RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 FOXN2P32314 431 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 MSH2P43246 934 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 SEPT7Q16181 437 aaKnown RBP14.7□□□□□ -0.06
VRK3-201ENST00000316763 ZC3H12AQ5D1E8 599 aaKnown RBP14.7□□□□□ -0.06
VRK3-201ENST00000316763 RGS9BPQ6ZS82 235 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 CRIPAKQ8N1N5 446 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 OR6B3Q8NGW1 331 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 TEKT4Q8WW24 435 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 UROC1Q96N76 676 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 RNF157Q96PX1 679 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 TBCBQ99426 244 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 PAAF1Q9BRP4 392 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 DNAI2Q9GZS0 605 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 RXFP1Q9HBX9 757 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 INPP5FQ9Y2H2 1132 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 STARD13Q9Y3M8 1113 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 CLUHO75153 1309 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 ABHD14A-ACY1A0A1B0GW23 586 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 CYB561D2O14569 222 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 GABRDO14764 452 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 CHUKO15111 745 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 BANF1O75531 89 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 FGBP02675 491 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 TGM2P21980 687 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 PAX3P23760 479 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 SDC4P31431 198 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 GNL1P36915 607 aaPredicted RBP14.7□□□□□ -0.06
VRK3-201ENST00000316763 SLC6A3Q01959 620 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 DSC1Q08554 894 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 MMRN1Q13201 1228 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 PDK4Q16654 411 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 CDO1Q16878 200 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 TMEM240Q5SV17 173 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 ADGRD1Q6QNK2 874 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.7□□□□□ -0.06
VRK3-201ENST00000316763 OTOP2Q7RTS6 562 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 VSIG1Q86XK7 387 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 ADGRF2Q8IZF7 708 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 C4orf33Q8N1A6 199 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 C12orf29Q8N999 325 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 LRRC8CQ8TDW0 803 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 FBF1Q8TES7 1133 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 ALKBH8Q96BT7 664 aaKnown RBP14.7□□□□□ -0.06
VRK3-201ENST00000316763 MRRFQ96E11 262 aaKnown RBP14.7□□□□□ -0.06
VRK3-201ENST00000316763 SENP8Q96LD8 212 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 FRMD8Q9BZ67 464 aaPredicted RBP14.7□□□□□ -0.06
VRK3-201ENST00000316763 PAK5Q9P286 719 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 PIK3R2O00459 728 aa14.69□□□□□ -0.06
VRK3-201ENST00000316763 SPAG6O75602 509 aa14.69□□□□□ -0.06
VRK3-201ENST00000316763 LMO2P25791 158 aa14.69□□□□□ -0.06
VRK3-201ENST00000316763 SSTR1P30872 391 aa14.69□□□□□ -0.06
VRK3-201ENST00000316763 RGS7P49802 495 aa14.69□□□□□ -0.06
VRK3-201ENST00000316763 C15orf59Q2T9L4 293 aaPredicted RBP14.69□□□□□ -0.06
VRK3-201ENST00000316763 GALNTL6Q49A17 601 aa14.69□□□□□ -0.06
VRK3-201ENST00000316763 CCDC14Q49A88 953 aa14.69□□□□□ -0.06
VRK3-201ENST00000316763 MSS51Q4VC12 460 aa14.69□□□□□ -0.06
VRK3-201ENST00000316763 NOMO2Q5JPE7 1267 aa14.69□□□□□ -0.06
VRK3-201ENST00000316763 PPP1R26Q5T8A7 1209 aaPredicted RBP14.69□□□□□ -0.06
VRK3-201ENST00000316763 SCYL2Q6P3W7 929 aa14.69□□□□□ -0.06
VRK3-201ENST00000316763 CD300LGQ6UXG3 332 aa14.69□□□□□ -0.06
VRK3-201ENST00000316763 ACOT1Q86TX2 421 aa14.69□□□□□ -0.06
VRK3-201ENST00000316763 ZC3H18Q86VM9 953 aaKnown RBP14.69□□□□□ -0.06
VRK3-201ENST00000316763 ZDHHC17Q8IUH5 632 aa14.69□□□□□ -0.06
VRK3-201ENST00000316763 CYTH2Q99418 400 aa14.69□□□□□ -0.06
VRK3-201ENST00000316763 PAFAH2Q99487 392 aa14.69□□□□□ -0.06
VRK3-201ENST00000316763 SNX25Q9H3E2 840 aa14.69□□□□□ -0.06
VRK3-201ENST00000316763 KANSL3Q9P2N6 904 aa14.69□□□□□ -0.06
VRK3-201ENST00000316763 A8MXQ7 604 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 APOL1O14791 398 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 CHADO15335 359 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 GRAP2O75791 330 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 TMEM63AO94886 807 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 RPA3P35244 121 aaPredicted RBP14.68□□□□□ -0.06
VRK3-201ENST00000316763 GAD2Q05329 585 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 CCDC15Q0P6D6 951 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 PKDCCQ504Y2 493 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 SH3PXD2AQ5TCZ1 1133 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 WSCD1Q658N2 575 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 ARHGAP17Q68EM7 881 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 C1orf228Q6PIY5 440 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 NPNTQ6UXI9 565 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 CYP4V2Q6ZWL3 525 aaPredicted RBP14.68□□□□□ -0.06
VRK3-201ENST00000316763 OSTM1Q86WC4 334 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 TMEM86AQ8N2M4 240 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 TAB3Q8N5C8 712 aaPredicted RBP14.68□□□□□ -0.06
VRK3-201ENST00000316763 STK32AQ8WU08 396 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 FAF2Q96CS3 445 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 DHRS4Q9BTZ2 278 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 SLC4A5Q9BY07 1137 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 DPEP3Q9H4B8 488 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 ECT2Q9H8V3 914 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 NGRNQ9NPE2 291 aaKnown RBP14.68□□□□□ -0.06
VRK3-201ENST00000316763 IKBKGQ9Y6K9 419 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 CEP290O15078 2479 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 A0A1W2PPM1 405 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 TCRBV7S3A2A0A539 114 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 HCRTO43612 131 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 TYROBPO43914 113 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 B3GAT3O94766 335 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 KRT4P19013 534 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms