RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 ARHGAP44Q17R89 818 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 CIAPIN1Q6FI81 312 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 GAS2L3Q86XJ1 694 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 DCAKDQ8WVC6 231 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 SEC16BQ96JE7 1060 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 KRT84Q9NSB2 600 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 MRTO4Q9UKD2 239 aaKnown RBP4.13□□□□□ -1.75
USH2A-201ENST00000307340 HEATR9A2RTY3 570 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 CHRNA5P30532 468 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 PSMC1P62191 440 aaKnown RBP4.13□□□□□ -1.75
USH2A-201ENST00000307340 ARHGEF7Q14155 803 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 CEP78Q5JTW2 689 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 KLHL35Q6PF15 583 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 ZBED8Q8IZ13 594 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 C2orf15Q8WU43 125 aaKnown RBP4.13□□□□□ -1.75
USH2A-201ENST00000307340 TEKT4Q8WW24 435 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 PCDH18Q9HCL0 1135 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 IFT80Q9P2H3 777 aaPredicted RBP4.13□□□□□ -1.75
USH2A-201ENST00000307340 TBX20Q9UMR3 447 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 NRCAMQ92823 1304 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 R3HDM1Q15032 1099 aaKnown RBP4.13□□□□□ -1.75
USH2A-201ENST00000307340 CDC73Q6P1J9 531 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 ASIC4Q96FT7 647 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 DMTF1Q9Y222 760 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 CRYBG1Q9Y4K1 1723 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 F8VZ95 297 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 UNC5CO95185 931 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 CCDC159P0C7I6 412 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 PDCLQ13371 301 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 KIZQ2M2Z5 673 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 ATP6AP1LQ52LC2 224 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 KLHL26Q53HC5 615 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 PLD3Q8IV08 490 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 ZNF420Q8TAQ5 688 aaPredicted RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 TEFMQ96QE5 360 aaKnown RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 SPATA9Q9BWV2 254 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 USP18Q9UMW8 372 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 TBC1D30Q9Y2I9 924 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 ZBTB1Q9Y2K1 713 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 OGTO15294 1046 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 PRPF4O43172 522 aaKnown RBP eCLIP4.12□□□□□ -1.75
USH2A-201ENST00000307340 CSH1P0DML2 217 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 CSH2P0DML3 217 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 PPM1AP35813 382 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 NR1H2P55055 460 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 PIWIL2Q8TC59 973 aaKnown RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 ZNF75CPQ92670 426 aaPredicted RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 CNDP1Q96KN2 507 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 FUT8Q9BYC5 575 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 PNPLA8Q9NP80 782 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 KLHL42Q9P2K6 505 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 ADGRE2Q9UHX3 823 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 PCDHA3Q9Y5H8 950 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 DENND3A2RUS2 1198 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 AHCYL1O43865 530 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 GADD45BO75293 160 aaPredicted RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 NDUFS3O75489 264 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 TRPC1P48995 793 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 GEMP55040 296 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.12□□□□□ -1.75
USH2A-201ENST00000307340 TMTC4Q5T4D3 741 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 NSMFQ6X4W1 530 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 BRSK2Q8IWQ3 736 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 UNC5BQ8IZJ1 945 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 TTC16Q8NEE8 873 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 TMEM47Q9BQJ4 181 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 KIAA1683Q9H0B3 1180 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 EPB41L4BQ9H329 900 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 BARX2Q9UMQ3 279 aaPredicted RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 SNX9Q9Y5X1 595 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 GMEB1Q9Y692 573 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 AIREO43918 545 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 TMEM127O75204 238 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 IL6P05231 212 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 CRKP46108 304 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 MRPS15P82914 257 aaKnown RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 DDX60LQ5H9U9 1706 aaKnown RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 EIF5AL1Q6IS14 154 aaKnown RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 CPNE9Q8IYJ1 553 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 ADGRF4Q8IZF3 695 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 FAM149B1Q96BN6 582 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 EFHD2Q96C19 240 aaPredicted RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 SMARCD1Q96GM5 515 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 PUS7LQ9H0K6 701 aaKnown RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 C14orf105Q9NVL8 296 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 TRPS1Q9UHF7 1281 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 MAGED2Q9UNF1 606 aaPredicted RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 IPPQ9Y573 584 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 TRIM17Q9Y577 477 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 KIAA1217Q5T5P2 1943 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 PENKP01210 267 aaPredicted RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 IRAK1P51617 712 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 ARID5BQ14865 1188 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 PLEKHM3Q6ZWE6 761 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 E2F7Q96AV8 911 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 TCF12Q99081 682 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 ZCCHC17Q9NP64 241 aaKnown RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 KCNJ14Q9UNX9 436 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 DNAJC16Q9Y2G8 782 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 PCDHGB1Q9Y5G3 927 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms