RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 XYLT1Q86Y38 959 aa9.06□□□□□ -0.96
TRIM43-201ENST00000272395 PDIK1LQ8N165 341 aa9.06□□□□□ -0.96
TRIM43-201ENST00000272395 SLC4A11Q8NBS3 891 aa9.06□□□□□ -0.96
TRIM43-201ENST00000272395 GIMAP7Q8NHV1 300 aa9.06□□□□□ -0.96
TRIM43-201ENST00000272395 CPT1BQ92523 772 aa9.06□□□□□ -0.96
TRIM43-201ENST00000272395 INPP5DQ92835 1189 aa9.06□□□□□ -0.96
TRIM43-201ENST00000272395 MCRS1Q96EZ8 462 aa9.06□□□□□ -0.96
TRIM43-201ENST00000272395 RMDN2Q96LZ7 410 aa9.06□□□□□ -0.96
TRIM43-201ENST00000272395 FAM161BQ96MY7 647 aa9.06□□□□□ -0.96
TRIM43-201ENST00000272395 ANKRD27Q96NW4 1050 aa9.06□□□□□ -0.96
TRIM43-201ENST00000272395 TMEM237Q96Q45 408 aa9.06□□□□□ -0.96
TRIM43-201ENST00000272395 LRRC37BQ96QE4 947 aa9.06□□□□□ -0.96
TRIM43-201ENST00000272395 VPS11Q9H270 941 aa9.06□□□□□ -0.96
TRIM43-201ENST00000272395 LRMDAQ9H2I8 198 aa9.06□□□□□ -0.96
TRIM43-201ENST00000272395 SYNCQ9H7C4 482 aa9.06□□□□□ -0.96
TRIM43-201ENST00000272395 NRDE2Q9H7Z3 1164 aa9.06□□□□□ -0.96
TRIM43-201ENST00000272395 EBF2Q9HAK2 575 aa9.06□□□□□ -0.96
TRIM43-201ENST00000272395 SLC28A3Q9HAS3 691 aa9.06□□□□□ -0.96
TRIM43-201ENST00000272395 GOLGA2P5Q9HBQ8 144 aa9.06□□□□□ -0.96
TRIM43-201ENST00000272395 ASNSD1Q9NWL6 643 aa9.06□□□□□ -0.96
TRIM43-201ENST00000272395 TUBGCP4Q9UGJ1 667 aa9.06□□□□□ -0.96
TRIM43-201ENST00000272395 RPL26L1Q9UNX3 145 aaKnown RBP9.06□□□□□ -0.96
TRIM43-201ENST00000272395 CLUHO75153 1309 aa9.05□□□□□ -0.96
TRIM43-201ENST00000272395 CASTOR2A6NHX0 329 aa9.05□□□□□ -0.96
TRIM43-201ENST00000272395 NT5C1B-RDH14C9J2C7 533 aa9.05□□□□□ -0.96
TRIM43-201ENST00000272395 GOLGA8SH3BPF8 625 aa9.05□□□□□ -0.96
TRIM43-201ENST00000272395 RFXAPO00287 272 aa9.05□□□□□ -0.96
TRIM43-201ENST00000272395 MCF2LO15068 1137 aa9.05□□□□□ -0.96
TRIM43-201ENST00000272395 INPPL1O15357 1258 aa9.05□□□□□ -0.96
TRIM43-201ENST00000272395 SPAG7O75391 227 aa9.05□□□□□ -0.96
TRIM43-201ENST00000272395 CSPG5O95196 566 aa9.05□□□□□ -0.96
TRIM43-201ENST00000272395 IFNB1P01574 187 aa9.05□□□□□ -0.96
TRIM43-201ENST00000272395 IGFBP6P24592 240 aaPredicted RBP9.05□□□□□ -0.96
TRIM43-201ENST00000272395 CTNNB1P35222 781 aa9.05□□□□□ -0.96
TRIM43-201ENST00000272395 RPA3P35244 121 aaPredicted RBP9.05□□□□□ -0.96
TRIM43-201ENST00000272395 RPL22P35268 128 aaKnown RBP9.05□□□□□ -0.96
TRIM43-201ENST00000272395 MSH2P43246 934 aa9.05□□□□□ -0.96
TRIM43-201ENST00000272395 SLC11A1P49279 550 aa9.05□□□□□ -0.96
TRIM43-201ENST00000272395 GPX6P59796 221 aa9.05□□□□□ -0.96
TRIM43-201ENST00000272395 KCNJ2P63252 427 aa9.05□□□□□ -0.96
TRIM43-201ENST00000272395 ATP11AP98196 1134 aa9.05□□□□□ -0.96
TRIM43-201ENST00000272395 SOX4Q06945 474 aaPredicted RBP9.05□□□□□ -0.96
TRIM43-201ENST00000272395 MGAT5Q09328 741 aa9.05□□□□□ -0.96
TRIM43-201ENST00000272395 ZNF394Q53GI3 561 aa9.05□□□□□ -0.96
TRIM43-201ENST00000272395 XKR4Q5GH76 650 aa9.05□□□□□ -0.96
TRIM43-201ENST00000272395 FYB2Q5VWT5 728 aa9.05□□□□□ -0.96
TRIM43-201ENST00000272395 JADE1Q6IE81 842 aa9.05□□□□□ -0.96
TRIM43-201ENST00000272395 C4orf22Q6V702 233 aa9.05□□□□□ -0.96
TRIM43-201ENST00000272395 Q7L0L9 218 aa9.05□□□□□ -0.96
TRIM43-201ENST00000272395 TMEM173Q86WV6 379 aaPredicted RBP9.05□□□□□ -0.96
TRIM43-201ENST00000272395 VSIG1Q86XK7 387 aa9.05□□□□□ -0.96
TRIM43-201ENST00000272395 COLGALT1Q8NBJ5 622 aa9.05□□□□□ -0.96
TRIM43-201ENST00000272395 KCTD6Q8NC69 237 aa9.05□□□□□ -0.96
TRIM43-201ENST00000272395 BCL7CQ8WUZ0 217 aaPredicted RBP9.05□□□□□ -0.96
TRIM43-201ENST00000272395 ARNTL2Q8WYA1 636 aa9.05□□□□□ -0.96
TRIM43-201ENST00000272395 KIF12Q96FN5 646 aa9.05□□□□□ -0.96
TRIM43-201ENST00000272395 PPP1R10Q96QC0 940 aaKnown RBP9.05□□□□□ -0.96
TRIM43-201ENST00000272395 PAIP2Q9BPZ3 127 aaKnown RBP9.05□□□□□ -0.96
TRIM43-201ENST00000272395 PAAF1Q9BRP4 392 aa9.05□□□□□ -0.96
TRIM43-201ENST00000272395 CNPY3Q9BT09 278 aa9.05□□□□□ -0.96
TRIM43-201ENST00000272395 MRPL9Q9BYD2 267 aaKnown RBP9.05□□□□□ -0.96
TRIM43-201ENST00000272395 TTYH1Q9H313 450 aaPredicted RBP9.05□□□□□ -0.96
TRIM43-201ENST00000272395 ASB7Q9H672 318 aa9.05□□□□□ -0.96
TRIM43-201ENST00000272395 SAR1AQ9NR31 198 aa9.05□□□□□ -0.96
TRIM43-201ENST00000272395 NOP53Q9NZM5 478 aaKnown RBP9.05□□□□□ -0.96
TRIM43-201ENST00000272395 CNTN3Q9P232 1028 aa9.05□□□□□ -0.96
TRIM43-201ENST00000272395 PRG3Q9Y2Y8 225 aaPredicted RBP9.05□□□□□ -0.96
TRIM43-201ENST00000272395 CFAP69A5D8W1 941 aa9.04□□□□□ -0.96
TRIM43-201ENST00000272395 TRAFD1O14545 582 aaPredicted RBP9.04□□□□□ -0.96
TRIM43-201ENST00000272395 FAM155BO75949 473 aa9.04□□□□□ -0.96
TRIM43-201ENST00000272395 ENDOD1O94919 500 aa9.04□□□□□ -0.96
TRIM43-201ENST00000272395 STAU1O95793 577 aaKnown RBP9.04□□□□□ -0.96
TRIM43-201ENST00000272395 TRUB2O95900 331 aaKnown RBP9.04□□□□□ -0.96
TRIM43-201ENST00000272395 THP07101 528 aa9.04□□□□□ -0.96
TRIM43-201ENST00000272395 KRT16P08779 473 aa9.04□□□□□ -0.96
TRIM43-201ENST00000272395 TROVE2P10155 538 aaKnown RBP eCLIP9.04□□□□□ -0.96
TRIM43-201ENST00000272395 VDRP11473 427 aa9.04□□□□□ -0.96
TRIM43-201ENST00000272395 KCNE1P15382 129 aa9.04□□□□□ -0.96
TRIM43-201ENST00000272395 KRT4P19013 534 aa9.04□□□□□ -0.96
TRIM43-201ENST00000272395 IL1R2P27930 398 aa9.04□□□□□ -0.96
TRIM43-201ENST00000272395 OR1G1P47890 313 aa9.04□□□□□ -0.96
TRIM43-201ENST00000272395 ZNF143P52747 638 aaPredicted RBP9.04□□□□□ -0.96
TRIM43-201ENST00000272395 BCAR1P56945 870 aa9.04□□□□□ -0.96
TRIM43-201ENST00000272395 EIF3EP60228 445 aaKnown RBP9.04□□□□□ -0.96
TRIM43-201ENST00000272395 PDE4CQ08493 712 aa9.04□□□□□ -0.96
TRIM43-201ENST00000272395 SF3A3Q12874 501 aaKnown RBP eCLIP9.04□□□□□ -0.96
TRIM43-201ENST00000272395 GRIK3Q13003 919 aa9.04□□□□□ -0.96
TRIM43-201ENST00000272395 DNAJC3Q13217 504 aa9.04□□□□□ -0.96
TRIM43-201ENST00000272395 STILQ15468 1287 aa9.04□□□□□ -0.96
TRIM43-201ENST00000272395 SEPT7Q16181 437 aaKnown RBP9.04□□□□□ -0.96
TRIM43-201ENST00000272395 SLC45A4Q5BKX6 768 aa9.04□□□□□ -0.96
TRIM43-201ENST00000272395 SCARA3Q6AZY7 606 aa9.04□□□□□ -0.96
TRIM43-201ENST00000272395 SCARA5Q6ZMJ2 495 aa9.04□□□□□ -0.96
TRIM43-201ENST00000272395 C3orf62Q6ZUJ4 267 aa9.04□□□□□ -0.96
TRIM43-201ENST00000272395 FAM47EQ6ZV65 393 aa9.04□□□□□ -0.96
TRIM43-201ENST00000272395 RFX6Q8HWS3 928 aa9.04□□□□□ -0.96
TRIM43-201ENST00000272395 PALM2Q8IXS6 379 aa9.04□□□□□ -0.96
TRIM43-201ENST00000272395 COLGALT2Q8IYK4 626 aa9.04□□□□□ -0.96
TRIM43-201ENST00000272395 HS6ST3Q8IZP7 471 aa9.04□□□□□ -0.96
TRIM43-201ENST00000272395 ARFGAP1Q8N6T3 406 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms