RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 ELF4Q99607 663 aaPredicted RBP12.47□□□□□ -0.41
SMIM4-201ENST00000307106 MED10Q9BTT4 135 aa12.47□□□□□ -0.41
SMIM4-201ENST00000307106 ACE2Q9BYF1 805 aaPredicted RBP12.47□□□□□ -0.41
SMIM4-201ENST00000307106 BTBD1Q9H0C5 482 aa12.47□□□□□ -0.41
SMIM4-201ENST00000307106 DMAP1Q9NPF5 467 aaPredicted RBP12.47□□□□□ -0.41
SMIM4-201ENST00000307106 SEL1LQ9UBV2 794 aa12.47□□□□□ -0.41
SMIM4-201ENST00000307106 CLCA2Q9UQC9 943 aa12.47□□□□□ -0.41
SMIM4-201ENST00000307106 PIEZO2Q9H5I5 2752 aa12.46□□□□□ -0.41
SMIM4-201ENST00000307106 VILLO15195 856 aa12.46□□□□□ -0.41
SMIM4-201ENST00000307106 PENKP01210 267 aaPredicted RBP12.46□□□□□ -0.41
SMIM4-201ENST00000307106 FAM163BP0C2L3 166 aa12.46□□□□□ -0.41
SMIM4-201ENST00000307106 GLDCP23378 1020 aa12.46□□□□□ -0.41
SMIM4-201ENST00000307106 CASP5P51878 434 aa12.46□□□□□ -0.41
SMIM4-201ENST00000307106 BCAT1P54687 386 aa12.46□□□□□ -0.41
SMIM4-201ENST00000307106 UCNP55089 124 aa12.46□□□□□ -0.41
SMIM4-201ENST00000307106 PCBP4P57723 403 aaKnown RBP12.46□□□□□ -0.41
SMIM4-201ENST00000307106 EIF4HQ15056 248 aaKnown RBP12.46□□□□□ -0.41
SMIM4-201ENST00000307106 SURF1Q15526 300 aa12.46□□□□□ -0.41
SMIM4-201ENST00000307106 WDR72Q3MJ13 1102 aa12.46□□□□□ -0.41
SMIM4-201ENST00000307106 MCTP1Q6DN14 999 aa12.46□□□□□ -0.41
SMIM4-201ENST00000307106 Q6ZNB5 142 aa12.46□□□□□ -0.41
SMIM4-201ENST00000307106 PAQR9Q6ZVX9 377 aa12.46□□□□□ -0.41
SMIM4-201ENST00000307106 TRAPPC11Q7Z392 1133 aa12.46□□□□□ -0.41
SMIM4-201ENST00000307106 ANKS1BQ7Z6G8 1248 aa12.46□□□□□ -0.41
SMIM4-201ENST00000307106 WDR49Q8IV35 697 aa12.46□□□□□ -0.41
SMIM4-201ENST00000307106 SORCS1Q8WY21 1168 aa12.46□□□□□ -0.41
SMIM4-201ENST00000307106 SMARCD1Q96GM5 515 aa12.46□□□□□ -0.41
SMIM4-201ENST00000307106 ORAI3Q9BRQ5 295 aa12.46□□□□□ -0.41
SMIM4-201ENST00000307106 CIPCQ9C0C6 399 aa12.46□□□□□ -0.41
SMIM4-201ENST00000307106 CYLDQ9NQC7 956 aa12.46□□□□□ -0.41
SMIM4-201ENST00000307106 ELOVL2Q9NXB9 296 aa12.46□□□□□ -0.41
SMIM4-201ENST00000307106 COL12A1Q99715 3063 aa12.45□□□□□ -0.42
SMIM4-201ENST00000307106 ZNF233A6NK53 670 aa12.45□□□□□ -0.42
SMIM4-201ENST00000307106 MDM4O15151 490 aa12.45□□□□□ -0.42
SMIM4-201ENST00000307106 CST3P01034 146 aaPredicted RBP12.45□□□□□ -0.42
SMIM4-201ENST00000307106 CSRP3P50461 194 aa12.45□□□□□ -0.42
SMIM4-201ENST00000307106 RACK1P63244 317 aaKnown RBP12.45□□□□□ -0.42
SMIM4-201ENST00000307106 ARID5AQ03989 594 aa12.45□□□□□ -0.42
SMIM4-201ENST00000307106 ILKQ13418 452 aa12.45□□□□□ -0.42
SMIM4-201ENST00000307106 CAMK2GQ13555 558 aaPredicted RBP12.45□□□□□ -0.42
SMIM4-201ENST00000307106 SHBQ15464 509 aa12.45□□□□□ -0.42
SMIM4-201ENST00000307106 KIF26BQ2KJY2 2108 aa12.45□□□□□ -0.42
SMIM4-201ENST00000307106 FYB2Q5VWT5 728 aa12.45□□□□□ -0.42
SMIM4-201ENST00000307106 CACTIN-AS1Q8N1I8 211 aa12.45□□□□□ -0.42
SMIM4-201ENST00000307106 RBBP8NLQ8NC74 664 aaPredicted RBP12.45□□□□□ -0.42
SMIM4-201ENST00000307106 SAP25Q8TEE9 199 aa12.45□□□□□ -0.42
SMIM4-201ENST00000307106 TTC9Q92623 222 aa12.45□□□□□ -0.42
SMIM4-201ENST00000307106 PIWIL1Q96J94 861 aaKnown RBP12.45□□□□□ -0.42
SMIM4-201ENST00000307106 FBXO44Q9H4M3 255 aa12.45□□□□□ -0.42
SMIM4-201ENST00000307106 KRT82Q9NSB4 513 aa12.45□□□□□ -0.42
SMIM4-201ENST00000307106 OSER1Q9NX31 292 aa12.45□□□□□ -0.42
SMIM4-201ENST00000307106 PCDHB13Q9Y5F0 798 aa12.45□□□□□ -0.42
SMIM4-201ENST00000307106 KIAA0391O15091 583 aaKnown RBP12.44□□□□□ -0.42
SMIM4-201ENST00000307106 AP1G2O75843 785 aa12.44□□□□□ -0.42
SMIM4-201ENST00000307106 STC2O76061 302 aa12.44□□□□□ -0.42
SMIM4-201ENST00000307106 GAP43P17677 238 aa12.44□□□□□ -0.42
SMIM4-201ENST00000307106 PLA2G4AP47712 749 aa12.44□□□□□ -0.42
SMIM4-201ENST00000307106 TMEM215Q68D42 235 aa12.44□□□□□ -0.42
SMIM4-201ENST00000307106 PRICKLE2Q7Z3G6 844 aa12.44□□□□□ -0.42
SMIM4-201ENST00000307106 CBWD2Q8IUF1 395 aa12.44□□□□□ -0.42
SMIM4-201ENST00000307106 DCBLD1Q8N8Z6 715 aa12.44□□□□□ -0.42
SMIM4-201ENST00000307106 ZMIZ2Q8NF64 920 aa12.44□□□□□ -0.42
SMIM4-201ENST00000307106 RFFLQ8WZ73 363 aa12.44□□□□□ -0.42
SMIM4-201ENST00000307106 SKA1Q96BD8 255 aa12.44□□□□□ -0.42
SMIM4-201ENST00000307106 MED8Q96G25 268 aa12.44□□□□□ -0.42
SMIM4-201ENST00000307106 SLC6A18Q96N87 628 aa12.44□□□□□ -0.42
SMIM4-201ENST00000307106 SGK2Q9HBY8 427 aa12.44□□□□□ -0.42
SMIM4-201ENST00000307106 NXF1Q9UBU9 619 aaKnown RBP12.44□□□□□ -0.42
SMIM4-201ENST00000307106 NUDT5Q9UKK9 219 aa12.44□□□□□ -0.42
SMIM4-201ENST00000307106 YKT6O15498 198 aa12.43□□□□□ -0.42
SMIM4-201ENST00000307106 BEST1O76090 585 aa12.43□□□□□ -0.42
SMIM4-201ENST00000307106 DNTTP04053 509 aa12.43□□□□□ -0.42
SMIM4-201ENST00000307106 IGHV4-34P06331 123 aa12.43□□□□□ -0.42
SMIM4-201ENST00000307106 C7P10643 843 aa12.43□□□□□ -0.42
SMIM4-201ENST00000307106 KRT10P13645 584 aa12.43□□□□□ -0.42
SMIM4-201ENST00000307106 TNNI1P19237 187 aa12.43□□□□□ -0.42
SMIM4-201ENST00000307106 EPHA8P29322 1005 aaPredicted RBP12.43□□□□□ -0.42
SMIM4-201ENST00000307106 CHKAP35790 457 aa12.43□□□□□ -0.42
SMIM4-201ENST00000307106 RPS14P62263 151 aaKnown RBP12.43□□□□□ -0.42
SMIM4-201ENST00000307106 INSM1Q01101 510 aaPredicted RBP12.43□□□□□ -0.42
SMIM4-201ENST00000307106 GRIN1Q05586 938 aa12.43□□□□□ -0.42
SMIM4-201ENST00000307106 ALCAMQ13740 583 aa12.43□□□□□ -0.42
SMIM4-201ENST00000307106 KIAA0895LQ68EN5 471 aa12.43□□□□□ -0.42
SMIM4-201ENST00000307106 KLHDC10Q6PID8 442 aa12.43□□□□□ -0.42
SMIM4-201ENST00000307106 KDM7AQ6ZMT4 941 aa12.43□□□□□ -0.42
SMIM4-201ENST00000307106 DHX40Q8IX18 779 aaKnown RBP12.43□□□□□ -0.42
SMIM4-201ENST00000307106 FUKQ8N0W3 1084 aa12.43□□□□□ -0.42
SMIM4-201ENST00000307106 ZNF366Q8N895 744 aa12.43□□□□□ -0.42
SMIM4-201ENST00000307106 HIC2Q96JB3 615 aa12.43□□□□□ -0.42
SMIM4-201ENST00000307106 ZNF578Q96N58 590 aaPredicted RBP12.43□□□□□ -0.42
SMIM4-201ENST00000307106 SMOQ99835 787 aa12.43□□□□□ -0.42
SMIM4-201ENST00000307106 FGFBP2Q9BYJ0 223 aa12.43□□□□□ -0.42
SMIM4-201ENST00000307106 OLFML3Q9NRN5 406 aa12.43□□□□□ -0.42
SMIM4-201ENST00000307106 CLEC4EQ9ULY5 219 aa12.43□□□□□ -0.42
SMIM4-201ENST00000307106 ZNF510Q9Y2H8 683 aa12.43□□□□□ -0.42
SMIM4-201ENST00000307106 A0A1W2PPC4 97 aa12.42□□□□□ -0.42
SMIM4-201ENST00000307106 FAM47DPA6NHR8 397 aa12.42□□□□□ -0.42
SMIM4-201ENST00000307106 CYP26A1O43174 497 aa12.42□□□□□ -0.42
SMIM4-201ENST00000307106 KLK10O43240 276 aa12.42□□□□□ -0.42
SMIM4-201ENST00000307106 TIMM44O43615 452 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms