RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 MOSPD3O75425 235 aa28.61■■■□□ 2.17
SMARCD3-201ENST00000262188 RALAP11233 206 aa28.61■■■□□ 2.17
SMARCD3-201ENST00000262188 SMTNL2Q2TAL5 461 aa28.61■■■□□ 2.17
SMARCD3-201ENST00000262188 ANKRD54Q6NXT1 300 aa28.61■■■□□ 2.17
SMARCD3-201ENST00000262188 PDZD4Q76G19 769 aaPredicted RBP28.61■■■□□ 2.17
SMARCD3-201ENST00000262188 GADD45GIP1Q8TAE8 222 aaPredicted RBP28.61■■■□□ 2.17
SMARCD3-201ENST00000262188 ING5Q8WYH8 240 aa28.61■■■□□ 2.17
SMARCD3-201ENST00000262188 OVCA2Q8WZ82 227 aa28.61■■■□□ 2.17
SMARCD3-201ENST00000262188 CENPIQ92674 756 aaPredicted RBP28.61■■■□□ 2.17
SMARCD3-201ENST00000262188 ZWILCHQ9H900 591 aa28.61■■■□□ 2.17
SMARCD3-201ENST00000262188 HMBSP08397 361 aa28.61■■■□□ 2.17
SMARCD3-201ENST00000262188 CORO7P57737 925 aa28.61■■■□□ 2.17
SMARCD3-201ENST00000262188 CCDC85BQ15834 202 aaPredicted RBP28.61■■■□□ 2.17
SMARCD3-201ENST00000262188 PABPC1LQ4VXU2 614 aaKnown RBP28.61■■■□□ 2.17
SMARCD3-201ENST00000262188 KCNT1Q5JUK3 1230 aa28.61■■■□□ 2.17
SMARCD3-201ENST00000262188 MEI1Q5TIA1 1274 aa28.61■■■□□ 2.17
SMARCD3-201ENST00000262188 POTEHQ6S545 545 aa28.61■■■□□ 2.17
SMARCD3-201ENST00000262188 RTL10Q7L3V2 364 aa28.61■■■□□ 2.17
SMARCD3-201ENST00000262188 SYCE1Q8N0S2 351 aa28.61■■■□□ 2.17
SMARCD3-201ENST00000262188 GAS2L1Q99501 681 aaPredicted RBP28.61■■■□□ 2.17
SMARCD3-201ENST00000262188 TLR10Q9BXR5 811 aa28.61■■■□□ 2.17
SMARCD3-201ENST00000262188 ANLNQ9NQW6 1124 aa28.61■■■□□ 2.17
SMARCD3-201ENST00000262188 AMFRQ9UKV5 643 aa28.61■■■□□ 2.17
SMARCD3-201ENST00000262188 RNF8O76064 485 aa28.6■■■□□ 2.17
SMARCD3-201ENST00000262188 DEUP1Q05D60 604 aa28.6■■■□□ 2.17
SMARCD3-201ENST00000262188 HABP4Q5JVS0 413 aaKnown RBP28.6■■■□□ 2.17
SMARCD3-201ENST00000262188 HECTD3Q5T447 861 aa28.6■■■□□ 2.17
SMARCD3-201ENST00000262188 SNX30Q5VWJ9 437 aa28.6■■■□□ 2.17
SMARCD3-201ENST00000262188 TMEM184AQ6ZMB5 413 aa28.6■■■□□ 2.17
SMARCD3-201ENST00000262188 BNIPLQ7Z465 357 aa28.6■■■□□ 2.17
SMARCD3-201ENST00000262188 MAB21L3Q8N8X9 362 aa28.6■■■□□ 2.17
SMARCD3-201ENST00000262188 CD101Q93033 1021 aa28.6■■■□□ 2.17
SMARCD3-201ENST00000262188 SMOC2Q9H3U7 446 aa28.6■■■□□ 2.17
SMARCD3-201ENST00000262188 GPATCH2LQ9NWQ4 482 aa28.6■■■□□ 2.17
SMARCD3-201ENST00000262188 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.6■■■□□ 2.17
SMARCD3-201ENST00000262188 POLR3GO15318 223 aaPredicted RBP28.59■■■□□ 2.17
SMARCD3-201ENST00000262188 OAS2P29728 719 aaKnown RBP28.59■■■□□ 2.17
SMARCD3-201ENST00000262188 MAN1A1P33908 653 aa28.59■■■□□ 2.17
SMARCD3-201ENST00000262188 TEAD2Q15562 447 aa28.59■■■□□ 2.17
SMARCD3-201ENST00000262188 CLUL1Q15846 466 aa28.59■■■□□ 2.17
SMARCD3-201ENST00000262188 ELMSAN1Q6PJG2 1045 aa28.59■■■□□ 2.17
SMARCD3-201ENST00000262188 CYP4V2Q6ZWL3 525 aaPredicted RBP28.59■■■□□ 2.17
SMARCD3-201ENST00000262188 CCDC185Q8N715 623 aa28.59■■■□□ 2.17
SMARCD3-201ENST00000262188 ARL14EPQ8N8R7 260 aaPredicted RBP28.59■■■□□ 2.17
SMARCD3-201ENST00000262188 CDX2Q99626 313 aaPredicted RBP28.59■■■□□ 2.17
SMARCD3-201ENST00000262188 WDR6Q9NNW5 1121 aaKnown RBP28.59■■■□□ 2.17
SMARCD3-201ENST00000262188 DZANK1Q9NVP4 752 aa28.59■■■□□ 2.17
SMARCD3-201ENST00000262188 PPP1R12AO14974 1030 aaPredicted RBP28.59■■■□□ 2.17
SMARCD3-201ENST00000262188 OAS1P00973 400 aaKnown RBP28.59■■■□□ 2.17
SMARCD3-201ENST00000262188 IGLV3-25P01717 112 aa28.59■■■□□ 2.17
SMARCD3-201ENST00000262188 EPHA5P54756 1037 aa28.59■■■□□ 2.17
SMARCD3-201ENST00000262188 SLC25A11Q02978 314 aaKnown RBP28.59■■■□□ 2.17
SMARCD3-201ENST00000262188 BEND5Q7L4P6 421 aa28.59■■■□□ 2.17
SMARCD3-201ENST00000262188 ITFG1Q8TB96 612 aa28.59■■■□□ 2.17
SMARCD3-201ENST00000262188 NACA2Q9H009 215 aa28.59■■■□□ 2.17
SMARCD3-201ENST00000262188 MARCH2Q9P0N8 246 aa28.59■■■□□ 2.17
SMARCD3-201ENST00000262188 USP18Q9UMW8 372 aa28.59■■■□□ 2.17
SMARCD3-201ENST00000262188 I6L893 689 aaPredicted RBP28.58■■■□□ 2.17
SMARCD3-201ENST00000262188 POU3F3P20264 500 aaPredicted RBP28.58■■■□□ 2.17
SMARCD3-201ENST00000262188 LTBRP36941 435 aa28.58■■■□□ 2.17
SMARCD3-201ENST00000262188 MSANTD2Q6P1R3 559 aa28.58■■■□□ 2.17
SMARCD3-201ENST00000262188 TTC16Q8NEE8 873 aa28.58■■■□□ 2.17
SMARCD3-201ENST00000262188 ALG3Q92685 438 aa28.58■■■□□ 2.17
SMARCD3-201ENST00000262188 TRIM62Q9BVG3 475 aa28.58■■■□□ 2.17
SMARCD3-201ENST00000262188 SMG9Q9H0W8 520 aaKnown RBP28.58■■■□□ 2.17
SMARCD3-201ENST00000262188 SMPD4Q9NXE4 827 aa28.58■■■□□ 2.17
SMARCD3-201ENST00000262188 NOL12Q9UGY1 213 aaKnown RBP eCLIP28.58■■■□□ 2.17
SMARCD3-201ENST00000262188 IRAK2O43187 625 aa28.57■■■□□ 2.16
SMARCD3-201ENST00000262188 CXCR5P32302 372 aa28.57■■■□□ 2.16
SMARCD3-201ENST00000262188 RDXP35241 583 aaKnown RBP28.57■■■□□ 2.16
SMARCD3-201ENST00000262188 SLC1A1P43005 524 aa28.57■■■□□ 2.16
SMARCD3-201ENST00000262188 ERCC6LQ2NKX8 1250 aa28.57■■■□□ 2.16
SMARCD3-201ENST00000262188 ZC3H12AQ5D1E8 599 aaKnown RBP28.57■■■□□ 2.16
SMARCD3-201ENST00000262188 PRSS36Q5K4E3 855 aa28.57■■■□□ 2.16
SMARCD3-201ENST00000262188 STRADAQ7RTN6 431 aa28.57■■■□□ 2.16
SMARCD3-201ENST00000262188 MRPS31Q92665 395 aaKnown RBP28.57■■■□□ 2.16
SMARCD3-201ENST00000262188 CALR3Q96L12 384 aaKnown RBP28.57■■■□□ 2.16
SMARCD3-201ENST00000262188 GKN1Q9NS71 199 aa28.57■■■□□ 2.16
SMARCD3-201ENST00000262188 DENND4CQ5VZ89 1909 aa28.57■■■□□ 2.16
SMARCD3-201ENST00000262188 SLC12A8A0AV02 714 aa28.57■■■□□ 2.16
SMARCD3-201ENST00000262188 DDX3YO15523 660 aaKnown RBP28.57■■■□□ 2.16
SMARCD3-201ENST00000262188 CEBPBP17676 345 aa28.57■■■□□ 2.16
SMARCD3-201ENST00000262188 CBX2Q14781 532 aaPredicted RBP28.57■■■□□ 2.16
SMARCD3-201ENST00000262188 LLGL1Q15334 1064 aa28.57■■■□□ 2.16
SMARCD3-201ENST00000262188 CTC1Q2NKJ3 1217 aa28.57■■■□□ 2.16
SMARCD3-201ENST00000262188 GUCD1Q96NT3 240 aa28.57■■■□□ 2.16
SMARCD3-201ENST00000262188 UNC80Q8N2C7 3258 aa28.56■■■□□ 2.16
SMARCD3-201ENST00000262188 SCAMP3O14828 347 aaKnown RBP28.56■■■□□ 2.16
SMARCD3-201ENST00000262188 ENDOD1O94919 500 aa28.56■■■□□ 2.16
SMARCD3-201ENST00000262188 CDC25CP30307 473 aa28.56■■■□□ 2.16
SMARCD3-201ENST00000262188 ATP5C1P36542 298 aaKnown RBP28.56■■■□□ 2.16
SMARCD3-201ENST00000262188 AADACL2Q6P093 401 aa28.56■■■□□ 2.16
SMARCD3-201ENST00000262188 WBP2Q969T9 261 aa28.56■■■□□ 2.16
SMARCD3-201ENST00000262188 HES6Q96HZ4 224 aa28.56■■■□□ 2.16
SMARCD3-201ENST00000262188 GCNAQ96QF7 691 aa28.56■■■□□ 2.16
SMARCD3-201ENST00000262188 SLC46A2Q9BY10 475 aa28.56■■■□□ 2.16
SMARCD3-201ENST00000262188 BRWD1Q9NSI6 2320 aa28.56■■■□□ 2.16
SMARCD3-201ENST00000262188 SRGAP2O75044 1071 aa28.55■■■□□ 2.16
SMARCD3-201ENST00000262188 EIF4EBP2Q13542 120 aaPredicted RBP28.55■■■□□ 2.16
SMARCD3-201ENST00000262188 CA9Q16790 459 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms