RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 EBNA1BP2Q99848 306 aaKnown RBP15.07■□□□□ 0
TPM3-206ENST00000330188 DUSP16Q9BY84 665 aa15.07■□□□□ 0
TPM3-206ENST00000330188 RCOR3Q9P2K3 495 aaPredicted RBP15.07■□□□□ 0
TPM3-206ENST00000330188 NR2E3Q9Y5X4 410 aa15.07■□□□□ 0
TPM3-206ENST00000330188 TSC2P49815 1807 aa15.06■□□□□ 0
TPM3-206ENST00000330188 HACD1B0YJ81 288 aa15.06■□□□□ 0
TPM3-206ENST00000330188 C2CD2LO14523 706 aa15.06■□□□□ 0
TPM3-206ENST00000330188 PTGESO14684 152 aa15.06■□□□□ 0
TPM3-206ENST00000330188 CAPN15O75808 1086 aa15.06■□□□□ 0
TPM3-206ENST00000330188 ATP5HO75947 161 aa15.06■□□□□ 0
TPM3-206ENST00000330188 BEST1O76090 585 aa15.06■□□□□ 0
TPM3-206ENST00000330188 TROVE2P10155 538 aaKnown RBP eCLIP15.06■□□□□ 0
TPM3-206ENST00000330188 LRPAP1P30533 357 aa15.06■□□□□ 0
TPM3-206ENST00000330188 ARL4AP40617 200 aa15.06■□□□□ 0
TPM3-206ENST00000330188 PITX1P78337 314 aaPredicted RBP15.06■□□□□ 0
TPM3-206ENST00000330188 PAQR9Q6ZVX9 377 aa15.06■□□□□ 0
TPM3-206ENST00000330188 TFB1MQ8WVM0 346 aaKnown RBP15.06■□□□□ 0
TPM3-206ENST00000330188 TRIM56Q9BRZ2 755 aaKnown RBP15.06■□□□□ 0
TPM3-206ENST00000330188 KANSL3Q9P2N6 904 aa15.06■□□□□ 0
TPM3-206ENST00000330188 MFSD11O43934 449 aa15.05■□□□□ 0
TPM3-206ENST00000330188 UGT1A9O60656 530 aa15.05■□□□□ 0
TPM3-206ENST00000330188 KRT37O76014 449 aa15.05■□□□□ 0
TPM3-206ENST00000330188 CSH1P0DML2 217 aa15.05■□□□□ 0
TPM3-206ENST00000330188 CSH2P0DML3 217 aa15.05■□□□□ 0
TPM3-206ENST00000330188 ACAT1P24752 427 aaKnown RBP15.05■□□□□ 0
TPM3-206ENST00000330188 GRIA1P42261 906 aa15.05■□□□□ 0
TPM3-206ENST00000330188 CPT1AP50416 773 aa15.05■□□□□ 0
TPM3-206ENST00000330188 MRPS5P82675 430 aaKnown RBP15.05■□□□□ 0
TPM3-206ENST00000330188 OVGP1Q12889 678 aa15.05■□□□□ 0
TPM3-206ENST00000330188 CCL14Q16627 93 aa15.05■□□□□ 0
TPM3-206ENST00000330188 CDHR3Q6ZTQ4 885 aa15.05■□□□□ 0
TPM3-206ENST00000330188 NLRP9Q7RTR0 991 aa15.05■□□□□ 0
TPM3-206ENST00000330188 BNIPLQ7Z465 357 aa15.05■□□□□ 0
TPM3-206ENST00000330188 PSTKQ8IV42 348 aaKnown RBP15.05■□□□□ 0
TPM3-206ENST00000330188 RFWD2Q8NHY2 731 aa15.05■□□□□ 0
TPM3-206ENST00000330188 GSDMBQ8TAX9 411 aa15.05■□□□□ 0
TPM3-206ENST00000330188 HTR3CQ8WXA8 447 aa15.05■□□□□ 0
TPM3-206ENST00000330188 NT5C3BQ969T7 300 aa15.05■□□□□ 0
TPM3-206ENST00000330188 TTC17Q96AE7 1141 aa15.05■□□□□ 0
TPM3-206ENST00000330188 SRPK1Q96SB4 655 aaKnown RBP15.05■□□□□ 0
TPM3-206ENST00000330188 UGT1A7Q9HAW7 530 aa15.05■□□□□ 0
TPM3-206ENST00000330188 UGT1A10Q9HAW8 530 aa15.05■□□□□ 0
TPM3-206ENST00000330188 UGT1A8Q9HAW9 530 aa15.05■□□□□ 0
TPM3-206ENST00000330188 XAB2Q9HCS7 855 aaKnown RBP15.05■□□□□ 0
TPM3-206ENST00000330188 ARHGEF4Q9NR80 690 aa15.05■□□□□ 0
TPM3-206ENST00000330188 MAD1L1Q9Y6D9 718 aa15.05■□□□□ 0
TPM3-206ENST00000330188 PCNTO95613 3336 aa15.05■□□□□ 0
TPM3-206ENST00000330188 C17orf102A2RUQ5 167 aa15.05■□□□□ -0
TPM3-206ENST00000330188 FAM159BA6NKW6 160 aa15.05■□□□□ -0
TPM3-206ENST00000330188 CYB561D2O14569 222 aa15.05■□□□□ -0
TPM3-206ENST00000330188 COPEO14579 308 aa15.05■□□□□ -0
TPM3-206ENST00000330188 NPR3P17342 541 aa15.05■□□□□ -0
TPM3-206ENST00000330188 PTPN1P18031 435 aaKnown RBP15.05■□□□□ -0
TPM3-206ENST00000330188 IGFBP6P24592 240 aaPredicted RBP15.05■□□□□ -0
TPM3-206ENST00000330188 TARSP26639 723 aaKnown RBP15.05■□□□□ -0
TPM3-206ENST00000330188 SLC8A1P32418 973 aa15.05■□□□□ -0
TPM3-206ENST00000330188 CCNFP41002 786 aa15.05■□□□□ -0
TPM3-206ENST00000330188 DCAF6Q58WW2 860 aa15.05■□□□□ -0
TPM3-206ENST00000330188 ANKRD20A2Q5SQ80 823 aa15.05■□□□□ -0
TPM3-206ENST00000330188 ANKRD20A1Q5TYW2 823 aa15.05■□□□□ -0
TPM3-206ENST00000330188 ANKRD20A3Q5VUR7 823 aa15.05■□□□□ -0
TPM3-206ENST00000330188 TRMT10BQ6PF06 316 aaKnown RBP15.05■□□□□ -0
TPM3-206ENST00000330188 DENND5BQ6ZUT9 1274 aa15.05■□□□□ -0
TPM3-206ENST00000330188 C2orf69Q8N8R5 385 aa15.05■□□□□ -0
TPM3-206ENST00000330188 PPP1R10Q96QC0 940 aaKnown RBP15.05■□□□□ -0
TPM3-206ENST00000330188 LGMNQ99538 433 aa15.05■□□□□ -0
TPM3-206ENST00000330188 TSSK1BQ9BXA7 367 aa15.05■□□□□ -0
TPM3-206ENST00000330188 TMPRSS4Q9NRS4 437 aa15.05■□□□□ -0
TPM3-206ENST00000330188 STK38LQ9Y2H1 464 aa15.05■□□□□ -0
TPM3-206ENST00000330188 PCDHA11Q9Y5I1 949 aa15.05■□□□□ -0
TPM3-206ENST00000330188 A0A0A0MRY4 1105 aa15.04■□□□□ -0
TPM3-206ENST00000330188 A8MUI8 341 aa15.04■□□□□ -0
TPM3-206ENST00000330188 RFPL1O75677 317 aa15.04■□□□□ -0
TPM3-206ENST00000330188 T-ENOLP0DO92 83 aa15.04■□□□□ -0
TPM3-206ENST00000330188 BGNP21810 368 aa15.04■□□□□ -0
TPM3-206ENST00000330188 NOS2P35228 1153 aa15.04■□□□□ -0
TPM3-206ENST00000330188 NDUFV1P49821 464 aa15.04■□□□□ -0
TPM3-206ENST00000330188 SLC8A3P57103 927 aa15.04■□□□□ -0
TPM3-206ENST00000330188 PRKD1Q15139 912 aaPredicted RBP15.04■□□□□ -0
TPM3-206ENST00000330188 PREPLQ4J6C6 727 aaPredicted RBP15.04■□□□□ -0
TPM3-206ENST00000330188 SPDYAQ5MJ70 313 aa15.04■□□□□ -0
TPM3-206ENST00000330188 WLSQ5T9L3 541 aa15.04■□□□□ -0
TPM3-206ENST00000330188 WSCD1Q658N2 575 aa15.04■□□□□ -0
TPM3-206ENST00000330188 TWF2Q6IBS0 349 aaKnown RBP15.04■□□□□ -0
TPM3-206ENST00000330188 CLEC20AQ6ZU45 233 aa15.04■□□□□ -0
TPM3-206ENST00000330188 NME8Q8N427 588 aa15.04■□□□□ -0
TPM3-206ENST00000330188 KCTD13Q8WZ19 329 aa15.04■□□□□ -0
TPM3-206ENST00000330188 UTP4Q969X6 686 aaKnown RBP15.04■□□□□ -0
TPM3-206ENST00000330188 SPATA13Q96N96 652 aa15.04■□□□□ -0
TPM3-206ENST00000330188 NPY6RQ99463 290 aa15.04■□□□□ -0
TPM3-206ENST00000330188 LRMDAQ9H2I8 198 aa15.04■□□□□ -0
TPM3-206ENST00000330188 GABRDO14764 452 aa15.04■□□□□ -0
TPM3-206ENST00000330188 CELF2O95319 508 aaKnown RBP15.04■□□□□ -0
TPM3-206ENST00000330188 HOXC8P31273 242 aa15.04■□□□□ -0
TPM3-206ENST00000330188 FDFT1P37268 417 aa15.04■□□□□ -0
TPM3-206ENST00000330188 SERPINB4P48594 390 aa15.04■□□□□ -0
TPM3-206ENST00000330188 BMPR2Q13873 1038 aa15.04■□□□□ -0
TPM3-206ENST00000330188 NBPF20Q3BBV1 942 aa15.04■□□□□ -0
TPM3-206ENST00000330188 LGSNQ5TDP6 509 aa15.04■□□□□ -0
TPM3-206ENST00000330188 KIAA0319Q5VV43 1072 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms