RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 GOT1P17174 413 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 CHKAP35790 457 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 ALDH7A1P49419 539 aaKnown RBP18.49■□□□□ 0.55
RAB39A-201ENST00000320578 DPYSQ14117 519 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 PAFAH1B3Q15102 231 aaKnown RBP18.49■□□□□ 0.55
RAB39A-201ENST00000320578 BRMS1LQ5PSV4 323 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 EMC10Q5UCC4 262 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 BTBD8Q5XKL5 378 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 NCBP2-AS2Q69YL0 99 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 SCN4BQ8IWT1 228 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 FAM71DQ8N9W8 422 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 OSBPL2Q9H1P3 480 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 SMOC2Q9H3U7 446 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 WDCPQ9H6R7 721 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 ARHGEF4Q9NR80 690 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 PAK5Q9P286 719 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 BACE2Q9Y5Z0 518 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 MICAL3Q7RTP6 2002 aa18.48■□□□□ 0.55
RAB39A-201ENST00000320578 GOLGA6CA6NDK9 693 aa18.48■□□□□ 0.55
RAB39A-201ENST00000320578 EIF3HO15372 352 aaKnown RBP eCLIP18.48■□□□□ 0.55
RAB39A-201ENST00000320578 RTN3O95197 1032 aaPredicted RBP18.48■□□□□ 0.55
RAB39A-201ENST00000320578 TTC4O95801 387 aa18.48■□□□□ 0.55
RAB39A-201ENST00000320578 GOLGA6DP0CG33 693 aa18.48■□□□□ 0.55
RAB39A-201ENST00000320578 HTR7P34969 479 aa18.48■□□□□ 0.55
RAB39A-201ENST00000320578 CDR1P51861 262 aa18.48■□□□□ 0.55
RAB39A-201ENST00000320578 SLC45A4Q5BKX6 768 aa18.48■□□□□ 0.55
RAB39A-201ENST00000320578 AGBL2Q5U5Z8 902 aa18.48■□□□□ 0.55
RAB39A-201ENST00000320578 SCD5Q86SK9 330 aa18.48■□□□□ 0.55
RAB39A-201ENST00000320578 PRUNE1Q86TP1 453 aa18.48■□□□□ 0.55
RAB39A-201ENST00000320578 TAC4Q86UU9 113 aa18.48■□□□□ 0.55
RAB39A-201ENST00000320578 PYROXD2Q8N2H3 581 aa18.48■□□□□ 0.55
RAB39A-201ENST00000320578 EDEM1Q92611 657 aa18.48■□□□□ 0.55
RAB39A-201ENST00000320578 ARL8AQ96BM9 186 aa18.48■□□□□ 0.55
RAB39A-201ENST00000320578 ZNF689Q96CS4 500 aaPredicted RBP18.48■□□□□ 0.55
RAB39A-201ENST00000320578 OLFM3Q96PB7 478 aa18.48■□□□□ 0.55
RAB39A-201ENST00000320578 ROPN1BQ9BZX4 212 aaPredicted RBP18.48■□□□□ 0.55
RAB39A-201ENST00000320578 ROPN1Q9HAT0 212 aaPredicted RBP18.48■□□□□ 0.55
RAB39A-201ENST00000320578 GOLGA6AQ9NYA3 693 aa18.48■□□□□ 0.55
RAB39A-201ENST00000320578 HEY1Q9Y5J3 304 aa18.48■□□□□ 0.55
RAB39A-201ENST00000320578 FNDC1Q4ZHG4 1894 aaPredicted RBP18.48■□□□□ 0.55
RAB39A-201ENST00000320578 AMHP03971 560 aa18.47■□□□□ 0.55
RAB39A-201ENST00000320578 AMPD1P23109 780 aa18.47■□□□□ 0.55
RAB39A-201ENST00000320578 ACTN2P35609 894 aa18.47■□□□□ 0.55
RAB39A-201ENST00000320578 CTCFP49711 727 aaPredicted RBP18.47■□□□□ 0.55
RAB39A-201ENST00000320578 SLC29A2Q14542 456 aa18.47■□□□□ 0.55
RAB39A-201ENST00000320578 LRRC26Q2I0M4 334 aa18.47■□□□□ 0.55
RAB39A-201ENST00000320578 USP41Q3LFD5 358 aa18.47■□□□□ 0.55
RAB39A-201ENST00000320578 TTMPQ5BVD1 217 aa18.47■□□□□ 0.55
RAB39A-201ENST00000320578 RTP2Q5QGT7 225 aa18.47■□□□□ 0.55
RAB39A-201ENST00000320578 MSANTD2Q6P1R3 559 aa18.47■□□□□ 0.55
RAB39A-201ENST00000320578 RFX8Q6ZV50 586 aa18.47■□□□□ 0.55
RAB39A-201ENST00000320578 PDZD4Q76G19 769 aaPredicted RBP18.47■□□□□ 0.55
RAB39A-201ENST00000320578 ZC3H18Q86VM9 953 aaKnown RBP18.47■□□□□ 0.55
RAB39A-201ENST00000320578 NAT8LQ8N9F0 302 aa18.47■□□□□ 0.55
RAB39A-201ENST00000320578 PRCCQ92733 491 aaPredicted RBP18.47■□□□□ 0.55
RAB39A-201ENST00000320578 EXOC4Q96A65 974 aa18.47■□□□□ 0.55
RAB39A-201ENST00000320578 PAWRQ96IZ0 340 aaKnown RBP18.47■□□□□ 0.55
RAB39A-201ENST00000320578 ATP6V1G3Q96LB4 118 aa18.47■□□□□ 0.55
RAB39A-201ENST00000320578 QKIQ96PU8 341 aaKnown RBP eCLIP18.47■□□□□ 0.55
RAB39A-201ENST00000320578 CDC42EP4Q9H3Q1 356 aaKnown RBP18.47■□□□□ 0.55
RAB39A-201ENST00000320578 ARHGEF38Q9NXL2 777 aa18.47■□□□□ 0.55
RAB39A-201ENST00000320578 PSD3Q9NYI0 1048 aa18.47■□□□□ 0.55
RAB39A-201ENST00000320578 ADAM21Q9UKJ8 722 aa18.47■□□□□ 0.55
RAB39A-201ENST00000320578 VWA8A3KMH1 1905 aa18.47■□□□□ 0.55
RAB39A-201ENST00000320578 MTMR11A4FU01 709 aa18.46■□□□□ 0.55
RAB39A-201ENST00000320578 EEF2KO00418 725 aaKnown RBP18.46■□□□□ 0.55
RAB39A-201ENST00000320578 DCLK1O15075 740 aa18.46■□□□□ 0.55
RAB39A-201ENST00000320578 IRAK2O43187 625 aa18.46■□□□□ 0.55
RAB39A-201ENST00000320578 PSEN1P49768 467 aa18.46■□□□□ 0.55
RAB39A-201ENST00000320578 IFFO1Q0D2I5 559 aa18.46■□□□□ 0.55
RAB39A-201ENST00000320578 SLC10A2Q12908 348 aaPredicted RBP18.46■□□□□ 0.55
RAB39A-201ENST00000320578 SLC8B1Q6J4K2 584 aa18.46■□□□□ 0.55
RAB39A-201ENST00000320578 CPT1BQ92523 772 aa18.46■□□□□ 0.55
RAB39A-201ENST00000320578 IGSF21Q96ID5 467 aa18.46■□□□□ 0.55
RAB39A-201ENST00000320578 TTC25Q96NG3 672 aa18.46■□□□□ 0.55
RAB39A-201ENST00000320578 HAPLN3Q96S86 360 aa18.46■□□□□ 0.55
RAB39A-201ENST00000320578 FRMD8Q9BZ67 464 aaPredicted RBP18.46■□□□□ 0.55
RAB39A-201ENST00000320578 MAGEB5Q9BZ81 275 aa18.46■□□□□ 0.55
RAB39A-201ENST00000320578 DTLQ9NZJ0 730 aa18.46■□□□□ 0.55
RAB39A-201ENST00000320578 HCSTQ9UBK5 93 aa18.46■□□□□ 0.55
RAB39A-201ENST00000320578 MTRRQ9UBK8 725 aa18.46■□□□□ 0.55
RAB39A-201ENST00000320578 SYNJ2BP-COX16A0A087WUM0 186 aa18.46■□□□□ 0.55
RAB39A-201ENST00000320578 C5orf60A6NFR6 353 aa18.46■□□□□ 0.55
RAB39A-201ENST00000320578 GCATO75600 419 aa18.46■□□□□ 0.55
RAB39A-201ENST00000320578 ABHD2P08910 425 aa18.46■□□□□ 0.55
RAB39A-201ENST00000320578 HAPLN1P10915 354 aaPredicted RBP18.46■□□□□ 0.55
RAB39A-201ENST00000320578 MAGEA6P43360 314 aa18.46■□□□□ 0.55
RAB39A-201ENST00000320578 RPL10AP62906 217 aaKnown RBP18.46■□□□□ 0.55
RAB39A-201ENST00000320578 GBE1Q04446 702 aa18.46■□□□□ 0.55
RAB39A-201ENST00000320578 PPP2R5DQ14738 602 aa18.46■□□□□ 0.55
RAB39A-201ENST00000320578 TERF2Q15554 542 aa18.46■□□□□ 0.55
RAB39A-201ENST00000320578 NECAB2Q7Z6G3 386 aa18.46■□□□□ 0.55
RAB39A-201ENST00000320578 CCDC25Q86WR0 208 aa18.46■□□□□ 0.55
RAB39A-201ENST00000320578 TMEM173Q86WV6 379 aaPredicted RBP18.46■□□□□ 0.55
RAB39A-201ENST00000320578 FAM76AQ8TAV0 307 aa18.46■□□□□ 0.55
RAB39A-201ENST00000320578 ADAM32Q8TC27 787 aa18.46■□□□□ 0.55
RAB39A-201ENST00000320578 BCL7CQ8WUZ0 217 aaPredicted RBP18.46■□□□□ 0.55
RAB39A-201ENST00000320578 RBM15Q96T37 977 aaKnown RBP eCLIP18.46■□□□□ 0.55
RAB39A-201ENST00000320578 BRD8Q9H0E9 1235 aa18.46■□□□□ 0.55
RAB39A-201ENST00000320578 RC3H2Q9HBD1 1191 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms