RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 IFT81Q8WYA0 676 aa18.19■□□□□ 0.5
KRT28-201ENST00000306658 P3H4Q92791 437 aa18.19■□□□□ 0.5
KRT28-201ENST00000306658 CASP10Q92851 521 aa18.19■□□□□ 0.5
KRT28-201ENST00000306658 FAM118BQ9BPY3 351 aa18.19■□□□□ 0.5
KRT28-201ENST00000306658 UBE2OQ9C0C9 1292 aaKnown RBP18.19■□□□□ 0.5
KRT28-201ENST00000306658 OSER1Q9NX31 292 aa18.19■□□□□ 0.5
KRT28-201ENST00000306658 MAGED2Q9UNF1 606 aaPredicted RBP18.19■□□□□ 0.5
KRT28-201ENST00000306658 ZNF148Q9UQR1 794 aa18.19■□□□□ 0.5
KRT28-201ENST00000306658 ESYT3A0FGR9 886 aa18.18■□□□□ 0.5
KRT28-201ENST00000306658 ZSCAN5CA6NGD5 496 aaPredicted RBP18.18■□□□□ 0.5
KRT28-201ENST00000306658 H3BRJ5 948 aa18.18■□□□□ 0.5
KRT28-201ENST00000306658 RARGP13631 454 aa18.18■□□□□ 0.5
KRT28-201ENST00000306658 TGM2P21980 687 aa18.18■□□□□ 0.5
KRT28-201ENST00000306658 CCR1P32246 355 aa18.18■□□□□ 0.5
KRT28-201ENST00000306658 ZNF135P52742 658 aaPredicted RBP18.18■□□□□ 0.5
KRT28-201ENST00000306658 OTUD4Q01804 1114 aaKnown RBP18.18■□□□□ 0.5
KRT28-201ENST00000306658 TAF12Q16514 161 aa18.18■□□□□ 0.5
KRT28-201ENST00000306658 SLC9A4Q6AI14 798 aa18.18■□□□□ 0.5
KRT28-201ENST00000306658 PDZD8Q8NEN9 1154 aa18.18■□□□□ 0.5
KRT28-201ENST00000306658 PCDH19Q8TAB3 1148 aa18.18■□□□□ 0.5
KRT28-201ENST00000306658 ACTL9Q8TC94 416 aa18.18■□□□□ 0.5
KRT28-201ENST00000306658 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.18■□□□□ 0.5
KRT28-201ENST00000306658 OVCA2Q8WZ82 227 aa18.18■□□□□ 0.5
KRT28-201ENST00000306658 SEC14L1Q92503 715 aa18.18■□□□□ 0.5
KRT28-201ENST00000306658 NKD2Q969F2 451 aaPredicted RBP18.18■□□□□ 0.5
KRT28-201ENST00000306658 HAUS1Q96CS2 278 aa18.18■□□□□ 0.5
KRT28-201ENST00000306658 ABHD8Q96I13 439 aa18.18■□□□□ 0.5
KRT28-201ENST00000306658 CSPG4P5Q96PW8 444 aa18.18■□□□□ 0.5
KRT28-201ENST00000306658 TRIM51Q9BSJ1 452 aa18.18■□□□□ 0.5
KRT28-201ENST00000306658 TKTL2Q9H0I9 626 aa18.18■□□□□ 0.5
KRT28-201ENST00000306658 FAM114A2Q9NRY5 505 aa18.18■□□□□ 0.5
KRT28-201ENST00000306658 CWC15Q9P013 229 aaKnown RBP18.18■□□□□ 0.5
KRT28-201ENST00000306658 SFMBT1Q9UHJ3 866 aa18.18■□□□□ 0.5
KRT28-201ENST00000306658 DNPEPQ9ULA0 475 aa18.18■□□□□ 0.5
KRT28-201ENST00000306658 YIPF1Q9Y548 306 aa18.18■□□□□ 0.5
KRT28-201ENST00000306658 LINC01553A4QN01 128 aa18.18■□□□□ 0.5
KRT28-201ENST00000306658 BHMG1C9JSJ3 638 aaPredicted RBP18.18■□□□□ 0.5
KRT28-201ENST00000306658 CNPP09543 421 aaKnown RBP18.18■□□□□ 0.5
KRT28-201ENST00000306658 DRG2P55039 364 aaKnown RBP18.18■□□□□ 0.5
KRT28-201ENST00000306658 VCPP55072 806 aaKnown RBP18.18■□□□□ 0.5
KRT28-201ENST00000306658 DUPD1Q68J44 220 aa18.18■□□□□ 0.5
KRT28-201ENST00000306658 GSTA5Q7RTV2 222 aa18.18■□□□□ 0.5
KRT28-201ENST00000306658 PYROXD2Q8N2H3 581 aa18.18■□□□□ 0.5
KRT28-201ENST00000306658 PQLC3Q8N755 202 aa18.18■□□□□ 0.5
KRT28-201ENST00000306658 PLD5Q8N7P1 536 aa18.18■□□□□ 0.5
KRT28-201ENST00000306658 CASKIN2Q8WXE0 1202 aa18.18■□□□□ 0.5
KRT28-201ENST00000306658 CDK5RAP1Q96SZ6 601 aaKnown RBP18.18■□□□□ 0.5
KRT28-201ENST00000306658 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.18■□□□□ 0.5
KRT28-201ENST00000306658 IRAK3Q9Y616 596 aa18.18■□□□□ 0.5
KRT28-201ENST00000306658 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.17■□□□□ 0.5
KRT28-201ENST00000306658 MCF2LO15068 1137 aa18.17■□□□□ 0.5
KRT28-201ENST00000306658 ITGAVP06756 1048 aa18.17■□□□□ 0.5
KRT28-201ENST00000306658 ADH1AP07327 375 aa18.17■□□□□ 0.5
KRT28-201ENST00000306658 ZDHHC11BP0C7U3 371 aa18.17■□□□□ 0.5
KRT28-201ENST00000306658 SLC2A3P11169 496 aa18.17■□□□□ 0.5
KRT28-201ENST00000306658 CARSP49589 748 aaKnown RBP18.17■□□□□ 0.5
KRT28-201ENST00000306658 EPHB3P54753 998 aa18.17■□□□□ 0.5
KRT28-201ENST00000306658 UBE3AQ05086 875 aa18.17■□□□□ 0.5
KRT28-201ENST00000306658 PPP2R5DQ14738 602 aa18.17■□□□□ 0.5
KRT28-201ENST00000306658 TADA2BQ86TJ2 420 aa18.17■□□□□ 0.5
KRT28-201ENST00000306658 SLC35B2Q8TB61 432 aa18.17■□□□□ 0.5
KRT28-201ENST00000306658 TCF25Q9BQ70 676 aa18.17■□□□□ 0.5
KRT28-201ENST00000306658 EMILIN2Q9BXX0 1053 aa18.17■□□□□ 0.5
KRT28-201ENST00000306658 MAGEB5Q9BZ81 275 aa18.17■□□□□ 0.5
KRT28-201ENST00000306658 ALG13Q9NP73 1137 aaKnown RBP18.17■□□□□ 0.5
KRT28-201ENST00000306658 ENTPD7Q9NQZ7 604 aa18.17■□□□□ 0.5
KRT28-201ENST00000306658 TMPRSS4Q9NRS4 437 aa18.17■□□□□ 0.5
KRT28-201ENST00000306658 ARHGEF38Q9NXL2 777 aa18.17■□□□□ 0.5
KRT28-201ENST00000306658 SAE1Q9UBE0 346 aaPredicted RBP18.17■□□□□ 0.5
KRT28-201ENST00000306658 NUDT5Q9UKK9 219 aa18.17■□□□□ 0.5
KRT28-201ENST00000306658 TLR6Q9Y2C9 796 aa18.17■□□□□ 0.5
KRT28-201ENST00000306658 DAPK3O43293 454 aa18.16■□□□□ 0.5
KRT28-201ENST00000306658 CREB3O43889 395 aa18.16■□□□□ 0.5
KRT28-201ENST00000306658 GOT1P17174 413 aa18.16■□□□□ 0.5
KRT28-201ENST00000306658 HCAR3P49019 387 aa18.16■□□□□ 0.5
KRT28-201ENST00000306658 PLD1Q13393 1074 aa18.16■□□□□ 0.5
KRT28-201ENST00000306658 NNTQ13423 1086 aa18.16■□□□□ 0.5
KRT28-201ENST00000306658 OASLQ15646 514 aaKnown RBP18.16■□□□□ 0.5
KRT28-201ENST00000306658 ZNF276Q8N554 614 aa18.16■□□□□ 0.5
KRT28-201ENST00000306658 TRMT2BQ96GJ1 504 aaKnown RBP18.16■□□□□ 0.5
KRT28-201ENST00000306658 MYRFLQ96LU7 910 aa18.16■□□□□ 0.5
KRT28-201ENST00000306658 ZNF512Q96ME7 567 aaPredicted RBP18.16■□□□□ 0.5
KRT28-201ENST00000306658 TRIM31Q9BZY9 425 aa18.16■□□□□ 0.5
KRT28-201ENST00000306658 DPH5Q9H2P9 285 aa18.16■□□□□ 0.5
KRT28-201ENST00000306658 PLXNA4Q9HCM2 1894 aa18.16■□□□□ 0.5
KRT28-201ENST00000306658 C5orf67F2Z3F1 127 aa18.15■□□□□ 0.5
KRT28-201ENST00000306658 EEF2KO00418 725 aaKnown RBP18.15■□□□□ 0.5
KRT28-201ENST00000306658 RB1P06400 928 aa18.15■□□□□ 0.5
KRT28-201ENST00000306658 PPP3CCP48454 512 aa18.15■□□□□ 0.5
KRT28-201ENST00000306658 NR2C2P49116 596 aa18.15■□□□□ 0.5
KRT28-201ENST00000306658 EIF3EP60228 445 aaKnown RBP18.15■□□□□ 0.5
KRT28-201ENST00000306658 TWF1Q12792 350 aa18.15■□□□□ 0.5
KRT28-201ENST00000306658 EFEMP1Q12805 493 aa18.15■□□□□ 0.5
KRT28-201ENST00000306658 PTK6Q13882 451 aa18.15■□□□□ 0.5
KRT28-201ENST00000306658 HLTFQ14527 1009 aaKnown RBP eCLIP18.15■□□□□ 0.5
KRT28-201ENST00000306658 NOMO1Q15155 1222 aa18.15■□□□□ 0.5
KRT28-201ENST00000306658 C10orf120Q5SQS8 335 aa18.15■□□□□ 0.5
KRT28-201ENST00000306658 C9orf50Q5SZB4 431 aa18.15■□□□□ 0.5
KRT28-201ENST00000306658 BEND6Q5SZJ8 279 aaPredicted RBP18.15■□□□□ 0.5
KRT28-201ENST00000306658 SNX30Q5VWJ9 437 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms