RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 MIPP30301 263 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 GJC1P36383 396 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 TUBP50607 506 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 KCNQ1P51787 676 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 IFI16Q16666 785 aaKnown RBP15.76■□□□□ 0.11
CCDC140-201ENST00000295226 ARHGAP15Q53QZ3 475 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 ZC3H12AQ5D1E8 599 aaKnown RBP15.76■□□□□ 0.11
CCDC140-201ENST00000295226 BNIPLQ7Z465 357 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 SLC35F6Q8N357 371 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 NIPA2Q8N8Q9 360 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 TSC1Q92574 1164 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 FGF13Q92913 245 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 ACSF2Q96CM8 615 aaPredicted RBP15.76■□□□□ 0.11
CCDC140-201ENST00000295226 PEBP4Q96S96 227 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 POMKQ9H5K3 350 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 TASP1Q9H6P5 420 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 PRDM6Q9NQX0 595 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 OLA1Q9NTK5 396 aaKnown RBP15.76■□□□□ 0.11
CCDC140-201ENST00000295226 CCL26Q9Y258 94 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 USP15Q9Y4E8 981 aaPredicted RBP15.76■□□□□ 0.11
CCDC140-201ENST00000295226 CPQQ9Y646 472 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 TRAV19A0A0A6YYK7 116 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 GRXCR2A6NFK2 248 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 IRAK2O43187 625 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 SPOPO43791 374 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 RNF8O76064 485 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 ENDOD1O94919 500 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 RDXP35241 583 aaKnown RBP15.76■□□□□ 0.11
CCDC140-201ENST00000295226 DNA2P51530 1060 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 EIF4EBP2Q13542 120 aaPredicted RBP15.76■□□□□ 0.11
CCDC140-201ENST00000295226 ATP13A4Q4VNC1 1196 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 SLFN11Q7Z7L1 901 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 NPAS3Q8IXF0 933 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 ZNF276Q8N554 614 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 CCDC185Q8N715 623 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 RNF34Q969K3 372 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 ZFRQ96KR1 1074 aaKnown RBP15.76■□□□□ 0.11
CCDC140-201ENST00000295226 WDR24Q96S15 920 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 KLF16Q9BXK1 252 aaPredicted RBP15.76■□□□□ 0.11
CCDC140-201ENST00000295226 ZWILCHQ9H900 591 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 GPATCH2LQ9NWQ4 482 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 COL6A3P12111 3177 aa15.75■□□□□ 0.11
CCDC140-201ENST00000295226 I6L893 689 aaPredicted RBP15.75■□□□□ 0.11
CCDC140-201ENST00000295226 OLFM2O95897 454 aa15.75■□□□□ 0.11
CCDC140-201ENST00000295226 GBP1P32455 592 aa15.75■□□□□ 0.11
CCDC140-201ENST00000295226 TBX4P57082 545 aa15.75■□□□□ 0.11
CCDC140-201ENST00000295226 SMTNL2Q2TAL5 461 aa15.75■□□□□ 0.11
CCDC140-201ENST00000295226 KCNT1Q5JUK3 1230 aa15.75■□□□□ 0.11
CCDC140-201ENST00000295226 C11orf63Q6NUN7 778 aa15.75■□□□□ 0.11
CCDC140-201ENST00000295226 STRADAQ7RTN6 431 aa15.75■□□□□ 0.11
CCDC140-201ENST00000295226 TADA2BQ86TJ2 420 aa15.75■□□□□ 0.11
CCDC140-201ENST00000295226 NT5DC3Q86UY8 548 aa15.75■□□□□ 0.11
CCDC140-201ENST00000295226 CMTM8Q8IZV2 173 aa15.75■□□□□ 0.11
CCDC140-201ENST00000295226 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.75■□□□□ 0.11
CCDC140-201ENST00000295226 ADAMTS19Q8TE59 1207 aa15.75■□□□□ 0.11
CCDC140-201ENST00000295226 UBXN4Q92575 508 aa15.75■□□□□ 0.11
CCDC140-201ENST00000295226 RIPOR3Q96MK2 946 aa15.75■□□□□ 0.11
CCDC140-201ENST00000295226 MYADMQ96S97 322 aa15.75■□□□□ 0.11
CCDC140-201ENST00000295226 CDK5RAP1Q96SZ6 601 aaKnown RBP15.75■□□□□ 0.11
CCDC140-201ENST00000295226 KLHL11Q9NVR0 708 aa15.75■□□□□ 0.11
CCDC140-201ENST00000295226 RRN3Q9NYV6 651 aa15.75■□□□□ 0.11
CCDC140-201ENST00000295226 XPO7Q9UIA9 1087 aaKnown RBP15.75■□□□□ 0.11
CCDC140-201ENST00000295226 USP18Q9UMW8 372 aa15.75■□□□□ 0.11
CCDC140-201ENST00000295226 SNX10Q9Y5X0 201 aa15.75■□□□□ 0.11
CCDC140-201ENST00000295226 MRFAP1Q9Y605 127 aa15.75■□□□□ 0.11
CCDC140-201ENST00000295226 CTAGE9A4FU28 777 aa15.74■□□□□ 0.11
CCDC140-201ENST00000295226 ENC1O14682 589 aa15.74■□□□□ 0.11
CCDC140-201ENST00000295226 PRAMEF12O95522 483 aa15.74■□□□□ 0.11
CCDC140-201ENST00000295226 MOCS2O96007 188 aaPredicted RBP15.74■□□□□ 0.11
CCDC140-201ENST00000295226 MAN1A1P33908 653 aa15.74■□□□□ 0.11
CCDC140-201ENST00000295226 AVPR1AP37288 418 aa15.74■□□□□ 0.11
CCDC140-201ENST00000295226 MARCKSL1P49006 195 aa15.74■□□□□ 0.11
CCDC140-201ENST00000295226 CXCR3P49682 368 aa15.74■□□□□ 0.11
CCDC140-201ENST00000295226 TRIP4Q15650 581 aaPredicted RBP15.74■□□□□ 0.11
CCDC140-201ENST00000295226 KLHDC10Q6PID8 442 aa15.74■□□□□ 0.11
CCDC140-201ENST00000295226 CYP4V2Q6ZWL3 525 aaPredicted RBP15.74■□□□□ 0.11
CCDC140-201ENST00000295226 PEX26Q7Z412 305 aa15.74■□□□□ 0.11
CCDC140-201ENST00000295226 ARID3BQ8IVW6 561 aaPredicted RBP15.74■□□□□ 0.11
CCDC140-201ENST00000295226 RIN3Q8TB24 985 aa15.74■□□□□ 0.11
CCDC140-201ENST00000295226 ZSCAN18Q8TBC5 510 aaPredicted RBP15.74■□□□□ 0.11
CCDC140-201ENST00000295226 KRT35Q92764 455 aa15.74■□□□□ 0.11
CCDC140-201ENST00000295226 USP13Q92995 863 aaPredicted RBP15.74■□□□□ 0.11
CCDC140-201ENST00000295226 HLA-CQ95604 372 aa15.74■□□□□ 0.11
CCDC140-201ENST00000295226 PGAP3Q96FM1 320 aaPredicted RBP15.74■□□□□ 0.11
CCDC140-201ENST00000295226 FCRL2Q96LA5 508 aaPredicted RBP15.74■□□□□ 0.11
CCDC140-201ENST00000295226 SERPINB11Q96P15 392 aa15.74■□□□□ 0.11
CCDC140-201ENST00000295226 WDCPQ9H6R7 721 aa15.74■□□□□ 0.11
CCDC140-201ENST00000295226 TLR6Q9Y2C9 796 aa15.74■□□□□ 0.11
CCDC140-201ENST00000295226 DOCK8Q8NF50 2099 aa15.73■□□□□ 0.11
CCDC140-201ENST00000295226 FANCGO15287 622 aa15.73■□□□□ 0.11
CCDC140-201ENST00000295226 STC2O76061 302 aa15.73■□□□□ 0.11
CCDC140-201ENST00000295226 F9P00740 461 aa15.73■□□□□ 0.11
CCDC140-201ENST00000295226 GGCXP38435 758 aa15.73■□□□□ 0.11
CCDC140-201ENST00000295226 MTHFRP42898 656 aa15.73■□□□□ 0.11
CCDC140-201ENST00000295226 SLC7A9P82251 487 aa15.73■□□□□ 0.11
CCDC140-201ENST00000295226 SLC25A11Q02978 314 aaKnown RBP15.73■□□□□ 0.11
CCDC140-201ENST00000295226 TFF2Q03403 129 aa15.73■□□□□ 0.11
CCDC140-201ENST00000295226 ACAP1Q15027 740 aa15.73■□□□□ 0.11
CCDC140-201ENST00000295226 TRIM58Q8NG06 486 aa15.73■□□□□ 0.11
CCDC140-201ENST00000295226 SUSD6Q92537 303 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms