RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 KIF1CO43896 1103 aaKnown RBP18■□□□□ 0.47
DDX28-201ENST00000332395 PGK1P00558 417 aa18■□□□□ 0.47
DDX28-201ENST00000332395 CHRNA1P02708 482 aa18■□□□□ 0.47
DDX28-201ENST00000332395 CYBAP13498 195 aa18■□□□□ 0.47
DDX28-201ENST00000332395 TKTL1P51854 596 aa18■□□□□ 0.47
DDX28-201ENST00000332395 INHBEP58166 350 aa18■□□□□ 0.47
DDX28-201ENST00000332395 LVRNQ6Q4G3 990 aa18■□□□□ 0.47
DDX28-201ENST00000332395 GIMAP7Q8NHV1 300 aa18■□□□□ 0.47
DDX28-201ENST00000332395 PLCD4Q9BRC7 762 aa18■□□□□ 0.47
DDX28-201ENST00000332395 ARHGEF4Q9NR80 690 aa18■□□□□ 0.47
DDX28-201ENST00000332395 CHST12Q9NRB3 414 aa18■□□□□ 0.47
DDX28-201ENST00000332395 MIOSQ9NXC5 875 aa18■□□□□ 0.47
DDX28-201ENST00000332395 ZC3H7BQ9UGR2 993 aaKnown RBP18■□□□□ 0.47
DDX28-201ENST00000332395 GGT7Q9UJ14 662 aa18■□□□□ 0.47
DDX28-201ENST00000332395 SYNJ2BP-COX16A0A087WUM0 186 aa18■□□□□ 0.47
DDX28-201ENST00000332395 IQANK1A0A1B0GTG1 560 aa18■□□□□ 0.47
DDX28-201ENST00000332395 M0QYT0 321 aa18■□□□□ 0.47
DDX28-201ENST00000332395 INHBAP08476 426 aa18■□□□□ 0.47
DDX28-201ENST00000332395 LHX1P48742 406 aa18■□□□□ 0.47
DDX28-201ENST00000332395 SYPL2Q5VXT5 272 aa18■□□□□ 0.47
DDX28-201ENST00000332395 TMEM86AQ8N2M4 240 aa18■□□□□ 0.47
DDX28-201ENST00000332395 TFB1MQ8WVM0 346 aaKnown RBP18■□□□□ 0.47
DDX28-201ENST00000332395 ALKBH8Q96BT7 664 aaKnown RBP18■□□□□ 0.47
DDX28-201ENST00000332395 SLC2A13Q96QE2 648 aa18■□□□□ 0.47
DDX28-201ENST00000332395 SYT15Q9BQS2 421 aa18■□□□□ 0.47
DDX28-201ENST00000332395 TMPRSS4Q9NRS4 437 aa18■□□□□ 0.47
DDX28-201ENST00000332395 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18■□□□□ 0.47
DDX28-201ENST00000332395 COX16Q9P0S2 106 aa18■□□□□ 0.47
DDX28-201ENST00000332395 TTLL3Q9Y4R7 772 aa18■□□□□ 0.47
DDX28-201ENST00000332395 ARL5CA6NH57 179 aa17.99■□□□□ 0.47
DDX28-201ENST00000332395 GOLGA8RI6L899 631 aa17.99■□□□□ 0.47
DDX28-201ENST00000332395 DGKIO75912 1065 aa17.99■□□□□ 0.47
DDX28-201ENST00000332395 DNAJC8O75937 253 aaPredicted RBP17.99■□□□□ 0.47
DDX28-201ENST00000332395 C1QAP02745 245 aa17.99■□□□□ 0.47
DDX28-201ENST00000332395 SLC10A3P09131 477 aa17.99■□□□□ 0.47
DDX28-201ENST00000332395 TPSB2P20231 275 aa17.99■□□□□ 0.47
DDX28-201ENST00000332395 MAGEA3P43357 314 aa17.99■□□□□ 0.47
DDX28-201ENST00000332395 TPSAB1Q15661 275 aa17.99■□□□□ 0.47
DDX28-201ENST00000332395 FAM133BQ5BKY9 247 aaKnown RBP17.99■□□□□ 0.47
DDX28-201ENST00000332395 HFE2Q6ZVN8 426 aa17.99■□□□□ 0.47
DDX28-201ENST00000332395 ZNF534Q76KX8 674 aa17.99■□□□□ 0.47
DDX28-201ENST00000332395 PRPF39Q86UA1 669 aaKnown RBP17.99■□□□□ 0.47
DDX28-201ENST00000332395 SERINC5Q86VE9 423 aa17.99■□□□□ 0.47
DDX28-201ENST00000332395 BANPQ8N9N5 519 aa17.99■□□□□ 0.47
DDX28-201ENST00000332395 C3orf58Q8NDZ4 430 aa17.99■□□□□ 0.47
DDX28-201ENST00000332395 LRRC8CQ8TDW0 803 aa17.99■□□□□ 0.47
DDX28-201ENST00000332395 LRRC39Q96DD0 335 aa17.99■□□□□ 0.47
DDX28-201ENST00000332395 KLF6Q99612 283 aaPredicted RBP17.99■□□□□ 0.47
DDX28-201ENST00000332395 TIMM13Q9Y5L4 95 aaPredicted RBP17.99■□□□□ 0.47
DDX28-201ENST00000332395 HACD1B0YJ81 288 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 MFSD11O43934 449 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 VAV1P15498 845 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 SCNN1GP51170 649 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 NME3Q13232 169 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 BZW1Q7L1Q6 419 aaKnown RBP17.98■□□□□ 0.47
DDX28-201ENST00000332395 TCP10LQ8TDR4 215 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 RNF139Q8WU17 664 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 HTR3CQ8WXA8 447 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 PCED1BQ96HM7 432 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 ULBP1Q9BZM6 244 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 PRDM16Q9HAZ2 1276 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 SLCO1B3Q9NPD5 702 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 KLHL14Q9P2G3 628 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 PHTF1Q9UMS5 762 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 STARD13Q9Y3M8 1113 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 MYBPHLA2RUH7 354 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 H3BRJ5 948 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 NRP1O14786 923 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 TM9SF1O15321 606 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 UBOX5O94941 541 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 MT-ND3P03897 115 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 ADRA1DP25100 572 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 RABGGTBP53611 331 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 FAAP100Q0VG06 881 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 SEMA5AQ13591 1074 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 DSTYKQ6XUX3 929 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 AGMOQ6ZNB7 445 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 FAM35AQ86V20 835 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 CCDC63Q8NA47 563 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 TRIB2Q92519 343 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 RMDN2Q96LZ7 410 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 LGMNQ99538 433 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 PLAC1Q9HBJ0 212 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 PIGVQ9NUD9 493 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 HAUS2Q9NVX0 235 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 GIT1Q9Y2X7 761 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 NR2E3Q9Y5X4 410 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 TSC2P49815 1807 aa17.98■□□□□ 0.47
DDX28-201ENST00000332395 AP1G2O75843 785 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 FBXO21O94952 628 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 DEUP1Q05D60 604 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 MGAT3Q09327 533 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 SNCBQ16143 134 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 SEPT7Q16181 437 aaKnown RBP17.97■□□□□ 0.47
DDX28-201ENST00000332395 MFSD14CQ5VZR4 134 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 RNF43Q68DV7 783 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 SLC26A11Q86WA9 606 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 PARP9Q8IXQ6 854 aa17.97■□□□□ 0.47
DDX28-201ENST00000332395 GBP7Q8N8V2 638 aaPredicted RBP17.97■□□□□ 0.47
DDX28-201ENST00000332395 SMOQ99835 787 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms