RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 NCKIPSDQ9NZQ3 722 aa18.46■□□□□ 0.55
COL5A3-201ENST00000264828 CCL15-CCL14A0A0B4J2E2 113 aa18.46■□□□□ 0.54
COL5A3-201ENST00000264828 TBC1D12O60347 775 aa18.46■□□□□ 0.54
COL5A3-201ENST00000264828 ALDH9A1P49189 494 aa18.46■□□□□ 0.54
COL5A3-201ENST00000264828 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.46■□□□□ 0.54
COL5A3-201ENST00000264828 CCL15Q16663 113 aa18.46■□□□□ 0.54
COL5A3-201ENST00000264828 EPHX4Q8IUS5 362 aa18.46■□□□□ 0.54
COL5A3-201ENST00000264828 RNFT2Q96EX2 444 aa18.46■□□□□ 0.54
COL5A3-201ENST00000264828 PDGFCQ9NRA1 345 aa18.46■□□□□ 0.54
COL5A3-201ENST00000264828 ARHGAP20Q9P2F6 1191 aa18.46■□□□□ 0.54
COL5A3-201ENST00000264828 ADAM30Q9UKF2 790 aa18.46■□□□□ 0.54
COL5A3-201ENST00000264828 PROSCO94903 275 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 CELF2O95319 508 aaKnown RBP18.45■□□□□ 0.54
COL5A3-201ENST00000264828 RBP1P09455 135 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 PRLRP16471 622 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 PKN2Q16513 984 aaKnown RBP18.45■□□□□ 0.54
COL5A3-201ENST00000264828 TTI2Q6NXR4 508 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 MPZL3Q6UWV2 235 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 WDR36Q8NI36 951 aaKnown RBP18.45■□□□□ 0.54
COL5A3-201ENST00000264828 CAVIN3Q969G5 261 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 VPS33AQ96AX1 596 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 CGRRF1Q99675 332 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 BTBD10Q9BSF8 475 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 PAIP1Q9H074 479 aaKnown RBP18.45■□□□□ 0.54
COL5A3-201ENST00000264828 NOL6Q9H6R4 1146 aaKnown RBP18.45■□□□□ 0.54
COL5A3-201ENST00000264828 FBXO28Q9NVF7 368 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 ATG7O95352 703 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 CETPP11597 493 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 FASP25445 335 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 TALDO1P37837 337 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 ITGA9Q13797 1035 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 DPP10Q8N608 796 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 RXFP2Q8WXD0 754 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 C19orf60Q96EN9 201 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 CELF6Q96J87 481 aaKnown RBP18.45■□□□□ 0.54
COL5A3-201ENST00000264828 TCF7L2Q9NQB0 619 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 ARMCX1Q9P291 453 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 STAG3L1P0CL83 205 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 CPT1AP50416 773 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 KCTD21Q4G0X4 260 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 TAS1R2Q8TE23 839 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 CAMKK2Q96RR4 588 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 SLC24A2Q9UI40 661 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 TTLL13PA6NNM8 815 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 MAP3K13O43283 966 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 LTFP02788 710 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 SOX10P56693 466 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 CYP2R1Q6VVX0 501 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 EXD1Q8NHP7 514 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 MYLK2Q9H1R3 596 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 ELOVL6Q9H5J4 265 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 AVENQ9NQS1 362 aaPredicted RBP18.45■□□□□ 0.54
COL5A3-201ENST00000264828 KLHL3Q9UH77 587 aa18.45■□□□□ 0.54
COL5A3-201ENST00000264828 INPP4BO15327 924 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 NDUFB5O43674 189 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 CYP7B1O75881 506 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 SLC25A27O95847 323 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 FCGR1AP12314 374 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 STARD3Q14849 445 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 GNASQ5JWF2 1037 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 CHST13Q8NET6 341 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 TCP10LQ8TDR4 215 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 MAN1C1Q9NR34 630 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 GPR75-ASB3A0A0A6YYF3 556 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 SLCO1B7G3V0H7 640 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 HS6ST1O60243 411 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 CSDE1O75534 798 aaKnown RBP18.44■□□□□ 0.54
COL5A3-201ENST00000264828 B3GAT3O94766 335 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 FAM153BP0C7A2 387 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 TOB1P50616 345 aaPredicted RBP18.44■□□□□ 0.54
COL5A3-201ENST00000264828 SLC15A2Q16348 729 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 PKN1Q16512 942 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 FAM153CQ494X1 144 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 ZNF57Q68EA5 555 aaPredicted RBP18.44■□□□□ 0.54
COL5A3-201ENST00000264828 C3orf67Q6ZVT6 689 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 GPRC5AQ8NFJ5 357 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 OXNAD1Q96HP4 312 aaPredicted RBP18.44■□□□□ 0.54
COL5A3-201ENST00000264828 RGS18Q9NS28 235 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 MYL6P60660 151 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 C1DQ13901 141 aaKnown RBP18.44■□□□□ 0.54
COL5A3-201ENST00000264828 TRMT5Q32P41 509 aaKnown RBP18.44■□□□□ 0.54
COL5A3-201ENST00000264828 TRIQKQ629K1 86 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 CLVS1Q8IUQ0 354 aaPredicted RBP18.44■□□□□ 0.54
COL5A3-201ENST00000264828 KLHL1Q9NR64 748 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 RRN3P2A6NIE6 340 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 MPOP05164 745 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 C4BPBP20851 252 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 CCNG2Q16589 344 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 FAM98BQ52LJ0 330 aaKnown RBP18.44■□□□□ 0.54
COL5A3-201ENST00000264828 PDZK1Q5T2W1 519 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 CES3Q6UWW8 571 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 SPPL2AQ8TCT8 520 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 UBASH3BQ8TF42 649 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 DRG1Q9Y295 367 aaKnown RBP18.44■□□□□ 0.54
COL5A3-201ENST00000264828 SPACA6W5XKT8 324 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 CEMIPQ8WUJ3 1361 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 CRTAMO95727 393 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 FGFR3P22607 806 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 SLC34A1Q06495 639 aa18.44■□□□□ 0.54
COL5A3-201ENST00000264828 DEFB129Q9H1M3 183 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms