RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 PTPRAP18433 802 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 TPSB2P20231 275 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 GRIA2P42262 883 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 BASP1P80723 227 aaKnown RBP10.73□□□□□ -0.69
SKA1-201ENST00000285116 TPSAB1Q15661 275 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 SMTNL2Q2TAL5 461 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 HSF5Q4G112 596 aaPredicted RBP10.73□□□□□ -0.69
SKA1-201ENST00000285116 FBXO27Q8NI29 283 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 CXorf38Q8TB03 319 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 PRPF31Q8WWY3 499 aaKnown RBP10.73□□□□□ -0.69
SKA1-201ENST00000285116 TTC17Q96AE7 1141 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 RNF157Q96PX1 679 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 KLF6Q99612 283 aaPredicted RBP10.73□□□□□ -0.69
SKA1-201ENST00000285116 FZD8Q9H461 694 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 PLAC1Q9HBJ0 212 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 PPARGC1AQ9UBK2 798 aaKnown RBP10.73□□□□□ -0.69
SKA1-201ENST00000285116 GTF2IRD1Q9UHL9 959 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 VCANP13611 3396 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 C2CD4BA6NLJ0 364 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 TTLL13PA6NNM8 815 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 AP1G1O43747 822 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 CILPO75339 1184 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 CAPN15O75808 1086 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 VDRP11473 427 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 UBA1P22314 1058 aaKnown RBP10.72□□□□□ -0.69
SKA1-201ENST00000285116 MRPS5P82675 430 aaKnown RBP10.72□□□□□ -0.69
SKA1-201ENST00000285116 PTPN11Q06124 597 aaPredicted RBP10.72□□□□□ -0.69
SKA1-201ENST00000285116 INCA1Q0VD86 236 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 SFSWAPQ12872 951 aaKnown RBP10.72□□□□□ -0.69
SKA1-201ENST00000285116 KLC3Q6P597 504 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 SATL1Q86VE3 508 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 ACMSDQ8TDX5 336 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 IRGQQ8WZA9 623 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 CLMNQ96JQ2 1002 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 CLPTM1LQ96KA5 538 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 PEBP4Q96S96 227 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 CCDC106Q9BWC9 280 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 KLHL4Q9C0H6 718 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 ACKR2O00590 384 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 HNRNPRO43390 633 aaKnown RBP10.72□□□□□ -0.69
SKA1-201ENST00000285116 KRT38O76015 456 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 APOEP02649 317 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 SERPINA6P08185 405 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 VCLP18206 1134 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 AOC1P19801 751 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 GPD1P21695 349 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 TPP2P29144 1249 aaPredicted RBP10.72□□□□□ -0.69
SKA1-201ENST00000285116 GPD2P43304 727 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 POU5F1BQ06416 359 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 LAMTOR4Q0VGL1 99 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 NAB1Q13506 487 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 BOLA3Q53S33 107 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 ZNF667Q5HYK9 610 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 KCNT1Q5JUK3 1230 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 DARS2Q6PI48 645 aaKnown RBP10.72□□□□□ -0.69
SKA1-201ENST00000285116 CAND1Q86VP6 1230 aaKnown RBP10.72□□□□□ -0.69
SKA1-201ENST00000285116 MAP7D3Q8IWC1 876 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 NMD3Q96D46 503 aaKnown RBP10.72□□□□□ -0.69
SKA1-201ENST00000285116 NMRK2Q9NPI5 230 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 HOXC10Q9NYD6 342 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 PCDH10Q9P2E7 1040 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 HSFX1Q9UBD0 423 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 SIX4Q9UIU6 781 aa10.72□□□□□ -0.69
SKA1-201ENST00000285116 TRIM49D1C9J1S8 452 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 MICAL2O94851 1124 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 OSBPP22059 807 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 STAT5BP51692 787 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 CHN2P52757 468 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 DEUP1Q05D60 604 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 KDSRQ06136 332 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 STILQ15468 1287 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 NOL9Q5SY16 702 aaKnown RBP10.71□□□□□ -0.69
SKA1-201ENST00000285116 STEAP4Q687X5 459 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 B3GNT6Q6ZMB0 384 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 E2F7Q96AV8 911 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 PPP1R14BQ96C90 147 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 TMEM176AQ96HP8 235 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 CATSPER2Q96P56 530 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 GCOM2Q9BZD3 368 aaPredicted RBP10.71□□□□□ -0.69
SKA1-201ENST00000285116 IQCGQ9H095 443 aaKnown RBP10.71□□□□□ -0.69
SKA1-201ENST00000285116 KLC2Q9H0B6 622 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 SUDS3Q9H7L9 328 aaPredicted RBP10.71□□□□□ -0.69
SKA1-201ENST00000285116 PRDM16Q9HAZ2 1276 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 CLIC5Q9NZA1 410 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 TNFSF13BQ9Y275 285 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 ZNF510Q9Y2H8 683 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 MDM4O15151 490 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 GCATO75600 419 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 BPGMP07738 259 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 YWHAGP61981 247 aaKnown RBP eCLIP10.71□□□□□ -0.69
SKA1-201ENST00000285116 HPCAP84074 193 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 BST1Q10588 318 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 HIC1Q14526 733 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 KYAT1Q16773 422 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 FAM187BQ17R55 369 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 SEZ6Q53EL9 994 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 SFT2D3Q587I9 215 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 SH3D19Q5HYK7 790 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 EFHC1Q5JVL4 640 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 METTL7BQ6UX53 244 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms