RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 NDE1Q9NXR1 346 aa19.44■□□□□ 0.7
PSPC1-201ENST00000338910 IL1RAPL1Q9NZN1 696 aa19.44■□□□□ 0.7
PSPC1-201ENST00000338910 ITGA11Q9UKX5 1188 aa19.44■□□□□ 0.7
PSPC1-201ENST00000338910 LPXNO60711 386 aa19.44■□□□□ 0.7
PSPC1-201ENST00000338910 GPR32O75388 356 aa19.44■□□□□ 0.7
PSPC1-201ENST00000338910 TM7SF2O76062 418 aa19.44■□□□□ 0.7
PSPC1-201ENST00000338910 MICAL2O94851 1124 aa19.44■□□□□ 0.7
PSPC1-201ENST00000338910 ITGAVP06756 1048 aa19.44■□□□□ 0.7
PSPC1-201ENST00000338910 BGNP21810 368 aa19.44■□□□□ 0.7
PSPC1-201ENST00000338910 PSMA2P25787 234 aa19.44■□□□□ 0.7
PSPC1-201ENST00000338910 GRM5P41594 1212 aa19.44■□□□□ 0.7
PSPC1-201ENST00000338910 NDST1P52848 882 aa19.44■□□□□ 0.7
PSPC1-201ENST00000338910 TAP1Q03518 808 aa19.44■□□□□ 0.7
PSPC1-201ENST00000338910 LSAMPQ13449 338 aa19.44■□□□□ 0.7
PSPC1-201ENST00000338910 IRF5Q13568 498 aa19.44■□□□□ 0.7
PSPC1-201ENST00000338910 TREML1Q86YW5 311 aa19.44■□□□□ 0.7
PSPC1-201ENST00000338910 EMC1Q8N766 993 aa19.44■□□□□ 0.7
PSPC1-201ENST00000338910 PPP2R3CQ969Q6 453 aa19.44■□□□□ 0.7
PSPC1-201ENST00000338910 APBA2Q99767 749 aa19.44■□□□□ 0.7
PSPC1-201ENST00000338910 CNTN3Q9P232 1028 aa19.44■□□□□ 0.7
PSPC1-201ENST00000338910 ABT1Q9ULW3 272 aaKnown RBP19.44■□□□□ 0.7
PSPC1-201ENST00000338910 COMMD3-BMI1R4GMX3 469 aa19.44■□□□□ 0.7
PSPC1-201ENST00000338910 FAM237BA0A1B0GVD1 139 aa19.43■□□□□ 0.7
PSPC1-201ENST00000338910 M0QYV0 167 aa19.43■□□□□ 0.7
PSPC1-201ENST00000338910 RNASEH1O60930 286 aaKnown RBP19.43■□□□□ 0.7
PSPC1-201ENST00000338910 ERBB2P04626 1255 aa19.43■□□□□ 0.7
PSPC1-201ENST00000338910 MYL3P08590 195 aa19.43■□□□□ 0.7
PSPC1-201ENST00000338910 CYP2C9P11712 490 aa19.43■□□□□ 0.7
PSPC1-201ENST00000338910 AP2B1P63010 937 aa19.43■□□□□ 0.7
PSPC1-201ENST00000338910 FNBP1LQ5T0N5 605 aa19.43■□□□□ 0.7
PSPC1-201ENST00000338910 MARK2Q7KZI7 788 aaKnown RBP19.43■□□□□ 0.7
PSPC1-201ENST00000338910 ZMAT2Q96NC0 199 aaKnown RBP19.43■□□□□ 0.7
PSPC1-201ENST00000338910 TMEM121Q9BTD3 319 aa19.43■□□□□ 0.7
PSPC1-201ENST00000338910 E5RJQ4 531 aa19.43■□□□□ 0.7
PSPC1-201ENST00000338910 PIK3R2O00459 728 aa19.43■□□□□ 0.7
PSPC1-201ENST00000338910 CREB3O43889 395 aa19.43■□□□□ 0.7
PSPC1-201ENST00000338910 CPT1AP50416 773 aa19.43■□□□□ 0.7
PSPC1-201ENST00000338910 ZNF200P98182 395 aaPredicted RBP19.43■□□□□ 0.7
PSPC1-201ENST00000338910 ULK2Q8IYT8 1036 aa19.43■□□□□ 0.7
PSPC1-201ENST00000338910 SOCS4Q8WXH5 440 aa19.43■□□□□ 0.7
PSPC1-201ENST00000338910 FAM111AQ96PZ2 611 aa19.43■□□□□ 0.7
PSPC1-201ENST00000338910 AP5M1Q9H0R1 490 aa19.43■□□□□ 0.7
PSPC1-201ENST00000338910 LMCD1Q9NZU5 365 aa19.43■□□□□ 0.7
PSPC1-201ENST00000338910 PHF24Q9UPV7 400 aa19.43■□□□□ 0.7
PSPC1-201ENST00000338910 TLL2Q9Y6L7 1015 aa19.43■□□□□ 0.7
PSPC1-201ENST00000338910 IFNB1P01574 187 aa19.42■□□□□ 0.7
PSPC1-201ENST00000338910 HNRNPDQ14103 355 aaKnown RBP19.42■□□□□ 0.7
PSPC1-201ENST00000338910 GLRA4Q5JXX5 417 aa19.42■□□□□ 0.7
PSPC1-201ENST00000338910 ANKRD22Q5VYY1 191 aa19.42■□□□□ 0.7
PSPC1-201ENST00000338910 XYLT1Q86Y38 959 aa19.42■□□□□ 0.7
PSPC1-201ENST00000338910 DNAJB3Q8WWF6 145 aa19.42■□□□□ 0.7
PSPC1-201ENST00000338910 APOPT1Q96IL0 206 aa19.42■□□□□ 0.7
PSPC1-201ENST00000338910 OLFM3Q96PB7 478 aa19.42■□□□□ 0.7
PSPC1-201ENST00000338910 ATXN10Q9UBB4 475 aa19.42■□□□□ 0.7
PSPC1-201ENST00000338910 SLC7A8Q9UHI5 535 aa19.42■□□□□ 0.7
PSPC1-201ENST00000338910 PPM1HQ9ULR3 514 aa19.42■□□□□ 0.7
PSPC1-201ENST00000338910 BARX2Q9UMQ3 279 aaPredicted RBP19.42■□□□□ 0.7
PSPC1-201ENST00000338910 TRIP12Q14669 1992 aaPredicted RBP19.42■□□□□ 0.7
PSPC1-201ENST00000338910 MBLAC1A4D2B0 266 aaPredicted RBP19.42■□□□□ 0.7
PSPC1-201ENST00000338910 PPEF2O14830 753 aa19.42■□□□□ 0.7
PSPC1-201ENST00000338910 TREHO43280 583 aa19.42■□□□□ 0.7
PSPC1-201ENST00000338910 BUD23O43709 281 aaKnown RBP19.42■□□□□ 0.7
PSPC1-201ENST00000338910 CIB2O75838 187 aa19.42■□□□□ 0.7
PSPC1-201ENST00000338910 MT-ND3P03897 115 aa19.42■□□□□ 0.7
PSPC1-201ENST00000338910 ENO1P06733 434 aaKnown RBP19.42■□□□□ 0.7
PSPC1-201ENST00000338910 PSEN2P49810 448 aa19.42■□□□□ 0.7
PSPC1-201ENST00000338910 SMTNL2Q2TAL5 461 aa19.42■□□□□ 0.7
PSPC1-201ENST00000338910 HSF5Q4G112 596 aaPredicted RBP19.42■□□□□ 0.7
PSPC1-201ENST00000338910 KCNT1Q5JUK3 1230 aa19.42■□□□□ 0.7
PSPC1-201ENST00000338910 LRRC38Q5VT99 294 aa19.42■□□□□ 0.7
PSPC1-201ENST00000338910 SLC27A1Q6PCB7 646 aa19.42■□□□□ 0.7
PSPC1-201ENST00000338910 SPOCD1Q6ZMY3 1216 aa19.42■□□□□ 0.7
PSPC1-201ENST00000338910 SH2D5Q6ZV89 423 aa19.42■□□□□ 0.7
PSPC1-201ENST00000338910 ACAD11Q709F0 780 aa19.42■□□□□ 0.7
PSPC1-201ENST00000338910 ARFGAP1Q8N6T3 406 aa19.42■□□□□ 0.7
PSPC1-201ENST00000338910 C12orf29Q8N999 325 aa19.42■□□□□ 0.7
PSPC1-201ENST00000338910 TTC17Q96AE7 1141 aa19.42■□□□□ 0.7
PSPC1-201ENST00000338910 HAUS1Q96CS2 278 aa19.42■□□□□ 0.7
PSPC1-201ENST00000338910 CLPTM1LQ96KA5 538 aa19.42■□□□□ 0.7
PSPC1-201ENST00000338910 TTC1Q99614 292 aa19.42■□□□□ 0.7
PSPC1-201ENST00000338910 APOL6Q9BWW8 343 aa19.42■□□□□ 0.7
PSPC1-201ENST00000338910 GPAMQ9HCL2 828 aa19.42■□□□□ 0.7
PSPC1-201ENST00000338910 SMIM35A0A1B0GVV1 85 aa19.41■□□□□ 0.7
PSPC1-201ENST00000338910 E7ESA3 106 aa19.41■□□□□ 0.7
PSPC1-201ENST00000338910 SGK1O00141 431 aa19.41■□□□□ 0.7
PSPC1-201ENST00000338910 KLF11O14901 512 aa19.41■□□□□ 0.7
PSPC1-201ENST00000338910 VDRP11473 427 aa19.41■□□□□ 0.7
PSPC1-201ENST00000338910 GPD2P43304 727 aa19.41■□□□□ 0.7
PSPC1-201ENST00000338910 ERFP50548 548 aa19.41■□□□□ 0.7
PSPC1-201ENST00000338910 SLC18A2Q05940 514 aa19.41■□□□□ 0.7
PSPC1-201ENST00000338910 SREBF2Q12772 1141 aa19.41■□□□□ 0.7
PSPC1-201ENST00000338910 DCAF4L1Q3SXM0 396 aa19.41■□□□□ 0.7
PSPC1-201ENST00000338910 C6orf163Q5TEZ5 329 aa19.41■□□□□ 0.7
PSPC1-201ENST00000338910 TMCO4Q5TGY1 634 aa19.41■□□□□ 0.7
PSPC1-201ENST00000338910 PCGF5Q86SE9 256 aa19.41■□□□□ 0.7
PSPC1-201ENST00000338910 STKLD1Q8NE28 680 aa19.41■□□□□ 0.7
PSPC1-201ENST00000338910 FBXO36Q8NEA4 188 aa19.41■□□□□ 0.7
PSPC1-201ENST00000338910 CPT1BQ92523 772 aa19.41■□□□□ 0.7
PSPC1-201ENST00000338910 SERAC1Q96JX3 654 aa19.41■□□□□ 0.7
PSPC1-201ENST00000338910 ARHGAP39Q9C0H5 1083 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms