RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 SERPINB11Q96P15 392 aa13.29□□□□□ -0.28
SS18-202ENST00000269138 TBCBQ99426 244 aa13.29□□□□□ -0.28
SS18-202ENST00000269138 SELENOOQ9BVL4 669 aa13.29□□□□□ -0.28
SS18-202ENST00000269138 DEF6Q9H4E7 631 aa13.29□□□□□ -0.28
SS18-202ENST00000269138 ECT2Q9H8V3 914 aa13.29□□□□□ -0.28
SS18-202ENST00000269138 SPTLC3Q9NUV7 552 aa13.29□□□□□ -0.28
SS18-202ENST00000269138 DDIT4Q9NX09 232 aa13.29□□□□□ -0.28
SS18-202ENST00000269138 TBC1D14Q9P2M4 693 aa13.29□□□□□ -0.28
SS18-202ENST00000269138 TLR6Q9Y2C9 796 aa13.29□□□□□ -0.28
SS18-202ENST00000269138 C2CD4BA6NLJ0 364 aa13.28□□□□□ -0.28
SS18-202ENST00000269138 SLC9A3R1O14745 358 aaPredicted RBP13.28□□□□□ -0.28
SS18-202ENST00000269138 AKR1B10O60218 316 aa13.28□□□□□ -0.28
SS18-202ENST00000269138 PDGFBP01127 241 aaPredicted RBP13.28□□□□□ -0.28
SS18-202ENST00000269138 CYP17A1P05093 508 aa13.28□□□□□ -0.28
SS18-202ENST00000269138 PDGFRAP16234 1089 aa13.28□□□□□ -0.28
SS18-202ENST00000269138 CD72P21854 359 aa13.28□□□□□ -0.28
SS18-202ENST00000269138 HARS2P49590 506 aaKnown RBP13.28□□□□□ -0.28
SS18-202ENST00000269138 KPNA1P52294 538 aaPredicted RBP13.28□□□□□ -0.28
SS18-202ENST00000269138 ATXN1P54253 815 aaKnown RBP13.28□□□□□ -0.28
SS18-202ENST00000269138 VCPP55072 806 aaKnown RBP13.28□□□□□ -0.28
SS18-202ENST00000269138 DHCR24Q15392 516 aa13.28□□□□□ -0.28
SS18-202ENST00000269138 MLF2Q15773 248 aaPredicted RBP13.28□□□□□ -0.28
SS18-202ENST00000269138 SLC18A3Q16572 532 aa13.28□□□□□ -0.28
SS18-202ENST00000269138 C15orf59Q2T9L4 293 aaPredicted RBP13.28□□□□□ -0.28
SS18-202ENST00000269138 SLC25A52Q3SY17 297 aa13.28□□□□□ -0.28
SS18-202ENST00000269138 CCDC14Q49A88 953 aa13.28□□□□□ -0.28
SS18-202ENST00000269138 SH3PXD2AQ5TCZ1 1133 aa13.28□□□□□ -0.28
SS18-202ENST00000269138 NAIF1Q69YI7 327 aaPredicted RBP13.28□□□□□ -0.28
SS18-202ENST00000269138 PLEKHA7Q6IQ23 1121 aa13.28□□□□□ -0.28
SS18-202ENST00000269138 ARCQ7LC44 396 aa13.28□□□□□ -0.28
SS18-202ENST00000269138 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.28□□□□□ -0.28
SS18-202ENST00000269138 TMEM25Q86YD3 366 aa13.28□□□□□ -0.28
SS18-202ENST00000269138 KIAA1958Q8N8K9 716 aa13.28□□□□□ -0.28
SS18-202ENST00000269138 ATP2A3Q93084 1043 aa13.28□□□□□ -0.28
SS18-202ENST00000269138 CHFRQ96EP1 664 aa13.28□□□□□ -0.28
SS18-202ENST00000269138 CCDC42Q96M95 316 aa13.28□□□□□ -0.28
SS18-202ENST00000269138 MCEEQ96PE7 176 aa13.28□□□□□ -0.28
SS18-202ENST00000269138 PANX2Q96RD6 677 aa13.28□□□□□ -0.28
SS18-202ENST00000269138 PACSIN1Q9BY11 444 aa13.28□□□□□ -0.28
SS18-202ENST00000269138 DCLK3Q9C098 648 aa13.28□□□□□ -0.28
SS18-202ENST00000269138 THAP2Q9H0W7 228 aa13.28□□□□□ -0.28
SS18-202ENST00000269138 ARHGEF3Q9NR81 526 aa13.28□□□□□ -0.28
SS18-202ENST00000269138 MYO1AQ9UBC5 1043 aa13.28□□□□□ -0.28
SS18-202ENST00000269138 CNOT8Q9UFF9 292 aaKnown RBP13.28□□□□□ -0.28
SS18-202ENST00000269138 XPO7Q9UIA9 1087 aaKnown RBP13.28□□□□□ -0.28
SS18-202ENST00000269138 PIAS3Q9Y6X2 628 aa13.28□□□□□ -0.28
SS18-202ENST00000269138 TRIOO75962 3097 aa13.27□□□□□ -0.29
SS18-202ENST00000269138 KIF26AQ9ULI4 1882 aaPredicted RBP13.27□□□□□ -0.29
SS18-202ENST00000269138 GOLGA6L7A0A1B0GV03 622 aa13.27□□□□□ -0.29
SS18-202ENST00000269138 TMEM221A6NGB7 291 aa13.27□□□□□ -0.29
SS18-202ENST00000269138 M0R296 226 aa13.27□□□□□ -0.29
SS18-202ENST00000269138 TRDMT1O14717 391 aaKnown RBP13.27□□□□□ -0.29
SS18-202ENST00000269138 MOCS2O96007 188 aaPredicted RBP13.27□□□□□ -0.29
SS18-202ENST00000269138 GBP1P32455 592 aa13.27□□□□□ -0.29
SS18-202ENST00000269138 GALCP54803 685 aa13.27□□□□□ -0.29
SS18-202ENST00000269138 ATP11AP98196 1134 aa13.27□□□□□ -0.29
SS18-202ENST00000269138 OGDHQ02218 1023 aa13.27□□□□□ -0.29
SS18-202ENST00000269138 RING1Q06587 406 aa13.27□□□□□ -0.29
SS18-202ENST00000269138 NNTQ13423 1086 aa13.27□□□□□ -0.29
SS18-202ENST00000269138 GAB4Q2WGN9 574 aa13.27□□□□□ -0.29
SS18-202ENST00000269138 LY6G5CQ5SRR4 150 aa13.27□□□□□ -0.29
SS18-202ENST00000269138 TXNDC11Q6PKC3 985 aa13.27□□□□□ -0.29
SS18-202ENST00000269138 TPRG1Q6ZUI0 275 aa13.27□□□□□ -0.29
SS18-202ENST00000269138 CPA6Q8N4T0 437 aa13.27□□□□□ -0.29
SS18-202ENST00000269138 ARHGEF26Q96DR7 871 aa13.27□□□□□ -0.29
SS18-202ENST00000269138 TRIM7Q9C029 511 aa13.27□□□□□ -0.29
SS18-202ENST00000269138 PIGVQ9NUD9 493 aa13.27□□□□□ -0.29
SS18-202ENST00000269138 PARVAQ9NVD7 372 aa13.27□□□□□ -0.29
SS18-202ENST00000269138 RRN3Q9NYV6 651 aa13.27□□□□□ -0.29
SS18-202ENST00000269138 IMPACTQ9P2X3 320 aa13.27□□□□□ -0.29
SS18-202ENST00000269138 STAP1Q9ULZ2 295 aa13.27□□□□□ -0.29
SS18-202ENST00000269138 TECTAO75443 2155 aa13.26□□□□□ -0.29
SS18-202ENST00000269138 FAM86C2PA6NEL3 165 aa13.26□□□□□ -0.29
SS18-202ENST00000269138 KCNU1A8MYU2 1149 aa13.26□□□□□ -0.29
SS18-202ENST00000269138 SPECC1L-ADORA2AF8WAN1 911 aa13.26□□□□□ -0.29
SS18-202ENST00000269138 NFATC1O95644 943 aa13.26□□□□□ -0.29
SS18-202ENST00000269138 GPD1P21695 349 aa13.26□□□□□ -0.29
SS18-202ENST00000269138 FECHP22830 423 aa13.26□□□□□ -0.29
SS18-202ENST00000269138 GJA4P35212 333 aa13.26□□□□□ -0.29
SS18-202ENST00000269138 DEUP1Q05D60 604 aa13.26□□□□□ -0.29
SS18-202ENST00000269138 CDO1Q16878 200 aa13.26□□□□□ -0.29
SS18-202ENST00000269138 NUGGCQ68CJ6 796 aa13.26□□□□□ -0.29
SS18-202ENST00000269138 NADSYN1Q6IA69 706 aa13.26□□□□□ -0.29
SS18-202ENST00000269138 DCUN1D2Q6PH85 259 aa13.26□□□□□ -0.29
SS18-202ENST00000269138 TPGS1Q6ZTW0 290 aa13.26□□□□□ -0.29
SS18-202ENST00000269138 BNIPLQ7Z465 357 aa13.26□□□□□ -0.29
SS18-202ENST00000269138 UNC45BQ8IWX7 931 aa13.26□□□□□ -0.29
SS18-202ENST00000269138 RNF34Q969K3 372 aa13.26□□□□□ -0.29
SS18-202ENST00000269138 OTUB2Q96DC9 234 aa13.26□□□□□ -0.29
SS18-202ENST00000269138 C11orf16Q9NQ32 467 aa13.26□□□□□ -0.29
SS18-202ENST00000269138 ANLNQ9NQW6 1124 aa13.26□□□□□ -0.29
SS18-202ENST00000269138 SPHK2Q9NRA0 654 aa13.26□□□□□ -0.29
SS18-202ENST00000269138 ZNF510Q9Y2H8 683 aa13.26□□□□□ -0.29
SS18-202ENST00000269138 COL4A2P08572 1712 aa13.26□□□□□ -0.29
SS18-202ENST00000269138 TMEM191CA6NGB0 347 aa13.25□□□□□ -0.29
SS18-202ENST00000269138 SOWAHDA6NJG2 315 aa13.25□□□□□ -0.29
SS18-202ENST00000269138 I6L893 689 aaPredicted RBP13.25□□□□□ -0.29
SS18-202ENST00000269138 ACSL4O60488 711 aa13.25□□□□□ -0.29
SS18-202ENST00000269138 TSPAN3O60637 253 aa13.25□□□□□ -0.29
SS18-202ENST00000269138 CYP1A2P05177 515 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms