RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 FDFT1P37268 417 aa5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 NOP2P46087 812 aaKnown RBP5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 YWHAZP63104 245 aaKnown RBP5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 AUHQ13825 339 aaKnown RBP5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 BZW1Q7L1Q6 419 aaKnown RBP5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 CAND1Q86VP6 1230 aaKnown RBP5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 LZTR1Q8N653 840 aa5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 C12orf29Q8N999 325 aa5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 ZNF599Q96NL3 588 aa5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 FAM83CQ9BQN1 747 aa5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 ACSS3Q9H6R3 686 aa5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 CASS4Q9NQ75 786 aa5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 ARHGEF4Q9NR80 690 aa5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 OLA1Q9NTK5 396 aaKnown RBP5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 PAK5Q9P286 719 aa5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 COLQQ9Y215 455 aaPredicted RBP5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 AP3B1O00203 1094 aa5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 PGK1P00558 417 aa5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 C6orf222P0C671 652 aaPredicted RBP5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 FAM200BP0CF97 657 aa5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 PECAM1P16284 738 aaPredicted RBP5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 AKAP5P24588 427 aa5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 IGFBP6P24592 240 aaPredicted RBP5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 PSMA2P25787 234 aa5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 OAS2P29728 719 aaKnown RBP5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 HOXA9P31269 272 aa5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 AFF1P51825 1210 aaKnown RBP5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 NDST2P52849 883 aa5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 WASHC5Q12768 1159 aa5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 COL19A1Q14993 1142 aa5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 RALGPS1Q5JS13 557 aa5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 C6orf118Q5T5N4 469 aa5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 WSCD1Q658N2 575 aa5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 LRRC8BQ6P9F7 803 aa5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 MARK2Q7KZI7 788 aaKnown RBP5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 DDX53Q86TM3 631 aaKnown RBP5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 CDKL3Q8IVW4 592 aaPredicted RBP5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 SPPL2BQ8TCT7 592 aa5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 SLC2A14Q8TDB8 520 aa5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 DCAKDQ8WVC6 231 aa5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 MYLPFQ96A32 169 aa5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 CAPZA3Q96KX2 299 aa5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 ZNF408Q9H9D4 720 aa5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 ABCC13Q9NSE7 274 aa5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 DTLQ9NZJ0 730 aa5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 RABGEF1Q9UJ41 708 aa5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 TTLL3Q9Y4R7 772 aa5.57□□□□□ -1.52
PRPF4B-201ENST00000337659 GOLGA6BA6NDN3 693 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 SPOPO43791 374 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 OPHN1O60890 802 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 RNF40O75150 1001 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 STK10O94804 968 aaKnown RBP5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 GAS8O95995 478 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 RHOXF2BP0C7M4 288 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 CCNCP24863 283 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 RPL22P35268 128 aaKnown RBP5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 ADRA1BP35368 520 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 IGBP1P78318 339 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 C4orf50Q6ZRC1 276 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 PIGWQ7Z7B1 504 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 ACOT1Q86TX2 421 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 CHSY1Q86X52 802 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 SLC39A11Q8N1S5 342 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 TOP1MTQ969P6 601 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 MAGOHBQ96A72 148 aaKnown RBP5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 ZFRQ96KR1 1074 aaKnown RBP5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 RHOXF2Q9BQY4 288 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 TRIM51Q9BSJ1 452 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 AP1M1Q9BXS5 423 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 TRMT13Q9NUP7 481 aaKnown RBP5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 DDX43Q9NXZ2 648 aaKnown RBP5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 CWC15Q9P013 229 aaKnown RBP5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 TRHDEQ9UKU6 1024 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 HBS1LQ9Y450 684 aaKnown RBP5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 SNX9Q9Y5X1 595 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 TCF20Q9UGU0 1960 aaKnown RBP5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 E7EVH7 732 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 NRP1O14786 923 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 AMHP03971 560 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 CCDC130P13994 396 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 POU3F3P20264 500 aaPredicted RBP5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 NEK3P51956 506 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 KCNC3Q14003 757 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 CYP4A22Q5TCH4 519 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 LILRA6Q6PI73 481 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 SPATS2Q86XZ4 545 aaKnown RBP5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 LRRC43Q8N309 656 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 FAM172AQ8WUF8 416 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 BCL7CQ8WUZ0 217 aaPredicted RBP5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 HEXIM2Q96MH2 286 aaKnown RBP5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 PIGVQ9NUD9 493 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 TRAPPC3O43617 180 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 RTN3O95197 1032 aaPredicted RBP5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 KRT1P04264 644 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 CD48P09326 243 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 VAV1P15498 845 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 TFE3P19532 575 aaPredicted RBP5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 CNTFP26441 200 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 CHKAP35790 457 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 CCDC15Q0P6D6 951 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms