RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 FSHRP23945 695 aa22.68■■□□□ 1.22
PDLIM3-203ENST00000284771 MARCKSL1P49006 195 aa22.68■■□□□ 1.22
PDLIM3-203ENST00000284771 KCNQ1P51787 676 aa22.68■■□□□ 1.22
PDLIM3-203ENST00000284771 ZC3H12AQ5D1E8 599 aaKnown RBP22.68■■□□□ 1.22
PDLIM3-203ENST00000284771 MEI1Q5TIA1 1274 aa22.68■■□□□ 1.22
PDLIM3-203ENST00000284771 SCYL2Q6P3W7 929 aa22.68■■□□□ 1.22
PDLIM3-203ENST00000284771 PEX26Q7Z412 305 aa22.68■■□□□ 1.22
PDLIM3-203ENST00000284771 TADA2BQ86TJ2 420 aa22.68■■□□□ 1.22
PDLIM3-203ENST00000284771 CMTM8Q8IZV2 173 aa22.68■■□□□ 1.22
PDLIM3-203ENST00000284771 CCDC185Q8N715 623 aa22.68■■□□□ 1.22
PDLIM3-203ENST00000284771 ADAMTS19Q8TE59 1207 aa22.68■■□□□ 1.22
PDLIM3-203ENST00000284771 FCRL2Q96LA5 508 aaPredicted RBP22.68■■□□□ 1.22
PDLIM3-203ENST00000284771 NACA2Q9H009 215 aa22.68■■□□□ 1.22
PDLIM3-203ENST00000284771 SMG9Q9H0W8 520 aaKnown RBP22.68■■□□□ 1.22
PDLIM3-203ENST00000284771 SMPD4Q9NXE4 827 aa22.68■■□□□ 1.22
PDLIM3-203ENST00000284771 TLR6Q9Y2C9 796 aa22.68■■□□□ 1.22
PDLIM3-203ENST00000284771 ENC1O14682 589 aa22.68■■□□□ 1.22
PDLIM3-203ENST00000284771 IGLV3-27P01718 113 aa22.68■■□□□ 1.22
PDLIM3-203ENST00000284771 MBL2P11226 248 aaPredicted RBP22.68■■□□□ 1.22
PDLIM3-203ENST00000284771 GBP1P32455 592 aa22.68■■□□□ 1.22
PDLIM3-203ENST00000284771 KCNT1Q5JUK3 1230 aa22.68■■□□□ 1.22
PDLIM3-203ENST00000284771 NPAS3Q8IXF0 933 aa22.68■■□□□ 1.22
PDLIM3-203ENST00000284771 KRT35Q92764 455 aa22.68■■□□□ 1.22
PDLIM3-203ENST00000284771 FGF13Q92913 245 aa22.68■■□□□ 1.22
PDLIM3-203ENST00000284771 TLR10Q9BXR5 811 aa22.68■■□□□ 1.22
PDLIM3-203ENST00000284771 TRAV19A0A0A6YYK7 116 aa22.67■■□□□ 1.22
PDLIM3-203ENST00000284771 CKMP06732 381 aa22.67■■□□□ 1.22
PDLIM3-203ENST00000284771 HMBSP08397 361 aa22.67■■□□□ 1.22
PDLIM3-203ENST00000284771 TNNT1P13805 278 aa22.67■■□□□ 1.22
PDLIM3-203ENST00000284771 KCNA5P22460 613 aa22.67■■□□□ 1.22
PDLIM3-203ENST00000284771 DDX6P26196 483 aaKnown RBP eCLIP22.67■■□□□ 1.22
PDLIM3-203ENST00000284771 TBX4P57082 545 aa22.67■■□□□ 1.22
PDLIM3-203ENST00000284771 ETF1P62495 437 aaKnown RBP22.67■■□□□ 1.22
PDLIM3-203ENST00000284771 SLC7A9P82251 487 aa22.67■■□□□ 1.22
PDLIM3-203ENST00000284771 NNTQ13423 1086 aa22.67■■□□□ 1.22
PDLIM3-203ENST00000284771 TRIP4Q15650 581 aaPredicted RBP22.67■■□□□ 1.22
PDLIM3-203ENST00000284771 ARHGAP15Q53QZ3 475 aa22.67■■□□□ 1.22
PDLIM3-203ENST00000284771 SUSD6Q92537 303 aa22.67■■□□□ 1.22
PDLIM3-203ENST00000284771 HES6Q96HZ4 224 aa22.67■■□□□ 1.22
PDLIM3-203ENST00000284771 POMKQ9H5K3 350 aa22.67■■□□□ 1.22
PDLIM3-203ENST00000284771 WDCPQ9H6R7 721 aa22.67■■□□□ 1.22
PDLIM3-203ENST00000284771 UBE2ZQ9H832 354 aaPredicted RBP22.67■■□□□ 1.22
PDLIM3-203ENST00000284771 AMFRQ9UKV5 643 aa22.67■■□□□ 1.22
PDLIM3-203ENST00000284771 CCL26Q9Y258 94 aa22.67■■□□□ 1.22
PDLIM3-203ENST00000284771 CPQQ9Y646 472 aa22.67■■□□□ 1.22
PDLIM3-203ENST00000284771 KCNU1A8MYU2 1149 aa22.66■■□□□ 1.22
PDLIM3-203ENST00000284771 PFKLP17858 780 aa22.66■■□□□ 1.22
PDLIM3-203ENST00000284771 SSR1P43307 286 aaKnown RBP22.66■■□□□ 1.22
PDLIM3-203ENST00000284771 SKIV2LQ15477 1246 aaKnown RBP22.66■■□□□ 1.22
PDLIM3-203ENST00000284771 SMTNL2Q2TAL5 461 aa22.66■■□□□ 1.22
PDLIM3-203ENST00000284771 GET4Q7L5D6 327 aaPredicted RBP22.66■■□□□ 1.22
PDLIM3-203ENST00000284771 ACSF2Q96CM8 615 aaPredicted RBP22.66■■□□□ 1.22
PDLIM3-203ENST00000284771 SLITRK6Q9H5Y7 841 aa22.66■■□□□ 1.22
PDLIM3-203ENST00000284771 ZWILCHQ9H900 591 aa22.66■■□□□ 1.22
PDLIM3-203ENST00000284771 XPO7Q9UIA9 1087 aaKnown RBP22.66■■□□□ 1.22
PDLIM3-203ENST00000284771 CD207Q9UJ71 328 aa22.66■■□□□ 1.22
PDLIM3-203ENST00000284771 SOBPA7XYQ1 873 aa22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 DDX3YO15523 660 aaKnown RBP22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 GREM1O60565 184 aa22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 KLKB1P03952 638 aa22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 RARAP10276 462 aa22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 CTNNA1P35221 906 aaKnown RBP22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 PEX5P50542 639 aa22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 COG7P83436 770 aa22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 RIN3Q8TB24 985 aa22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 ALG3Q92685 438 aa22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 USP13Q92995 863 aaPredicted RBP22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 TKTL2Q9H0I9 626 aa22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 ARHGEF38Q9NXL2 777 aa22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 HBS1LQ9Y450 684 aaKnown RBP22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 JRKLQ9Y4A0 524 aa22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 USP15Q9Y4E8 981 aaPredicted RBP22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 GRXCR2A6NFK2 248 aa22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 PRPSAP2O60256 369 aa22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 ZNF500O60304 480 aaPredicted RBP22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 STC2O76061 302 aa22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 PRAMEF12O95522 483 aa22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 ATP1A1P05023 1023 aaKnown RBP22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 CCR1P32246 355 aa22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 ADRA1BP35368 520 aa22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 RING1Q06587 406 aa22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 PPP2R5DQ14738 602 aa22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 CA9Q16790 459 aa22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 SYT10Q6XYQ8 523 aa22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 DENND4AQ7Z401 1863 aa22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 ARID3BQ8IVW6 561 aaPredicted RBP22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 RHOT1Q8IXI2 618 aa22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 RIPOR3Q96MK2 946 aa22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 SNRNP25Q9BV90 132 aaKnown RBP22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 GPATCH2LQ9NWQ4 482 aa22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 PCDHA3Q9Y5H8 950 aa22.65■■□□□ 1.22
PDLIM3-203ENST00000284771 DESP17661 470 aa22.64■■□□□ 1.21
PDLIM3-203ENST00000284771 GJC1P36383 396 aa22.64■■□□□ 1.21
PDLIM3-203ENST00000284771 AVPR1AP37288 418 aa22.64■■□□□ 1.21
PDLIM3-203ENST00000284771 ERMARDQ5T6L9 678 aa22.64■■□□□ 1.21
PDLIM3-203ENST00000284771 LRRC38Q5VT99 294 aa22.64■■□□□ 1.21
PDLIM3-203ENST00000284771 SND1Q7KZF4 910 aaKnown RBP eCLIP22.64■■□□□ 1.21
PDLIM3-203ENST00000284771 ZSCAN18Q8TBC5 510 aaPredicted RBP22.64■■□□□ 1.21
PDLIM3-203ENST00000284771 RNF34Q969K3 372 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms