RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 ADAM12O43184 909 aa19.6■□□□□ 0.73
TRIM47-201ENST00000254816 TBC1D4O60343 1298 aa19.6■□□□□ 0.73
TRIM47-201ENST00000254816 AMPD1P23109 780 aa19.6■□□□□ 0.73
TRIM47-201ENST00000254816 WDR5P61964 334 aaKnown RBP19.6■□□□□ 0.73
TRIM47-201ENST00000254816 USP46P62068 366 aa19.6■□□□□ 0.73
TRIM47-201ENST00000254816 SKOR1P84550 965 aa19.6■□□□□ 0.73
TRIM47-201ENST00000254816 ZNF844Q08AG5 666 aa19.6■□□□□ 0.73
TRIM47-201ENST00000254816 NOMO1Q15155 1222 aa19.6■□□□□ 0.73
TRIM47-201ENST00000254816 P3H1Q32P28 736 aa19.6■□□□□ 0.73
TRIM47-201ENST00000254816 MFSD5Q6N075 450 aa19.6■□□□□ 0.73
TRIM47-201ENST00000254816 TAC4Q86UU9 113 aa19.6■□□□□ 0.73
TRIM47-201ENST00000254816 SCML4Q8N228 414 aa19.6■□□□□ 0.73
TRIM47-201ENST00000254816 CCDC33Q8N5R6 958 aa19.6■□□□□ 0.73
TRIM47-201ENST00000254816 CCDC89Q8N998 374 aa19.6■□□□□ 0.73
TRIM47-201ENST00000254816 IGSF21Q96ID5 467 aa19.6■□□□□ 0.73
TRIM47-201ENST00000254816 NMUR1Q9HB89 426 aa19.6■□□□□ 0.73
TRIM47-201ENST00000254816 RRP15Q9Y3B9 282 aaKnown RBP19.6■□□□□ 0.73
TRIM47-201ENST00000254816 ALPK3Q96L96 1907 aa19.6■□□□□ 0.73
TRIM47-201ENST00000254816 MCF2LO15068 1137 aa19.6■□□□□ 0.73
TRIM47-201ENST00000254816 CREB3O43889 395 aa19.6■□□□□ 0.73
TRIM47-201ENST00000254816 NR1D1P20393 614 aa19.6■□□□□ 0.73
TRIM47-201ENST00000254816 GBP1P32455 592 aa19.6■□□□□ 0.73
TRIM47-201ENST00000254816 IZUMO3Q5VZ72 239 aa19.6■□□□□ 0.73
TRIM47-201ENST00000254816 VSTM1Q6UX27 236 aa19.6■□□□□ 0.73
TRIM47-201ENST00000254816 OTOP2Q7RTS6 562 aa19.6■□□□□ 0.73
TRIM47-201ENST00000254816 SCD5Q86SK9 330 aa19.6■□□□□ 0.73
TRIM47-201ENST00000254816 ZNF689Q96CS4 500 aaPredicted RBP19.6■□□□□ 0.73
TRIM47-201ENST00000254816 PWWP2AQ96N64 755 aa19.6■□□□□ 0.73
TRIM47-201ENST00000254816 SEPT5Q99719 369 aaPredicted RBP19.6■□□□□ 0.73
TRIM47-201ENST00000254816 TMBIM4Q9HC24 238 aa19.6■□□□□ 0.73
TRIM47-201ENST00000254816 ETNK2Q9NVF9 386 aa19.6■□□□□ 0.73
TRIM47-201ENST00000254816 TRIM66O15016 1216 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 ITIH2P19823 946 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 GUCY1A3Q02108 690 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 GPS1Q13098 491 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 GPR17Q13304 367 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 MGAT5BQ3V5L5 792 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 BTBD8Q5XKL5 378 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 KCNT2Q6UVM3 1135 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 LRIG3Q6UXM1 1119 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 ANKS3Q6ZW76 656 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 SRLQ86TD4 932 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 NUP93Q8N1F7 819 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 TAB3Q8N5C8 712 aaPredicted RBP19.59■□□□□ 0.73
TRIM47-201ENST00000254816 DQX1Q8TE96 717 aaKnown RBP19.59■□□□□ 0.73
TRIM47-201ENST00000254816 C8orf48Q96LL4 319 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 FRMD8P1Q9BZ68 369 aaPredicted RBP19.59■□□□□ 0.73
TRIM47-201ENST00000254816 MTRF1LQ9UGC7 380 aaKnown RBP19.59■□□□□ 0.73
TRIM47-201ENST00000254816 ANAPC5Q9UJX4 755 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 A0A1W2PQH9 124 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 GOLGA6L10A6NI86 522 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 ANKRD65E5RJM6 399 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 FAM72CH0Y354 149 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 H7C4K7 107 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 HPDP32754 393 aaPredicted RBP19.59■□□□□ 0.73
TRIM47-201ENST00000254816 ADRA1BP35368 520 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 CHKAP35790 457 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 FAM72AQ5TYM5 149 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 FAM72DQ6L9T8 149 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 DARS2Q6PI48 645 aaKnown RBP19.59■□□□□ 0.73
TRIM47-201ENST00000254816 KDM7AQ6ZMT4 941 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 CCDC25Q86WR0 208 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 FAM72BQ86X60 149 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 TMEM199Q8N511 208 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 FAM71DQ8N9W8 422 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 NETO2Q8NC67 525 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 FBXO22Q8NEZ5 403 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 BCAS4Q8TDM0 211 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 RSAD2Q8WXG1 361 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 PGAP3Q96FM1 320 aaPredicted RBP19.59■□□□□ 0.73
TRIM47-201ENST00000254816 TXLNGYQ9BZA5 131 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 LRRC4CQ9HCJ2 640 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 DNAJC17Q9NVM6 304 aaKnown RBP19.59■□□□□ 0.73
TRIM47-201ENST00000254816 OSER1Q9NX31 292 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 SFMBT1Q9UHJ3 866 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 FBXW11Q9UKB1 542 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 SNX10Q9Y5X0 201 aa19.59■□□□□ 0.73
TRIM47-201ENST00000254816 H7C0C1 242 aa19.58■□□□□ 0.73
TRIM47-201ENST00000254816 EFEMP2O95967 443 aa19.58■□□□□ 0.73
TRIM47-201ENST00000254816 MYZAPP0CAP1 466 aa19.58■□□□□ 0.73
TRIM47-201ENST00000254816 TGM2P21980 687 aa19.58■□□□□ 0.73
TRIM47-201ENST00000254816 ARL4AP40617 200 aa19.58■□□□□ 0.73
TRIM47-201ENST00000254816 ATP5OP48047 213 aa19.58■□□□□ 0.73
TRIM47-201ENST00000254816 CCT5P48643 541 aa19.58■□□□□ 0.73
TRIM47-201ENST00000254816 GBE1Q04446 702 aa19.58■□□□□ 0.73
TRIM47-201ENST00000254816 SLC10A2Q12908 348 aaPredicted RBP19.58■□□□□ 0.73
TRIM47-201ENST00000254816 DUSP4Q13115 394 aa19.58■□□□□ 0.73
TRIM47-201ENST00000254816 USP41Q3LFD5 358 aa19.58■□□□□ 0.73
TRIM47-201ENST00000254816 EFHC2Q5JST6 749 aa19.58■□□□□ 0.73
TRIM47-201ENST00000254816 UBAP2Q5T6F2 1119 aaKnown RBP19.58■□□□□ 0.73
TRIM47-201ENST00000254816 RHBDF2Q6PJF5 856 aa19.58■□□□□ 0.73
TRIM47-201ENST00000254816 VSIG1Q86XK7 387 aa19.58■□□□□ 0.73
TRIM47-201ENST00000254816 RC3H2Q9HBD1 1191 aaKnown RBP19.58■□□□□ 0.73
TRIM47-201ENST00000254816 HMGB1P1B2RPK0 211 aaPredicted RBP19.58■□□□□ 0.72
TRIM47-201ENST00000254816 PPFIA2O75334 1257 aa19.58■□□□□ 0.72
TRIM47-201ENST00000254816 EN2P19622 333 aaPredicted RBP19.58■□□□□ 0.72
TRIM47-201ENST00000254816 MAGEA11P43364 429 aa19.58■□□□□ 0.72
TRIM47-201ENST00000254816 ROR1Q01973 937 aa19.58■□□□□ 0.72
TRIM47-201ENST00000254816 MTMR3Q13615 1198 aa19.58■□□□□ 0.72
TRIM47-201ENST00000254816 BTG3Q14201 252 aaPredicted RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms