RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 IL21Q9HBE4 155 aa25.67■■□□□ 1.7
SSBP4-201ENST00000270061 F5P12259 2224 aa25.66■■□□□ 1.7
SSBP4-201ENST00000270061 HMGA1P17096 107 aaKnown RBP25.66■■□□□ 1.7
SSBP4-201ENST00000270061 MAGEA11P43364 429 aa25.66■■□□□ 1.7
SSBP4-201ENST00000270061 RPL34P49207 117 aaKnown RBP25.66■■□□□ 1.7
SSBP4-201ENST00000270061 BCAT1P54687 386 aa25.66■■□□□ 1.7
SSBP4-201ENST00000270061 PPP2R5EQ16537 467 aa25.66■■□□□ 1.7
SSBP4-201ENST00000270061 GPR158Q5T848 1215 aa25.66■■□□□ 1.7
SSBP4-201ENST00000270061 C8orf74Q6P047 294 aa25.66■■□□□ 1.7
SSBP4-201ENST00000270061 SCN4BQ8IWT1 228 aa25.66■■□□□ 1.7
SSBP4-201ENST00000270061 TMEM105Q8N8V8 129 aa25.66■■□□□ 1.7
SSBP4-201ENST00000270061 B3GALNT2Q8NCR0 500 aa25.66■■□□□ 1.7
SSBP4-201ENST00000270061 PCED1BQ96HM7 432 aa25.66■■□□□ 1.7
SSBP4-201ENST00000270061 MAGED2Q9UNF1 606 aaPredicted RBP25.66■■□□□ 1.7
SSBP4-201ENST00000270061 MIA3Q5JRA6 1907 aa25.65■■□□□ 1.7
SSBP4-201ENST00000270061 AOC1P19801 751 aa25.65■■□□□ 1.7
SSBP4-201ENST00000270061 RFC1P35251 1148 aaPredicted RBP25.65■■□□□ 1.7
SSBP4-201ENST00000270061 VIPR2P41587 438 aa25.65■■□□□ 1.7
SSBP4-201ENST00000270061 OGDHQ02218 1023 aa25.65■■□□□ 1.7
SSBP4-201ENST00000270061 BST2Q10589 180 aaKnown RBP25.65■■□□□ 1.7
SSBP4-201ENST00000270061 MDH1BQ5I0G3 518 aa25.65■■□□□ 1.7
SSBP4-201ENST00000270061 LRRC38Q5VT99 294 aa25.65■■□□□ 1.7
SSBP4-201ENST00000270061 STKLD1Q8NE28 680 aa25.65■■□□□ 1.7
SSBP4-201ENST00000270061 E2F7Q96AV8 911 aa25.65■■□□□ 1.7
SSBP4-201ENST00000270061 HNRNPABQ99729 332 aaKnown RBP25.65■■□□□ 1.7
SSBP4-201ENST00000270061 ANAPC1Q9H1A4 1944 aa25.65■■□□□ 1.7
SSBP4-201ENST00000270061 GOLGA8SH3BPF8 625 aa25.64■■□□□ 1.7
SSBP4-201ENST00000270061 PSMC3P17980 439 aa25.64■■□□□ 1.7
SSBP4-201ENST00000270061 PTPN1P18031 435 aaKnown RBP25.64■■□□□ 1.7
SSBP4-201ENST00000270061 VSNL1P62760 191 aa25.64■■□□□ 1.7
SSBP4-201ENST00000270061 CYP4F8P98187 520 aa25.64■■□□□ 1.7
SSBP4-201ENST00000270061 GRM2Q14416 872 aa25.64■■□□□ 1.7
SSBP4-201ENST00000270061 PMF1Q6P1K2 205 aa25.64■■□□□ 1.7
SSBP4-201ENST00000270061 VSTM1Q6UX27 236 aa25.64■■□□□ 1.7
SSBP4-201ENST00000270061 VITQ6UXI7 678 aa25.64■■□□□ 1.7
SSBP4-201ENST00000270061 TICRRQ7Z2Z1 1910 aa25.64■■□□□ 1.7
SSBP4-201ENST00000270061 SHDQ96IW2 340 aa25.64■■□□□ 1.7
SSBP4-201ENST00000270061 KRT12Q99456 494 aa25.64■■□□□ 1.7
SSBP4-201ENST00000270061 TRMT61BQ9BVS5 477 aaKnown RBP25.64■■□□□ 1.7
SSBP4-201ENST00000270061 AP1M1Q9BXS5 423 aa25.64■■□□□ 1.7
SSBP4-201ENST00000270061 TBC1D17Q9HA65 648 aa25.64■■□□□ 1.7
SSBP4-201ENST00000270061 ST7Q9NRC1 585 aa25.64■■□□□ 1.7
SSBP4-201ENST00000270061 BDNFP23560 247 aa25.64■■□□□ 1.69
SSBP4-201ENST00000270061 TAS2R40P59535 323 aa25.64■■□□□ 1.69
SSBP4-201ENST00000270061 PDE4CQ08493 712 aa25.64■■□□□ 1.69
SSBP4-201ENST00000270061 ZDHHC17Q8IUH5 632 aa25.64■■□□□ 1.69
SSBP4-201ENST00000270061 ARID3BQ8IVW6 561 aaPredicted RBP25.64■■□□□ 1.69
SSBP4-201ENST00000270061 KATNAL2Q8IYT4 538 aa25.64■■□□□ 1.69
SSBP4-201ENST00000270061 DEPDC1BQ8WUY9 529 aa25.64■■□□□ 1.69
SSBP4-201ENST00000270061 FAM122AQ96E09 287 aa25.64■■□□□ 1.69
SSBP4-201ENST00000270061 TASP1Q9H6P5 420 aa25.64■■□□□ 1.69
SSBP4-201ENST00000270061 BRD9Q9H8M2 597 aa25.64■■□□□ 1.69
SSBP4-201ENST00000270061 UXTQ9UBK9 157 aaPredicted RBP25.64■■□□□ 1.69
SSBP4-201ENST00000270061 E5RJQ4 531 aa25.63■■□□□ 1.69
SSBP4-201ENST00000270061 CCDC130P13994 396 aa25.63■■□□□ 1.69
SSBP4-201ENST00000270061 NUBP1P53384 320 aa25.63■■□□□ 1.69
SSBP4-201ENST00000270061 ACAP1Q15027 740 aa25.63■■□□□ 1.69
SSBP4-201ENST00000270061 SLC44A4Q53GD3 710 aa25.63■■□□□ 1.69
SSBP4-201ENST00000270061 CC2D1AQ6P1N0 951 aaPredicted RBP25.63■■□□□ 1.69
SSBP4-201ENST00000270061 JOSD2Q8TAC2 188 aa25.63■■□□□ 1.69
SSBP4-201ENST00000270061 METTL5Q9NRN9 209 aaKnown RBP25.63■■□□□ 1.69
SSBP4-201ENST00000270061 ZMYM5Q9UJ78 669 aa25.63■■□□□ 1.69
SSBP4-201ENST00000270061 SLC38A8A6NNN8 435 aa25.62■■□□□ 1.69
SSBP4-201ENST00000270061 HEPACAM2A8MVW5 462 aa25.62■■□□□ 1.69
SSBP4-201ENST00000270061 ERLIN1O75477 346 aa25.62■■□□□ 1.69
SSBP4-201ENST00000270061 F11P03951 625 aa25.62■■□□□ 1.69
SSBP4-201ENST00000270061 GRIK1P39086 918 aa25.62■■□□□ 1.69
SSBP4-201ENST00000270061 PLA2G5P39877 138 aa25.62■■□□□ 1.69
SSBP4-201ENST00000270061 MLF2Q15773 248 aaPredicted RBP25.62■■□□□ 1.69
SSBP4-201ENST00000270061 AADACL2Q6P093 401 aa25.62■■□□□ 1.69
SSBP4-201ENST00000270061 TMCO3Q6UWJ1 677 aa25.62■■□□□ 1.69
SSBP4-201ENST00000270061 SLC13A5Q86YT5 568 aaPredicted RBP25.62■■□□□ 1.69
SSBP4-201ENST00000270061 MFSD6LQ8IWD5 586 aa25.62■■□□□ 1.69
SSBP4-201ENST00000270061 TRMT2BQ96GJ1 504 aaKnown RBP25.62■■□□□ 1.69
SSBP4-201ENST00000270061 HSFY1Q96LI6 401 aa25.62■■□□□ 1.69
SSBP4-201ENST00000270061 STIM2Q9P246 746 aa25.62■■□□□ 1.69
SSBP4-201ENST00000270061 DMGDHQ9UI17 866 aaKnown RBP25.62■■□□□ 1.69
SSBP4-201ENST00000270061 GOLGA6L10A0A0M3HER8 536 aa25.61■■□□□ 1.69
SSBP4-201ENST00000270061 F8VP50 259 aa25.61■■□□□ 1.69
SSBP4-201ENST00000270061 TULP2O00295 520 aa25.61■■□□□ 1.69
SSBP4-201ENST00000270061 PI15O43692 258 aa25.61■■□□□ 1.69
SSBP4-201ENST00000270061 PRKCQQ04759 706 aa25.61■■□□□ 1.69
SSBP4-201ENST00000270061 TMEM150AQ86TG1 271 aa25.61■■□□□ 1.69
SSBP4-201ENST00000270061 PRSS33Q8NF86 280 aa25.61■■□□□ 1.69
SSBP4-201ENST00000270061 SLC2A14Q8TDB8 520 aa25.61■■□□□ 1.69
SSBP4-201ENST00000270061 IRF7Q92985 503 aa25.61■■□□□ 1.69
SSBP4-201ENST00000270061 MYRFLQ96LU7 910 aa25.61■■□□□ 1.69
SSBP4-201ENST00000270061 SART1O43290 800 aaKnown RBP25.61■■□□□ 1.69
SSBP4-201ENST00000270061 ADORA2BP29275 332 aa25.61■■□□□ 1.69
SSBP4-201ENST00000270061 GDI1P31150 447 aa25.61■■□□□ 1.69
SSBP4-201ENST00000270061 ACADSBP45954 432 aa25.61■■□□□ 1.69
SSBP4-201ENST00000270061 PLA2G4AP47712 749 aa25.61■■□□□ 1.69
SSBP4-201ENST00000270061 STARD6P59095 220 aa25.61■■□□□ 1.69
SSBP4-201ENST00000270061 FAM102AQ5T9C2 384 aaPredicted RBP25.61■■□□□ 1.69
SSBP4-201ENST00000270061 OR6B2Q6IFH4 312 aa25.61■■□□□ 1.69
SSBP4-201ENST00000270061 FAM183BPQ6ZVS7 135 aa25.61■■□□□ 1.69
SSBP4-201ENST00000270061 FUKQ8N0W3 1084 aa25.61■■□□□ 1.69
SSBP4-201ENST00000270061 EXD1Q8NHP7 514 aa25.61■■□□□ 1.69
SSBP4-201ENST00000270061 DNASE1L2Q92874 299 aa25.61■■□□□ 1.69
SSBP4-201ENST00000270061 SPATA17Q96L03 361 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms