RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 DRG1Q9Y295 367 aaKnown RBP13.43□□□□□ -0.26
SNX1-201ENST00000261889 E7ENQ6 273 aa13.42□□□□□ -0.26
SNX1-201ENST00000261889 VWA5AO00534 786 aa13.42□□□□□ -0.26
SNX1-201ENST00000261889 KRT37O76014 449 aa13.42□□□□□ -0.26
SNX1-201ENST00000261889 DHRS4L1P0CG22 281 aa13.42□□□□□ -0.26
SNX1-201ENST00000261889 ASPAP45381 313 aa13.42□□□□□ -0.26
SNX1-201ENST00000261889 ACTR3P61158 418 aa13.42□□□□□ -0.26
SNX1-201ENST00000261889 CCNIQ14094 377 aa13.42□□□□□ -0.26
SNX1-201ENST00000261889 DOCK1Q14185 1865 aa13.42□□□□□ -0.26
SNX1-201ENST00000261889 CYTH1Q15438 398 aa13.42□□□□□ -0.26
SNX1-201ENST00000261889 LIN52Q52LA3 116 aa13.42□□□□□ -0.26
SNX1-201ENST00000261889 NBPF12Q5TAG4 269 aaPredicted RBP13.42□□□□□ -0.26
SNX1-201ENST00000261889 TTC39BQ5VTQ0 682 aaPredicted RBP13.42□□□□□ -0.26
SNX1-201ENST00000261889 MAP1SQ66K74 1059 aaPredicted RBP13.42□□□□□ -0.26
SNX1-201ENST00000261889 CNKSR2Q8WXI2 1034 aa13.42□□□□□ -0.26
SNX1-201ENST00000261889 KLHL4Q9C0H6 718 aa13.42□□□□□ -0.26
SNX1-201ENST00000261889 ELOVL4Q9GZR5 314 aa13.42□□□□□ -0.26
SNX1-201ENST00000261889 MINDY3Q9H8M7 445 aa13.42□□□□□ -0.26
SNX1-201ENST00000261889 MICAL2O94851 1124 aa13.42□□□□□ -0.26
SNX1-201ENST00000261889 CSPG5O95196 566 aa13.42□□□□□ -0.26
SNX1-201ENST00000261889 ACVR1CQ8NER5 493 aa13.42□□□□□ -0.26
SNX1-201ENST00000261889 CEP70Q8NHQ1 597 aa13.42□□□□□ -0.26
SNX1-201ENST00000261889 NTPCRQ9BSD7 190 aaKnown RBP13.42□□□□□ -0.26
SNX1-201ENST00000261889 GPRC5DQ9NZD1 345 aa13.42□□□□□ -0.26
SNX1-201ENST00000261889 UBP1Q9NZI7 540 aa13.42□□□□□ -0.26
SNX1-201ENST00000261889 POLR2AP24928 1970 aaKnown RBP13.42□□□□□ -0.26
SNX1-201ENST00000261889 SIN3BO75182 1162 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 CCND2P30279 289 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 USP46P62068 366 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 NRF1Q16656 503 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 EFHC1Q5JVL4 640 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 C6orf52Q5T4I8 152 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 RPS27LQ71UM5 84 aaKnown RBP13.41□□□□□ -0.26
SNX1-201ENST00000261889 TTC16Q8NEE8 873 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 MAPK15Q8TD08 544 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 CCDC106Q9BWC9 280 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 SSC5DA1L4H1 1573 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 SLC15A5A6NIM6 579 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 PRPSAP2O60256 369 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 AVPR1AP37288 418 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 IRF9Q00978 393 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 SLC10A2Q12908 348 aaPredicted RBP13.41□□□□□ -0.26
SNX1-201ENST00000261889 GLRA4Q5JXX5 417 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 SPDYAQ5MJ70 313 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 NXNQ6DKJ4 435 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 TRIM72Q6ZMU5 477 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 CTU1Q7Z7A3 348 aaKnown RBP13.41□□□□□ -0.26
SNX1-201ENST00000261889 DHDDSQ86SQ9 333 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 SPATA24Q86W54 205 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 PLD6Q8N2A8 252 aaKnown RBP13.41□□□□□ -0.26
SNX1-201ENST00000261889 COPS5Q92905 334 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 WWP1Q9H0M0 922 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 TMEM216Q9P0N5 145 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 ZNF212Q9UDV6 495 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 CITO14578 2027 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 APOC4-APOC2K7ER74 178 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 BUD23O43709 281 aaKnown RBP13.41□□□□□ -0.26
SNX1-201ENST00000261889 ZBTB14O43829 449 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 TRUB2O95900 331 aaKnown RBP13.41□□□□□ -0.26
SNX1-201ENST00000261889 APOC2P02655 101 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 SFNP31947 248 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 GMPSP49915 693 aaPredicted RBP13.41□□□□□ -0.26
SNX1-201ENST00000261889 MED21Q13503 144 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 TEX44Q53QW1 395 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 C9orf131Q5VYM1 1079 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 FAM183BPQ6ZVS7 135 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 KDELC2Q7Z4H8 507 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 ARHGAP22Q7Z5H3 698 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 PLD5Q8N7P1 536 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 PCDH19Q8TAB3 1148 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 SGF29Q96ES7 293 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 COPS7BQ9H9Q2 264 aaPredicted RBP13.41□□□□□ -0.26
SNX1-201ENST00000261889 MYOZ2Q9NPC6 264 aa13.41□□□□□ -0.26
SNX1-201ENST00000261889 TRIP11Q15643 1979 aa13.4□□□□□ -0.26
SNX1-201ENST00000261889 KCNK1O00180 336 aa13.4□□□□□ -0.26
SNX1-201ENST00000261889 NOP56O00567 594 aaKnown RBP13.4□□□□□ -0.26
SNX1-201ENST00000261889 LYPLA2O95372 231 aa13.4□□□□□ -0.26
SNX1-201ENST00000261889 CHRNGP07510 517 aa13.4□□□□□ -0.26
SNX1-201ENST00000261889 HDCP19113 662 aa13.4□□□□□ -0.26
SNX1-201ENST00000261889 TBXAS1P24557 533 aaPredicted RBP13.4□□□□□ -0.26
SNX1-201ENST00000261889 EPHA3P29320 983 aa13.4□□□□□ -0.26
SNX1-201ENST00000261889 SLC1A6P48664 564 aa13.4□□□□□ -0.26
SNX1-201ENST00000261889 KCNJ11Q14654 390 aa13.4□□□□□ -0.26
SNX1-201ENST00000261889 ZRSR2Q15696 482 aaKnown RBP13.4□□□□□ -0.26
SNX1-201ENST00000261889 SLC9B1Q4ZJI4 515 aa13.4□□□□□ -0.26
SNX1-201ENST00000261889 RBM44Q6ZP01 1051 aaKnown RBP13.4□□□□□ -0.26
SNX1-201ENST00000261889 MYLK4Q86YV6 388 aaPredicted RBP13.4□□□□□ -0.26
SNX1-201ENST00000261889 CPNE9Q8IYJ1 553 aa13.4□□□□□ -0.26
SNX1-201ENST00000261889 USP29Q9HBJ7 922 aa13.4□□□□□ -0.26
SNX1-201ENST00000261889 S100A14Q9HCY8 104 aa13.4□□□□□ -0.26
SNX1-201ENST00000261889 PARP14Q460N5 1801 aa13.4□□□□□ -0.26
SNX1-201ENST00000261889 KLHL33A6NCF5 533 aa13.4□□□□□ -0.26
SNX1-201ENST00000261889 KRT7P08729 469 aa13.4□□□□□ -0.26
SNX1-201ENST00000261889 ENO3P13929 434 aaPredicted RBP13.4□□□□□ -0.26
SNX1-201ENST00000261889 VCLP18206 1134 aa13.4□□□□□ -0.26
SNX1-201ENST00000261889 CYP3A5P20815 502 aa13.4□□□□□ -0.26
SNX1-201ENST00000261889 MGAT1P26572 445 aa13.4□□□□□ -0.26
SNX1-201ENST00000261889 STIP1P31948 543 aaKnown RBP13.4□□□□□ -0.26
SNX1-201ENST00000261889 CPOXP36551 454 aa13.4□□□□□ -0.26
SNX1-201ENST00000261889 NUDT2P50583 147 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms