□ 0.04
CLCN1-201ENST00000343257 FNDC8Q8TC99 324 aa15.33■□□□□ 0.04
CLCN1-201ENST00000343257 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.33■□□□□ 0.04
CLCN1-201ENST00000343257 DIS3LQ8TF46 1054 aaKnown RBP15.33■□□□□ 0.04
CLCN1-201ENST00000343257 FBXL18Q96ME1 805 aa15.33■□□□□ 0.04
CLCN1-201ENST00000343257 NRDE2Q9H7Z3 1164 aa15.33■□□□□ 0.04
CLCN1-201ENST00000343257 AGO4Q9HCK5 861 aaKnown RBP15.33■□□□□ 0.04
CLCN1-201ENST00000343257 RRN3Q9NYV6 651 aa15.33■□□□□ 0.04
CLCN1-201ENST00000343257 RSL24D1Q9UHA3 163 aaKnown RBP15.33■□□□□ 0.04
CLCN1-201ENST00000343257 CCNE2O96020 404 aa15.33■□□□□ 0.04
CLCN1-201ENST00000343257 APOEP02649 317 aa15.33■□□□□ 0.04
CLCN1-201ENST00000343257 C1QAP02745 245 aa15.33■□□□□ 0.04
CLCN1-201ENST00000343257 THRAP10827 490 aa15.33■□□□□ 0.04
CLCN1-201ENST00000343257 PTPN1P18031 435 aaKnown RBP15.33■□□□□ 0.04
CLCN1-201ENST00000343257 MTTPP55157 894 aa15.33■□□□□ 0.04
CLCN1-201ENST00000343257 MS4A2Q01362 244 aa15.33■□□□□ 0.04
CLCN1-201ENST00000343257 PSMD6Q15008 389 aa15.33■□□□□ 0.04
CLCN1-201ENST00000343257 SCYL2Q6P3W7 929 aa15.33■□□□□ 0.04
CLCN1-201ENST00000343257 TAS1R3Q7RTX0 852 aa15.33■□□□□ 0.04
CLCN1-201ENST00000343257 CAND1Q86VP6 1230 aaKnown RBP15.33■□□□□ 0.04
CLCN1-201ENST00000343257 TSPAN14Q8NG11 270 aa15.33■□□□□ 0.04
CLCN1-201ENST00000343257 LZICQ8WZA0 190 aa15.33■□□□□ 0.04
CLCN1-201ENST00000343257 KCNK16Q96T55 309 aa15.33■□□□□ 0.04
CLCN1-201ENST00000343257 FZD1Q9UP38 647 aa15.33■□□□□ 0.04
CLCN1-201ENST00000343257 TPP1O14773 563 aa15.32■□□□□ 0.04
CLCN1-201ENST00000343257 CASQ2O14958 399 aaPredicted RBP15.32■□□□□ 0.04
CLCN1-201ENST00000343257 P4HA1P13674 534 aa15.32■□□□□ 0.04
CLCN1-201ENST00000343257 MIPP30301 263 aa15.32■□□□□ 0.04
CLCN1-201ENST00000343257 PRAMEP78395 509 aa15.32■□□□□ 0.04
CLCN1-201ENST00000343257 SULT2A1Q06520 285 aa15.32■□□□□ 0.04
CLCN1-201ENST00000343257 C15orf39Q6ZRI6 1047 aa15.32■□□□□ 0.04
CLCN1-201ENST00000343257 WRNIP1Q96S55 665 aa15.32■□□□□ 0.04
CLCN1-201ENST00000343257 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.32■□□□□ 0.04
CLCN1-201ENST00000343257 GABBR1Q9UBS5 961 aa15.32■□□□□ 0.04
CLCN1-201ENST00000343257 CCPG1Q9ULG6 757 aa15.32■□□□□ 0.04
CLCN1-201ENST00000343257 MAGED2Q9UNF1 606 aaPredicted RBP15.32■□□□□ 0.04
CLCN1-201ENST00000343257 TRIM43BA6NCK2 446 aa15.32■□□□□ 0.04
CLCN1-201ENST00000343257 AP1G1O43747 822 aa15.32■□□□□ 0.04
CLCN1-201ENST00000343257 ZC3H11AO75152 810 aaKnown RBP eCLIP15.32■□□□□ 0.04
CLCN1-201ENST00000343257 RAD17O75943 681 aa15.32■□□□□ 0.04
CLCN1-201ENST00000343257 EPHA3P29320 983 aa15.32■□□□□ 0.04
CLCN1-201ENST00000343257 NR1H2P55055 460 aa15.32■□□□□ 0.04
CLCN1-201ENST00000343257 MRPS9P82933 396 aaKnown RBP15.32■□□□□ 0.04
CLCN1-201ENST00000343257 KLF10Q13118 480 aa15.32■□□□□ 0.04
CLCN1-201ENST00000343257 PTPN20Q4JDL3 420 aa15.32■□□□□ 0.04
CLCN1-201ENST00000343257 CES3Q6UWW8 571 aa15.32■□□□□ 0.04
CLCN1-201ENST00000343257 FAM196AQ6ZSG2 479 aa15.32■□□□□ 0.04
CLCN1-201ENST00000343257 PATL1Q86TB9 770 aaKnown RBP15.32■□□□□ 0.04
CLCN1-201ENST00000343257 NUP93Q8N1F7 819 aa15.32■□□□□ 0.04
CLCN1-201ENST00000343257 TMEM143Q96AN5 459 aa15.32■□□□□ 0.04
CLCN1-201ENST00000343257 OR52B2Q96RD2 323 aa15.32■□□□□ 0.04
CLCN1-201ENST00000343257 HAPLN2Q9GZV7 340 aa15.32■□□□□ 0.04
CLCN1-201ENST00000343257 EMCNQ9ULC0 261 aa15.32■□□□□ 0.04
CLCN1-201ENST00000343257 SSX2IPQ9Y2D8 614 aa15.32■□□□□ 0.04
CLCN1-201ENST00000343257 CNTNAP4Q9C0A0 1308 aa15.32■□□□□ 0.04
CLCN1-201ENST00000343257 CRHR1P34998 444 aa15.32■□□□□ 0.04
CLCN1-201ENST00000343257 MAPK10P53779 464 aa15.32■□□□□ 0.04
CLCN1-201ENST00000343257 ADGRE1Q14246 886 aa15.32■□□□□ 0.04
CLCN1-201ENST00000343257 PPP2R5DQ14738 602 aa15.32■□□□□ 0.04
CLCN1-201ENST00000343257 ZBTB33Q86T24 672 aa15.32■□□□□ 0.04
CLCN1-201ENST00000343257 MYO1HQ8N1T3 1032 aa15.32■□□□□ 0.04
CLCN1-201ENST00000343257 MAPK15Q8TD08 544 aa15.32■□□□□ 0.04
CLCN1-201ENST00000343257 TMA16Q96EY4 203 aaKnown RBP15.32■□□□□ 0.04
CLCN1-201ENST00000343257 TARS2Q9BW92 718 aaKnown RBP15.32■□□□□ 0.04
CLCN1-201ENST00000343257 GLIS2Q9BZE0 524 aaPredicted RBP15.32■□□□□ 0.04
CLCN1-201ENST00000343257 COG4Q9H9E3 785 aa15.32■□□□□ 0.04
CLCN1-201ENST00000343257 NXF1Q9UBU9 619 aaKnown RBP15.32■□□□□ 0.04
CLCN1-201ENST00000343257 APOC4-APOC2K7ER74 178 aa15.31■□□□□ 0.04
CLCN1-201ENST00000343257 GSRP00390 522 aa15.31■□□□□ 0.04
CLCN1-201ENST00000343257 APOC2P02655 101 aa15.31■□□□□ 0.04
CLCN1-201ENST00000343257 KRT7P08729 469 aa15.31■□□□□ 0.04
CLCN1-201ENST00000343257 COL6A2P12110 1019 aa15.31■□□□□ 0.04
CLCN1-201ENST00000343257 MLH1P40692 756 aa15.31■□□□□ 0.04
CLCN1-201ENST00000343257 CCR10P46092 362 aa15.31■□□□□ 0.04
CLCN1-201ENST00000343257 RAP1GAPP47736 663 aa15.31■□□□□ 0.04
CLCN1-201ENST00000343257 MYL6P60660 151 aa15.31■□□□□ 0.04
CLCN1-201ENST00000343257 POTEHQ6S545 545 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms