RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 PFKMP08237 780 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 INSRRP14616 1297 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 GOT1P17174 413 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 ARF4P18085 180 aaPredicted RBP9.44□□□□□ -0.9
MSH4-201ENST00000263187 CCNG1P51959 295 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 PDE1BQ01064 536 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 AP1B1Q10567 949 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 TMEM132DQ14C87 1099 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 N4BP2L1Q5TBK1 243 aaPredicted RBP9.44□□□□□ -0.9
MSH4-201ENST00000263187 MAP7D3Q8IWC1 876 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 ULK2Q8IYT8 1036 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 NME8Q8N427 588 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 CCDC185Q8N715 623 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 STKLD1Q8NE28 680 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 C18orf25Q96B23 403 aaPredicted RBP9.44□□□□□ -0.9
MSH4-201ENST00000263187 FAM149B1Q96BN6 582 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 APOL2Q9BQE5 337 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 PTPRHQ9HD43 1115 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 TPP1O14773 563 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 CREB3O43889 395 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 MGAT1P26572 445 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 OAZ1P54368 228 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 ZNF280AP59817 542 aaPredicted RBP9.43□□□□□ -0.9
MSH4-201ENST00000263187 PITX1P78337 314 aaPredicted RBP9.43□□□□□ -0.9
MSH4-201ENST00000263187 USP4Q13107 963 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 ZNF618Q5T7W0 954 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 LPCAT4Q643R3 524 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 ADAM32Q8TC27 787 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 SLC26A7Q8TE54 656 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 MTBPQ96DY7 904 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 BCO2Q9BYV7 579 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 FAM49AQ9H0Q0 323 aaPredicted RBP9.43□□□□□ -0.9
MSH4-201ENST00000263187 TLE6Q9H808 572 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 IFT122Q9HBG6 1241 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 DPP3Q9NY33 737 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 KLK14Q9P0G3 267 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 C2CD2Q9Y426 696 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 TRIP11Q15643 1979 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 ARID2Q68CP9 1835 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 C19orf81C9J6K1 198 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 KCNK1O00180 336 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 IRF6O14896 467 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 PAPSS1O43252 624 aaPredicted RBP9.43□□□□□ -0.9
MSH4-201ENST00000263187 GABBR2O75899 941 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 KRT38O76015 456 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 C1QAP02745 245 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 SKIP12755 728 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 ICAM3P32942 547 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 ABCD1P33897 745 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 CACNA2D1P54289 1103 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 HDAC4P56524 1084 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 KIZQ2M2Z5 673 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 CFAP157Q5JU67 520 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 CTU1Q7Z7A3 348 aaKnown RBP9.43□□□□□ -0.9
MSH4-201ENST00000263187 DNERQ8NFT8 737 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 FZD8Q9H461 694 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 SSU72Q9NP77 194 aaKnown RBP9.43□□□□□ -0.9
MSH4-201ENST00000263187 WDR35Q9P2L0 1181 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 HBS1LQ9Y450 684 aaKnown RBP9.43□□□□□ -0.9
MSH4-201ENST00000263187 GOLGA8QA0A0J9YX86 632 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 GOLGA8OA6NCC3 632 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 A6NJR5 290 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 GOLGA8NF8WBI6 632 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 TXNDC9O14530 226 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 CHADO15335 359 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 ADCY6O43306 1168 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 CIB2O75838 187 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 PROCP04070 461 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 TTLL12Q14166 644 aaPredicted RBP9.43□□□□□ -0.9
MSH4-201ENST00000263187 TAZQ16635 292 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 ATG16L1Q676U5 607 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 RAPH1Q70E73 1250 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 ZNF534Q76KX8 674 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 CHSY1Q86X52 802 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 C10orf107Q8IVU9 208 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 FNIP1Q8TF40 1166 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 ZNF778Q96MU6 729 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 NT5C1AQ9BXI3 368 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 NRDE2Q9H7Z3 1164 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 CAB39LQ9H9S4 337 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 XAB2Q9HCS7 855 aaKnown RBP9.43□□□□□ -0.9
MSH4-201ENST00000263187 CPSF2Q9P2I0 782 aaKnown RBP9.43□□□□□ -0.9
MSH4-201ENST00000263187 CACNG4Q9UBN1 327 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 NME7Q9Y5B8 376 aa9.43□□□□□ -0.9
MSH4-201ENST00000263187 E9PBE3 544 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 SMAPO00193 183 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 NEMP1O14524 444 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 KLHL41O60662 606 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 AP1G2O75843 785 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 DGKIO75912 1065 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 VDRP11473 427 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 ETS2P15036 469 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 ANPEPP15144 967 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 ACADSP16219 412 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 AKAP5P24588 427 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 NUMBP49757 651 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 ENPEPQ07075 957 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 NME3Q13232 169 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 DLG2Q15700 870 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 SOWAHAQ2M3V2 549 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms