RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 SLC10A2Q12908 348 aaPredicted RBP22.88■■□□□ 1.25
CCDC7-201ENST00000277657 XRCC4Q13426 336 aa22.88■■□□□ 1.25
CCDC7-201ENST00000277657 DDR2Q16832 855 aa22.88■■□□□ 1.25
CCDC7-201ENST00000277657 TTMPQ5BVD1 217 aa22.88■■□□□ 1.25
CCDC7-201ENST00000277657 CEP85LQ5SZL2 805 aa22.88■■□□□ 1.25
CCDC7-201ENST00000277657 NUP93Q8N1F7 819 aa22.88■■□□□ 1.25
CCDC7-201ENST00000277657 ATAD1Q8NBU5 361 aa22.88■■□□□ 1.25
CCDC7-201ENST00000277657 TOP1MTQ969P6 601 aa22.88■■□□□ 1.25
CCDC7-201ENST00000277657 ETNK2Q9NVF9 386 aa22.88■■□□□ 1.25
CCDC7-201ENST00000277657 IL37Q9NZH6 218 aa22.88■■□□□ 1.25
CCDC7-201ENST00000277657 SHOC2Q9UQ13 582 aa22.88■■□□□ 1.25
CCDC7-201ENST00000277657 SCML2Q9UQR0 700 aa22.88■■□□□ 1.25
CCDC7-201ENST00000277657 FARP1Q9Y4F1 1045 aaPredicted RBP22.88■■□□□ 1.25
CCDC7-201ENST00000277657 PLXNA3P51805 1871 aa22.87■■□□□ 1.25
CCDC7-201ENST00000277657 RIPK2O43353 540 aa22.87■■□□□ 1.25
CCDC7-201ENST00000277657 AMHP03971 560 aa22.87■■□□□ 1.25
CCDC7-201ENST00000277657 ITGB8P26012 769 aa22.87■■□□□ 1.25
CCDC7-201ENST00000277657 GPR15P49685 360 aa22.87■■□□□ 1.25
CCDC7-201ENST00000277657 ARL13BQ3SXY8 428 aa22.87■■□□□ 1.25
CCDC7-201ENST00000277657 DENND2CQ68D51 928 aa22.87■■□□□ 1.25
CCDC7-201ENST00000277657 PCGF5Q86SE9 256 aa22.87■■□□□ 1.25
CCDC7-201ENST00000277657 RNF168Q8IYW5 571 aaPredicted RBP22.87■■□□□ 1.25
CCDC7-201ENST00000277657 MKI67P46013 3256 aaKnown RBP22.87■■□□□ 1.25
CCDC7-201ENST00000277657 MYO16Q9Y6X6 1858 aa22.87■■□□□ 1.25
CCDC7-201ENST00000277657 PGFP49763 221 aa22.86■■□□□ 1.25
CCDC7-201ENST00000277657 DPYSQ14117 519 aa22.86■■□□□ 1.25
CCDC7-201ENST00000277657 SLC29A2Q14542 456 aa22.86■■□□□ 1.25
CCDC7-201ENST00000277657 TTC9BQ8N6N2 239 aa22.86■■□□□ 1.25
CCDC7-201ENST00000277657 SPPL2BQ8TCT7 592 aa22.86■■□□□ 1.25
CCDC7-201ENST00000277657 ZNF689Q96CS4 500 aaPredicted RBP22.86■■□□□ 1.25
CCDC7-201ENST00000277657 PWWP2AQ96N64 755 aa22.86■■□□□ 1.25
CCDC7-201ENST00000277657 CDC42EP4Q9H3Q1 356 aaKnown RBP22.86■■□□□ 1.25
CCDC7-201ENST00000277657 FBXO44Q9H4M3 255 aa22.86■■□□□ 1.25
CCDC7-201ENST00000277657 WDCPQ9H6R7 721 aa22.86■■□□□ 1.25
CCDC7-201ENST00000277657 DTLQ9NZJ0 730 aa22.86■■□□□ 1.25
CCDC7-201ENST00000277657 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.85■■□□□ 1.25
CCDC7-201ENST00000277657 MTMR11A4FU01 709 aa22.85■■□□□ 1.25
CCDC7-201ENST00000277657 TRIM43BA6NCK2 446 aa22.85■■□□□ 1.25
CCDC7-201ENST00000277657 KIAA0355O15063 1070 aa22.85■■□□□ 1.25
CCDC7-201ENST00000277657 VNN2O95498 520 aa22.85■■□□□ 1.25
CCDC7-201ENST00000277657 CPB1P15086 417 aa22.85■■□□□ 1.25
CCDC7-201ENST00000277657 HCAR3P49019 387 aa22.85■■□□□ 1.25
CCDC7-201ENST00000277657 CTCFP49711 727 aaPredicted RBP22.85■■□□□ 1.25
CCDC7-201ENST00000277657 GABPB1Q06547 395 aaPredicted RBP22.85■■□□□ 1.25
CCDC7-201ENST00000277657 IFRD2Q12894 506 aaPredicted RBP22.85■■□□□ 1.25
CCDC7-201ENST00000277657 UBAP2Q5T6F2 1119 aaKnown RBP22.85■■□□□ 1.25
CCDC7-201ENST00000277657 SDHAF4Q5VUM1 108 aa22.85■■□□□ 1.25
CCDC7-201ENST00000277657 BTBD8Q5XKL5 378 aa22.85■■□□□ 1.25
CCDC7-201ENST00000277657 CEP128Q6ZU80 1094 aa22.85■■□□□ 1.25
CCDC7-201ENST00000277657 B4GALNT4Q76KP1 1039 aa22.85■■□□□ 1.25
CCDC7-201ENST00000277657 PRCCQ92733 491 aaPredicted RBP22.85■■□□□ 1.25
CCDC7-201ENST00000277657 TRIM43Q96BQ3 446 aaPredicted RBP22.85■■□□□ 1.25
CCDC7-201ENST00000277657 PKNOX2Q96KN3 472 aa22.85■■□□□ 1.25
CCDC7-201ENST00000277657 OLFM3Q96PB7 478 aa22.85■■□□□ 1.25
CCDC7-201ENST00000277657 SMOC2Q9H3U7 446 aa22.85■■□□□ 1.25
CCDC7-201ENST00000277657 NMUR1Q9HB89 426 aa22.85■■□□□ 1.25
CCDC7-201ENST00000277657 TMBIM4Q9HC24 238 aa22.85■■□□□ 1.25
CCDC7-201ENST00000277657 KIAA0100Q14667 2235 aaKnown RBP22.85■■□□□ 1.25
CCDC7-201ENST00000277657 ZNF638Q14966 1978 aaKnown RBP22.85■■□□□ 1.25
CCDC7-201ENST00000277657 FAM92AA1XBS5 289 aa22.85■■□□□ 1.25
CCDC7-201ENST00000277657 FAM72CH0Y354 149 aa22.85■■□□□ 1.25
CCDC7-201ENST00000277657 FAM72AQ5TYM5 149 aa22.85■■□□□ 1.25
CCDC7-201ENST00000277657 FAM72DQ6L9T8 149 aa22.85■■□□□ 1.25
CCDC7-201ENST00000277657 RFX8Q6ZV50 586 aa22.85■■□□□ 1.25
CCDC7-201ENST00000277657 MON1AQ86VX9 555 aa22.85■■□□□ 1.25
CCDC7-201ENST00000277657 FAM72BQ86X60 149 aa22.85■■□□□ 1.25
CCDC7-201ENST00000277657 CDKL3Q8IVW4 592 aaPredicted RBP22.85■■□□□ 1.25
CCDC7-201ENST00000277657 C2orf15Q8WU43 125 aaKnown RBP22.85■■□□□ 1.25
CCDC7-201ENST00000277657 CPT1BQ92523 772 aa22.85■■□□□ 1.25
CCDC7-201ENST00000277657 IGSF21Q96ID5 467 aa22.85■■□□□ 1.25
CCDC7-201ENST00000277657 VN1R3Q9BXE9 311 aa22.85■■□□□ 1.25
CCDC7-201ENST00000277657 RC3H2Q9HBD1 1191 aaKnown RBP22.85■■□□□ 1.25
CCDC7-201ENST00000277657 MFHAS1Q9Y4C4 1052 aa22.85■■□□□ 1.25
CCDC7-201ENST00000277657 GOLGA6CA6NDK9 693 aa22.84■■□□□ 1.25
CCDC7-201ENST00000277657 EEF2KO00418 725 aaKnown RBP22.84■■□□□ 1.25
CCDC7-201ENST00000277657 IRAK2O43187 625 aa22.84■■□□□ 1.25
CCDC7-201ENST00000277657 CREB3O43889 395 aa22.84■■□□□ 1.25
CCDC7-201ENST00000277657 MAP3K6O95382 1288 aa22.84■■□□□ 1.25
CCDC7-201ENST00000277657 GOLGA6DP0CG33 693 aa22.84■■□□□ 1.25
CCDC7-201ENST00000277657 RBL1P28749 1068 aa22.84■■□□□ 1.25
CCDC7-201ENST00000277657 ZNF135P52742 658 aaPredicted RBP22.84■■□□□ 1.25
CCDC7-201ENST00000277657 GYS2P54840 703 aa22.84■■□□□ 1.25
CCDC7-201ENST00000277657 ARPP19P56211 112 aa22.84■■□□□ 1.25
CCDC7-201ENST00000277657 SLC45A4Q5BKX6 768 aa22.84■■□□□ 1.25
CCDC7-201ENST00000277657 RNF19BQ6ZMZ0 732 aa22.84■■□□□ 1.25
CCDC7-201ENST00000277657 HOOK3Q86VS8 718 aa22.84■■□□□ 1.25
CCDC7-201ENST00000277657 PPIL6Q8IXY8 311 aa22.84■■□□□ 1.25
CCDC7-201ENST00000277657 TKTL2Q9H0I9 626 aa22.84■■□□□ 1.25
CCDC7-201ENST00000277657 GOLGA6AQ9NYA3 693 aa22.84■■□□□ 1.25
CCDC7-201ENST00000277657 A0A1W2PQH9 124 aa22.83■■□□□ 1.25
CCDC7-201ENST00000277657 DCLK1O15075 740 aa22.83■■□□□ 1.25
CCDC7-201ENST00000277657 KCNN4O15554 427 aa22.83■■□□□ 1.25
CCDC7-201ENST00000277657 SHBGP04278 402 aa22.83■■□□□ 1.25
CCDC7-201ENST00000277657 MYZAPP0CAP1 466 aa22.83■■□□□ 1.25
CCDC7-201ENST00000277657 CSF2RAP15509 400 aa22.83■■□□□ 1.25
CCDC7-201ENST00000277657 NRLP54845 237 aa22.83■■□□□ 1.25
CCDC7-201ENST00000277657 USP46P62068 366 aa22.83■■□□□ 1.25
CCDC7-201ENST00000277657 PAFAH1B3Q15102 231 aaKnown RBP22.83■■□□□ 1.25
CCDC7-201ENST00000277657 USP41Q3LFD5 358 aa22.83■■□□□ 1.25
CCDC7-201ENST00000277657 KCNT2Q6UVM3 1135 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms