RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 MRPS17Q9Y2R5 130 aaKnown RBP17.49■□□□□ 0.39
SDCBP-201ENST00000260130 SIT1Q9Y3P8 196 aa17.49■□□□□ 0.39
SDCBP-201ENST00000260130 AKR1B15C9JRZ8 316 aaPredicted RBP17.48■□□□□ 0.39
SDCBP-201ENST00000260130 ATP8B1O43520 1251 aa17.48■□□□□ 0.39
SDCBP-201ENST00000260130 AOC1P19801 751 aa17.48■□□□□ 0.39
SDCBP-201ENST00000260130 AMPD2Q01433 879 aa17.48■□□□□ 0.39
SDCBP-201ENST00000260130 UBXN2BQ14CS0 331 aa17.48■□□□□ 0.39
SDCBP-201ENST00000260130 ASIC2Q16515 512 aa17.48■□□□□ 0.39
SDCBP-201ENST00000260130 OLFML1Q6UWY5 402 aa17.48■□□□□ 0.39
SDCBP-201ENST00000260130 TOGARAM2Q6ZUX3 1019 aa17.48■□□□□ 0.39
SDCBP-201ENST00000260130 DCLK3Q9C098 648 aa17.48■□□□□ 0.39
SDCBP-201ENST00000260130 LTB4R2Q9NPC1 389 aa17.48■□□□□ 0.39
SDCBP-201ENST00000260130 HBS1LQ9Y450 684 aaKnown RBP17.48■□□□□ 0.39
SDCBP-201ENST00000260130 KIF26AQ9ULI4 1882 aaPredicted RBP17.48■□□□□ 0.39
SDCBP-201ENST00000260130 ITIH6Q6UXX5 1313 aa17.48■□□□□ 0.39
SDCBP-201ENST00000260130 FAM170AA1A519 330 aa17.47■□□□□ 0.39
SDCBP-201ENST00000260130 FANCGO15287 622 aa17.47■□□□□ 0.39
SDCBP-201ENST00000260130 PI15O43692 258 aa17.47■□□□□ 0.39
SDCBP-201ENST00000260130 UNGP13051 313 aaPredicted RBP17.47■□□□□ 0.39
SDCBP-201ENST00000260130 GJA4P35212 333 aa17.47■□□□□ 0.39
SDCBP-201ENST00000260130 SYPL2Q5VXT5 272 aa17.47■□□□□ 0.39
SDCBP-201ENST00000260130 CPLX3Q8WVH0 158 aa17.47■□□□□ 0.39
SDCBP-201ENST00000260130 PLD4Q96BZ4 506 aa17.47■□□□□ 0.39
SDCBP-201ENST00000260130 NUCKS1Q9H1E3 243 aaKnown RBP17.47■□□□□ 0.39
SDCBP-201ENST00000260130 CAPN11Q9UMQ6 739 aa17.47■□□□□ 0.39
SDCBP-201ENST00000260130 ZNF510Q9Y2H8 683 aa17.47■□□□□ 0.39
SDCBP-201ENST00000260130 MTF2Q9Y483 593 aaPredicted RBP17.47■□□□□ 0.39
SDCBP-201ENST00000260130 COL4A2P08572 1712 aa17.47■□□□□ 0.39
SDCBP-201ENST00000260130 TICRRQ7Z2Z1 1910 aa17.47■□□□□ 0.39
SDCBP-201ENST00000260130 FAM170BA6NMN3 283 aa17.47■□□□□ 0.39
SDCBP-201ENST00000260130 HSF2BPO75031 334 aa17.47■□□□□ 0.39
SDCBP-201ENST00000260130 ZRANB2O95218 330 aaKnown RBP eCLIP17.47■□□□□ 0.39
SDCBP-201ENST00000260130 KLKB1P03952 638 aa17.47■□□□□ 0.39
SDCBP-201ENST00000260130 CCDC175P0C221 793 aa17.47■□□□□ 0.39
SDCBP-201ENST00000260130 AVPR2P30518 371 aa17.47■□□□□ 0.39
SDCBP-201ENST00000260130 DHCR24Q15392 516 aa17.47■□□□□ 0.39
SDCBP-201ENST00000260130 TRIP4Q15650 581 aaPredicted RBP17.47■□□□□ 0.39
SDCBP-201ENST00000260130 RHBDF2Q6PJF5 856 aa17.47■□□□□ 0.39
SDCBP-201ENST00000260130 TXNDC11Q6PKC3 985 aa17.47■□□□□ 0.39
SDCBP-201ENST00000260130 Q6ZNB5 142 aa17.47■□□□□ 0.39
SDCBP-201ENST00000260130 XYLT1Q86Y38 959 aa17.47■□□□□ 0.39
SDCBP-201ENST00000260130 PJA1Q8NG27 643 aa17.47■□□□□ 0.39
SDCBP-201ENST00000260130 OSBPL6Q9BZF3 934 aa17.47■□□□□ 0.39
SDCBP-201ENST00000260130 SEPT11Q9NVA2 429 aaKnown RBP17.47■□□□□ 0.39
SDCBP-201ENST00000260130 MRFAP1Q9Y605 127 aa17.47■□□□□ 0.39
SDCBP-201ENST00000260130 COL4A3Q01955 1670 aa17.46■□□□□ 0.39
SDCBP-201ENST00000260130 MSI1O43347 362 aaKnown RBP17.46■□□□□ 0.39
SDCBP-201ENST00000260130 CYP17A1P05093 508 aa17.46■□□□□ 0.39
SDCBP-201ENST00000260130 MMP8P22894 467 aa17.46■□□□□ 0.39
SDCBP-201ENST00000260130 CORO1AP31146 461 aaKnown RBP17.46■□□□□ 0.39
SDCBP-201ENST00000260130 PRKCIP41743 596 aa17.46■□□□□ 0.39
SDCBP-201ENST00000260130 VCPP55072 806 aaKnown RBP17.46■□□□□ 0.39
SDCBP-201ENST00000260130 ZBED6P86452 979 aa17.46■□□□□ 0.39
SDCBP-201ENST00000260130 CLEC16AQ2KHT3 1053 aa17.46■□□□□ 0.39
SDCBP-201ENST00000260130 C2CD6Q53TS8 623 aa17.46■□□□□ 0.39
SDCBP-201ENST00000260130 SLC26A9Q7LBE3 791 aa17.46■□□□□ 0.39
SDCBP-201ENST00000260130 GPR161Q8N6U8 529 aaKnown RBP17.46■□□□□ 0.39
SDCBP-201ENST00000260130 SLC30A5Q8TAD4 765 aa17.46■□□□□ 0.39
SDCBP-201ENST00000260130 DQX1Q8TE96 717 aaKnown RBP17.46■□□□□ 0.39
SDCBP-201ENST00000260130 CHFRQ96EP1 664 aa17.46■□□□□ 0.39
SDCBP-201ENST00000260130 NDRG2Q9UN36 371 aaKnown RBP17.46■□□□□ 0.39
SDCBP-201ENST00000260130 LUC7L2Q9Y383 392 aaKnown RBP17.46■□□□□ 0.39
SDCBP-201ENST00000260130 GRAP2O75791 330 aa17.46■□□□□ 0.39
SDCBP-201ENST00000260130 GYPCP04921 128 aa17.46■□□□□ 0.39
SDCBP-201ENST00000260130 TNFAIP3P21580 790 aa17.46■□□□□ 0.39
SDCBP-201ENST00000260130 TARSP26639 723 aaKnown RBP17.46■□□□□ 0.39
SDCBP-201ENST00000260130 HARS2P49590 506 aaKnown RBP17.46■□□□□ 0.39
SDCBP-201ENST00000260130 CENPCQ03188 943 aa17.46■□□□□ 0.39
SDCBP-201ENST00000260130 DCAF6Q58WW2 860 aa17.46■□□□□ 0.39
SDCBP-201ENST00000260130 DEFB106AQ8N104 65 aa17.46■□□□□ 0.39
SDCBP-201ENST00000260130 TMEM105Q8N8V8 129 aa17.46■□□□□ 0.39
SDCBP-201ENST00000260130 SLC2A13Q96QE2 648 aa17.46■□□□□ 0.39
SDCBP-201ENST00000260130 WDR24Q96S15 920 aa17.46■□□□□ 0.39
SDCBP-201ENST00000260130 SYT11Q9BT88 431 aa17.46■□□□□ 0.39
SDCBP-201ENST00000260130 HAUS4Q9H6D7 363 aa17.46■□□□□ 0.39
SDCBP-201ENST00000260130 AGO1Q9UL18 857 aaKnown RBP17.46■□□□□ 0.39
SDCBP-201ENST00000260130 ADH1CP00326 375 aa17.45■□□□□ 0.38
SDCBP-201ENST00000260130 SCNN1AP37088 669 aa17.45■□□□□ 0.38
SDCBP-201ENST00000260130 NSFP46459 744 aaKnown RBP17.45■□□□□ 0.38
SDCBP-201ENST00000260130 KLHL30Q0D2K2 578 aa17.45■□□□□ 0.38
SDCBP-201ENST00000260130 LY6G5CQ5SRR4 150 aa17.45■□□□□ 0.38
SDCBP-201ENST00000260130 MMS22LQ6ZRQ5 1243 aa17.45■□□□□ 0.38
SDCBP-201ENST00000260130 DENND1CQ8IV53 801 aa17.45■□□□□ 0.38
SDCBP-201ENST00000260130 ZNF687Q8N1G0 1237 aa17.45■□□□□ 0.38
SDCBP-201ENST00000260130 SYN2Q92777 582 aaPredicted RBP17.45■□□□□ 0.38
SDCBP-201ENST00000260130 SERPINB11Q96P15 392 aa17.45■□□□□ 0.38
SDCBP-201ENST00000260130 SPHK2Q9NRA0 654 aa17.45■□□□□ 0.38
SDCBP-201ENST00000260130 NCAM2O15394 837 aa17.45■□□□□ 0.38
SDCBP-201ENST00000260130 DCNP07585 359 aaKnown RBP17.45■□□□□ 0.38
SDCBP-201ENST00000260130 TBX4P57082 545 aa17.45■□□□□ 0.38
SDCBP-201ENST00000260130 RING1Q06587 406 aa17.45■□□□□ 0.38
SDCBP-201ENST00000260130 PON2Q15165 354 aa17.45■□□□□ 0.38
SDCBP-201ENST00000260130 TMEM25Q86YD3 366 aa17.45■□□□□ 0.38
SDCBP-201ENST00000260130 CCDC105Q8IYK2 499 aa17.45■□□□□ 0.38
SDCBP-201ENST00000260130 ADAM32Q8TC27 787 aa17.45■□□□□ 0.38
SDCBP-201ENST00000260130 TRDMT1O14717 391 aaKnown RBP17.44■□□□□ 0.38
SDCBP-201ENST00000260130 TRUB2O95900 331 aaKnown RBP17.44■□□□□ 0.38
SDCBP-201ENST00000260130 ADH5P11766 374 aa17.44■□□□□ 0.38
SDCBP-201ENST00000260130 CASP14P31944 242 aa17.44■□□□□ 0.38
SDCBP-201ENST00000260130 RNASE9P60153 205 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms