RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 PBKQ96KB5 322 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 KCNK9Q9NPC2 374 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 HYOU1Q9Y4L1 999 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 ALG6Q9Y672 507 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 MYH10P35580 1976 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 DDX3YO15523 660 aaKnown RBP8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 CDC25CP30307 473 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 HTR7P34969 479 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 SLC12A2P55011 1212 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 KRT81Q14533 505 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 HADHQ16836 314 aaKnown RBP8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 RHOT1Q8IXI2 618 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 CCNYQ8ND76 341 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 RXFP2Q8WXD0 754 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 SFXN1Q9H9B4 322 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 MAN1C1Q9NR34 630 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 TTC7AQ9ULT0 858 aaPredicted RBP8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 SLC27A5Q9Y2P5 690 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 MDM4O15151 490 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 KRT7P08729 469 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 PDGFRAP16234 1089 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 RECQLP46063 649 aaPredicted RBP8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 COPS2P61201 443 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 RPL7AP62424 266 aaKnown RBP8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 OGDHQ02218 1023 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 SLC25A11Q02978 314 aaKnown RBP8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 SCAPQ12770 1279 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 PRPF38BQ5VTL8 546 aaKnown RBP8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 SCD5Q86SK9 330 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 DNAAF5Q86Y56 855 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 YAF2Q8IY57 180 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 CLEC4CQ8WTT0 213 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 PIWIL1Q96J94 861 aaKnown RBP8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 SERPINB11Q96P15 392 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 KIF26AQ9ULI4 1882 aaPredicted RBP8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 PRR23AA6NEV1 266 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 YJEFN3A6XGL0 299 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 E7ENQ6 273 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 CLGNO14967 610 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 C8AP07357 584 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 TCP1P17987 556 aaKnown RBP8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 COMTP21964 271 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 SULT1E1P49888 294 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 KRT33BQ14525 404 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 MAP9Q49MG5 647 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 BRMS1LQ5PSV4 323 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 SEL1L2Q5TEA6 688 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 OTUD1Q5VV17 481 aaPredicted RBP8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 BTBD8Q5XKL5 378 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 KAZNQ674X7 775 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 CC2D1AQ6P1N0 951 aaPredicted RBP8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 TMC8Q8IU68 726 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 EFHBQ8N7U6 833 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 ARNTL2Q8WYA1 636 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 LRRC3Q9BY71 257 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 EPOPA6NHQ4 379 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 AGRPO00253 132 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 RNF8O76064 485 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 LATS1O95835 1130 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 FYNP06241 537 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 IRS1P35568 1242 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 FLT3P36888 993 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 USP46P62068 366 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 AMPD2Q01433 879 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 NRG1Q02297 640 aaPredicted RBP8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 FOXD4Q12950 439 aaPredicted RBP8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 MAP7D1Q3KQU3 841 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 TRNP1Q6NT89 227 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 ZNF572Q7Z3I7 529 aaPredicted RBP8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 DEFB106AQ8N104 65 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 SLC7A14Q8TBB6 771 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 GDPD5Q8WTR4 605 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 WDR24Q96S15 920 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 CARD9Q9H257 536 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 RETREG1Q9H6L5 497 aa8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 HBS1LQ9Y450 684 aaKnown RBP8.76□□□□□ -1.01
PTPDC1-201ENST00000288976 A0A1W2PQH9 124 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 OLFM2O95897 454 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 SLC2A3P11169 496 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 TCF3P15923 654 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 RING1Q06587 406 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 MESDQ14696 234 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 RPS6KA1Q15418 735 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 SCAMP5Q8TAC9 235 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 ALKBH8Q96BT7 664 aaKnown RBP8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 SPON2Q9BUD6 331 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 IRX2Q9BZI1 471 aaPredicted RBP8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 ARHGEF38Q9NXL2 777 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 TRPM5Q9NZQ8 1165 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 GMIPQ9P107 970 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 RCOR3Q9P2K3 495 aaPredicted RBP8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 SNX12Q9UMY4 172 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 TLR6Q9Y2C9 796 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 LRCH4O75427 683 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 TRUB2O95900 331 aaKnown RBP8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 C2CD6Q53TS8 623 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 CFAP157Q5JU67 520 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 SYT10Q6XYQ8 523 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 RASGEF1CQ8N431 466 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms