RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 TNFSF9P41273 254 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 RPL5P46777 297 aaKnown RBP4.28□□□□□ -1.72
UBE4A-201ENST00000252108 GMPSP49915 693 aaPredicted RBP4.28□□□□□ -1.72
UBE4A-201ENST00000252108 RPS6KA3P51812 740 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 MSS51Q4VC12 460 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 PLEKHG4Q58EX7 1191 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 STXBP5Q5T5C0 1151 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 ILDR2Q71H61 639 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 PRUNE1Q86TP1 453 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 ALDH16A1Q8IZ83 802 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 TWNKQ96RR1 684 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 TBCBQ99426 244 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 THTPAQ9BU02 230 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 SNX25Q9H3E2 840 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 USP29Q9HBJ7 922 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 MTMR10Q9NXD2 777 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 TJP2Q9UDY2 1190 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 ITGA11Q9UKX5 1188 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 ADCY6O43306 1168 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 SH3BP5O60239 455 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 TM7SF2O76062 418 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 IL18RAPO95256 599 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 ENO1P06733 434 aaKnown RBP4.28□□□□□ -1.72
UBE4A-201ENST00000252108 EIF2AK2P19525 551 aaKnown RBP4.28□□□□□ -1.72
UBE4A-201ENST00000252108 PPARDQ03181 441 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 PRPSAP1Q14558 356 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 DUOXA2Q1HG44 320 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 IZUMO2Q6UXV1 221 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 B3GNT6Q6ZMB0 384 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 BHLHA9Q7RTU4 235 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 OTOAQ7RTW8 1153 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 PRPF39Q86UA1 669 aaKnown RBP4.28□□□□□ -1.72
UBE4A-201ENST00000252108 PPM1NQ8N819 430 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 PTPRN2Q92932 1015 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 ISL2Q96A47 359 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 ZNF570Q96NI8 536 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 ACAP3Q96P50 834 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 ECSITQ9BQ95 431 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 TRIM56Q9BRZ2 755 aaKnown RBP4.28□□□□□ -1.72
UBE4A-201ENST00000252108 CNPY3Q9BT09 278 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 NIF3L1Q9GZT8 377 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 RBPJLQ9UBG7 517 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 ZC3H7BQ9UGR2 993 aaKnown RBP4.28□□□□□ -1.72
UBE4A-201ENST00000252108 PNMA3Q9UL41 463 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 G3BP2Q9UN86 482 aaKnown RBP4.28□□□□□ -1.72
UBE4A-201ENST00000252108 NR2E3Q9Y5X4 410 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 GMEB1Q9Y692 573 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 H3BRJ5 948 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 APOL1O14791 398 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 HSPA4LO95757 839 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 CCDC166P0CW27 439 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 TGFB3P10600 412 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 KRT3P12035 628 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 MYCLP12524 364 aaPredicted RBP4.28□□□□□ -1.72
UBE4A-201ENST00000252108 ARL4AP40617 200 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 GPD2P43304 727 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 RANBP1P43487 201 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 TMED1Q13445 227 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 KCNJ11Q14654 390 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 PKN2Q16513 984 aaKnown RBP4.28□□□□□ -1.72
UBE4A-201ENST00000252108 CCDC153Q494R4 210 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 ZNF667Q5HYK9 610 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 LDLRAD1Q5T700 205 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 SPOPLQ6IQ16 392 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 CAPN12Q6ZSI9 719 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 BBS12Q6ZW61 710 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 TCP10LQ8TDR4 215 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 SLC26A7Q8TE54 656 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 PBXIP1Q96AQ6 731 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 SLC7A6OSQ96CW6 309 aaPredicted RBP4.28□□□□□ -1.72
UBE4A-201ENST00000252108 TEX13BQ9BXU2 312 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 FHDC1Q9C0D6 1143 aaPredicted RBP4.28□□□□□ -1.72
UBE4A-201ENST00000252108 RBAKQ9NYW8 714 aaPredicted RBP4.28□□□□□ -1.72
UBE4A-201ENST00000252108 PTTG2Q9NZH5 202 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 GABBR1Q9UBS5 961 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 SEPT3Q9UH03 358 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 MAD1L1Q9Y6D9 718 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 TRIP12Q14669 1992 aaPredicted RBP4.28□□□□□ -1.72
UBE4A-201ENST00000252108 H3BNX3 289 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 MTSS1O43312 755 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 LRCH4O75427 683 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 ANPEPP15144 967 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 GNAZP19086 355 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 CD58P19256 250 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 GSTT1P30711 240 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 CCNFP41002 786 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 MAGEA12P43365 314 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 ADCY1Q08828 1119 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 IRF5Q13568 498 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 INSCQ1MX18 579 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 PTPN20Q4JDL3 420 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 RABGAP1LQ5R372 815 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 METTL21CQ5VZV1 264 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 MICALL2Q8IY33 904 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 SLC4A11Q8NBS3 891 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 NSUN6Q8TEA1 469 aaKnown RBP4.28□□□□□ -1.72
UBE4A-201ENST00000252108 DCAKDQ8WVC6 231 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 DGCR14Q96DF8 476 aaKnown RBP4.28□□□□□ -1.72
UBE4A-201ENST00000252108 FAM213AQ9BRX8 229 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 PI4K2AQ9BTU6 479 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms