RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 PQLC3Q8N755 202 aa15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 NKD2Q969F2 451 aaPredicted RBP15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 ATXN7L3BQ96GX2 97 aa15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 PCED1BQ96HM7 432 aa15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 B3GALT6Q96L58 329 aa15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 SYT15Q9BQS2 421 aa15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 DDIT4Q9NX09 232 aa15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 HAO1Q9UJM8 370 aa15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 KIAA1257Q9ULG3 409 aa15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 MGEA5O60502 916 aa15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 FAM200BP0CF97 657 aa15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 IL4RP24394 825 aa15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 DEUP1Q05D60 604 aa15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 RWDD4Q6NW29 188 aaKnown RBP15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 USP33Q8TEY7 942 aa15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 FNIP1Q8TF40 1166 aa15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 SERPINB12Q96P63 405 aa15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 KCTD15Q96SI1 283 aaPredicted RBP15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 TMEM30AQ9NV96 361 aa15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 RNF186Q9NXI6 227 aa15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 DUSP11O75319 330 aaKnown RBP15.15■□□□□ 0.02
TRAFD1-201ENST00000257604 PBX3P40426 434 aa15.15■□□□□ 0.02
TRAFD1-201ENST00000257604 GABRB2P47870 512 aa15.15■□□□□ 0.02
TRAFD1-201ENST00000257604 GPX6P59796 221 aa15.15■□□□□ 0.02
TRAFD1-201ENST00000257604 YWHAZP63104 245 aaKnown RBP15.15■□□□□ 0.02
TRAFD1-201ENST00000257604 BMPR2Q13873 1038 aa15.15■□□□□ 0.02
TRAFD1-201ENST00000257604 TIGD5Q53EQ6 642 aa15.15■□□□□ 0.02
TRAFD1-201ENST00000257604 ARHGEF18Q6ZSZ5 1173 aa15.15■□□□□ 0.02
TRAFD1-201ENST00000257604 CYP4V2Q6ZWL3 525 aaPredicted RBP15.15■□□□□ 0.02
TRAFD1-201ENST00000257604 TMEM110Q86TL2 294 aa15.15■□□□□ 0.02
TRAFD1-201ENST00000257604 VSIG1Q86XK7 387 aa15.15■□□□□ 0.02
TRAFD1-201ENST00000257604 UNC5BQ8IZJ1 945 aa15.15■□□□□ 0.02
TRAFD1-201ENST00000257604 CELF6Q96J87 481 aaKnown RBP15.15■□□□□ 0.02
TRAFD1-201ENST00000257604 SMC6Q96SB8 1091 aa15.15■□□□□ 0.02
TRAFD1-201ENST00000257604 SLC4A5Q9BY07 1137 aa15.15■□□□□ 0.02
TRAFD1-201ENST00000257604 SLC13A1Q9BZW2 595 aa15.15■□□□□ 0.02
TRAFD1-201ENST00000257604 TRPV6Q9H1D0 765 aa15.15■□□□□ 0.02
TRAFD1-201ENST00000257604 NRDE2Q9H7Z3 1164 aa15.15■□□□□ 0.02
TRAFD1-201ENST00000257604 CRTAC1Q9NQ79 661 aa15.15■□□□□ 0.02
TRAFD1-201ENST00000257604 SLC17A6Q9P2U8 582 aa15.15■□□□□ 0.02
TRAFD1-201ENST00000257604 GTF2IRD1Q9UHL9 959 aa15.15■□□□□ 0.02
TRAFD1-201ENST00000257604 RPA3P35244 121 aaPredicted RBP15.15■□□□□ 0.02
TRAFD1-201ENST00000257604 CDC42EP1Q00587 391 aa15.15■□□□□ 0.02
TRAFD1-201ENST00000257604 BNIP1Q12981 228 aa15.15■□□□□ 0.02
TRAFD1-201ENST00000257604 HEATR6Q6AI08 1181 aaKnown RBP15.15■□□□□ 0.02
TRAFD1-201ENST00000257604 AGMOQ6ZNB7 445 aa15.15■□□□□ 0.02
TRAFD1-201ENST00000257604 NT5DC4Q86YG4 428 aa15.15■□□□□ 0.02
TRAFD1-201ENST00000257604 SCAMP5Q8TAC9 235 aa15.15■□□□□ 0.02
TRAFD1-201ENST00000257604 ZCWPW1Q9H0M4 648 aa15.15■□□□□ 0.02
TRAFD1-201ENST00000257604 DRG1Q9Y295 367 aaKnown RBP15.15■□□□□ 0.02
TRAFD1-201ENST00000257604 TRPV2Q9Y5S1 764 aa15.15■□□□□ 0.02
TRAFD1-201ENST00000257604 METTL18O95568 372 aa15.14■□□□□ 0.01
TRAFD1-201ENST00000257604 NPR3P17342 541 aa15.14■□□□□ 0.01
TRAFD1-201ENST00000257604 STAT4Q14765 748 aa15.14■□□□□ 0.01
TRAFD1-201ENST00000257604 HHATQ5VTY9 493 aa15.14■□□□□ 0.01
TRAFD1-201ENST00000257604 ALKAL1Q6UXT8 129 aa15.14■□□□□ 0.01
TRAFD1-201ENST00000257604 CCHCR1Q8TD31 782 aa15.14■□□□□ 0.01
TRAFD1-201ENST00000257604 SOCS4Q8WXH5 440 aa15.14■□□□□ 0.01
TRAFD1-201ENST00000257604 PCK1P35558 622 aa15.14■□□□□ 0.01
TRAFD1-201ENST00000257604 ADAM17P78536 824 aa15.14■□□□□ 0.01
TRAFD1-201ENST00000257604 TAF11Q15544 211 aa15.14■□□□□ 0.01
TRAFD1-201ENST00000257604 KBTBD12Q3ZCT8 623 aa15.14■□□□□ 0.01
TRAFD1-201ENST00000257604 SPDYCQ5MJ68 293 aa15.14■□□□□ 0.01
TRAFD1-201ENST00000257604 CGB2Q6NT52 195 aa15.14■□□□□ 0.01
TRAFD1-201ENST00000257604 TAF2Q6P1X5 1199 aa15.14■□□□□ 0.01
TRAFD1-201ENST00000257604 CLEC20AQ6ZU45 233 aa15.14■□□□□ 0.01
TRAFD1-201ENST00000257604 PAFAH2Q99487 392 aa15.14■□□□□ 0.01
TRAFD1-201ENST00000257604 FAM72CH0Y354 149 aa15.14■□□□□ 0.01
TRAFD1-201ENST00000257604 OAS1P00973 400 aaKnown RBP15.14■□□□□ 0.01
TRAFD1-201ENST00000257604 HOXD8P13378 290 aaPredicted RBP15.14■□□□□ 0.01
TRAFD1-201ENST00000257604 ATP5DP30049 168 aa15.14■□□□□ 0.01
TRAFD1-201ENST00000257604 OVGP1Q12889 678 aa15.14■□□□□ 0.01
TRAFD1-201ENST00000257604 STILQ15468 1287 aa15.14■□□□□ 0.01
TRAFD1-201ENST00000257604 ANKRD20A2Q5SQ80 823 aa15.14■□□□□ 0.01
TRAFD1-201ENST00000257604 FAM72AQ5TYM5 149 aa15.14■□□□□ 0.01
TRAFD1-201ENST00000257604 ANKRD20A1Q5TYW2 823 aa15.14■□□□□ 0.01
TRAFD1-201ENST00000257604 ANKRD20A3Q5VUR7 823 aa15.14■□□□□ 0.01
TRAFD1-201ENST00000257604 FAM72DQ6L9T8 149 aa15.14■□□□□ 0.01
TRAFD1-201ENST00000257604 FAM72BQ86X60 149 aa15.14■□□□□ 0.01
TRAFD1-201ENST00000257604 ECHDC2Q86YB7 292 aa15.14■□□□□ 0.01
TRAFD1-201ENST00000257604 ROPN1BQ9BZX4 212 aaPredicted RBP15.14■□□□□ 0.01
TRAFD1-201ENST00000257604 ROPN1Q9HAT0 212 aaPredicted RBP15.14■□□□□ 0.01
TRAFD1-201ENST00000257604 ARL2BPQ9Y2Y0 163 aa15.14■□□□□ 0.01
TRAFD1-201ENST00000257604 NUP205Q92621 2012 aa15.14■□□□□ 0.01
TRAFD1-201ENST00000257604 ANK1P16157 1881 aa15.13■□□□□ 0.01
TRAFD1-201ENST00000257604 CLUHO75153 1309 aa15.13■□□□□ 0.01
TRAFD1-201ENST00000257604 HAS3O00219 553 aa15.13■□□□□ 0.01
TRAFD1-201ENST00000257604 UGT1A9O60656 530 aa15.13■□□□□ 0.01
TRAFD1-201ENST00000257604 CBX6O95503 412 aa15.13■□□□□ 0.01
TRAFD1-201ENST00000257604 RIPK1Q13546 671 aa15.13■□□□□ 0.01
TRAFD1-201ENST00000257604 NOMO1Q15155 1222 aa15.13■□□□□ 0.01
TRAFD1-201ENST00000257604 GALNTL6Q49A17 601 aa15.13■□□□□ 0.01
TRAFD1-201ENST00000257604 THEMIS2Q5TEJ8 643 aa15.13■□□□□ 0.01
TRAFD1-201ENST00000257604 PRPF39Q86UA1 669 aaKnown RBP15.13■□□□□ 0.01
TRAFD1-201ENST00000257604 UNC93AQ86WB7 457 aa15.13■□□□□ 0.01
TRAFD1-201ENST00000257604 ZNF354CQ86Y25 554 aa15.13■□□□□ 0.01
TRAFD1-201ENST00000257604 MPP5Q8N3R9 675 aa15.13■□□□□ 0.01
TRAFD1-201ENST00000257604 ANKLE1Q8NAG6 615 aa15.13■□□□□ 0.01
TRAFD1-201ENST00000257604 GSTCDQ8NEC7 633 aa15.13■□□□□ 0.01
TRAFD1-201ENST00000257604 ERP27Q96DN0 273 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms