RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 PIWIL1Q96J94 861 aaKnown RBP16.02■□□□□ 0.15
DDX55-201ENST00000238146 BCO2Q9BYV7 579 aa16.02■□□□□ 0.15
DDX55-201ENST00000238146 MOCS1Q9NZB8 636 aa16.02■□□□□ 0.15
DDX55-201ENST00000238146 PCDHA11Q9Y5I1 949 aa16.02■□□□□ 0.15
DDX55-201ENST00000238146 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.01■□□□□ 0.15
DDX55-201ENST00000238146 M0QYV0 167 aa16.01■□□□□ 0.15
DDX55-201ENST00000238146 PIK3R2O00459 728 aa16.01■□□□□ 0.15
DDX55-201ENST00000238146 APOL1O14791 398 aa16.01■□□□□ 0.15
DDX55-201ENST00000238146 TNNC2P02585 160 aa16.01■□□□□ 0.15
DDX55-201ENST00000238146 ALDOAP04075 364 aaKnown RBP16.01■□□□□ 0.15
DDX55-201ENST00000238146 KRT19P08727 400 aa16.01■□□□□ 0.15
DDX55-201ENST00000238146 VAV1P15498 845 aa16.01■□□□□ 0.15
DDX55-201ENST00000238146 ITGAXP20702 1163 aa16.01■□□□□ 0.15
DDX55-201ENST00000238146 TGM2P21980 687 aa16.01■□□□□ 0.15
DDX55-201ENST00000238146 YY1P25490 414 aa16.01■□□□□ 0.15
DDX55-201ENST00000238146 ADORA2AP29274 412 aa16.01■□□□□ 0.15
DDX55-201ENST00000238146 OSTNP61366 133 aa16.01■□□□□ 0.15
DDX55-201ENST00000238146 TARBP2Q15633 366 aaKnown RBP16.01■□□□□ 0.15
DDX55-201ENST00000238146 ANKRD20A4Q4UJ75 823 aa16.01■□□□□ 0.15
DDX55-201ENST00000238146 TCHHL1Q5QJ38 904 aaPredicted RBP16.01■□□□□ 0.15
DDX55-201ENST00000238146 SPATA24Q86W54 205 aa16.01■□□□□ 0.15
DDX55-201ENST00000238146 MAP7D3Q8IWC1 876 aa16.01■□□□□ 0.15
DDX55-201ENST00000238146 SORT1Q99523 831 aa16.01■□□□□ 0.15
DDX55-201ENST00000238146 ELOVL4Q9GZR5 314 aa16.01■□□□□ 0.15
DDX55-201ENST00000238146 MIS12Q9H081 205 aa16.01■□□□□ 0.15
DDX55-201ENST00000238146 SF3B1O75533 1304 aaKnown RBP eCLIP16.01■□□□□ 0.153e-6■■■■■ 88.4
DDX55-201ENST00000238146 LOC100653049A0A140TA62 436 aa16.01■□□□□ 0.15
DDX55-201ENST00000238146 SMIM31A0A1B0GVY4 71 aa16.01■□□□□ 0.15
DDX55-201ENST00000238146 H3BNX3 289 aa16.01■□□□□ 0.15
DDX55-201ENST00000238146 PDLIM1O00151 329 aa16.01■□□□□ 0.15
DDX55-201ENST00000238146 CASQ2O14958 399 aaPredicted RBP16.01■□□□□ 0.15
DDX55-201ENST00000238146 PLIN3O60664 434 aa16.01■□□□□ 0.15
DDX55-201ENST00000238146 KRT34O76011 436 aa16.01■□□□□ 0.15
DDX55-201ENST00000238146 ARRB2P32121 409 aa16.01■□□□□ 0.15
DDX55-201ENST00000238146 CHN2P52757 468 aa16.01■□□□□ 0.15
DDX55-201ENST00000238146 PEX6Q13608 980 aa16.01■□□□□ 0.15
DDX55-201ENST00000238146 PCLAFQ15004 111 aa16.01■□□□□ 0.15
DDX55-201ENST00000238146 ZNF667Q5HYK9 610 aa16.01■□□□□ 0.15
DDX55-201ENST00000238146 SDCCAG8Q86SQ7 713 aaPredicted RBP16.01■□□□□ 0.15
DDX55-201ENST00000238146 REPS2Q8NFH8 660 aa16.01■□□□□ 0.15
DDX55-201ENST00000238146 TFB1MQ8WVM0 346 aaKnown RBP16.01■□□□□ 0.15
DDX55-201ENST00000238146 AKT1S1Q96B36 256 aa16.01■□□□□ 0.15
DDX55-201ENST00000238146 NRDE2Q9H7Z3 1164 aa16.01■□□□□ 0.15
DDX55-201ENST00000238146 SLC17A6Q9P2U8 582 aa16.01■□□□□ 0.15
DDX55-201ENST00000238146 TXNDC9O14530 226 aa16■□□□□ 0.15
DDX55-201ENST00000238146 ZNF195O14628 629 aa16■□□□□ 0.15
DDX55-201ENST00000238146 CREB3O43889 395 aa16■□□□□ 0.15
DDX55-201ENST00000238146 GRAP2O75791 330 aa16■□□□□ 0.15
DDX55-201ENST00000238146 PYGLP06737 847 aa16■□□□□ 0.15
DDX55-201ENST00000238146 EFNA5P52803 228 aa16■□□□□ 0.15
DDX55-201ENST00000238146 PDE1CQ14123 709 aaPredicted RBP16■□□□□ 0.15
DDX55-201ENST00000238146 PDK2Q15119 407 aa16■□□□□ 0.15
DDX55-201ENST00000238146 VWA5B1Q5TIE3 1220 aa16■□□□□ 0.15
DDX55-201ENST00000238146 PDPK2PQ6A1A2 396 aa16■□□□□ 0.15
DDX55-201ENST00000238146 SLC9A4Q6AI14 798 aa16■□□□□ 0.15
DDX55-201ENST00000238146 FRMD7Q6ZUT3 714 aa16■□□□□ 0.15
DDX55-201ENST00000238146 KBTBD6Q86V97 674 aa16■□□□□ 0.15
DDX55-201ENST00000238146 UBA3Q8TBC4 463 aa16■□□□□ 0.15
DDX55-201ENST00000238146 CMTM5Q96DZ9 223 aa16■□□□□ 0.15
DDX55-201ENST00000238146 ANKRD36BP1Q96IX9 119 aa16■□□□□ 0.15
DDX55-201ENST00000238146 NLRP4Q96MN2 994 aa16■□□□□ 0.15
DDX55-201ENST00000238146 DNAJC28Q9NX36 388 aa16■□□□□ 0.15
DDX55-201ENST00000238146 CLIC5Q9NZA1 410 aa16■□□□□ 0.15
DDX55-201ENST00000238146 ATXN10Q9UBB4 475 aa16■□□□□ 0.15
DDX55-201ENST00000238146 AP1G1O43747 822 aa16■□□□□ 0.15
DDX55-201ENST00000238146 PEX1O43933 1283 aa16■□□□□ 0.15
DDX55-201ENST00000238146 SERPINE1P05121 402 aa16■□□□□ 0.15
DDX55-201ENST00000238146 CNTFP26441 200 aa16■□□□□ 0.15
DDX55-201ENST00000238146 RPL26P61254 145 aaKnown RBP16■□□□□ 0.15
DDX55-201ENST00000238146 FOLH1Q04609 750 aa16■□□□□ 0.15
DDX55-201ENST00000238146 SCYL2Q6P3W7 929 aa16■□□□□ 0.15
DDX55-201ENST00000238146 C10orf107Q8IVU9 208 aa16■□□□□ 0.15
DDX55-201ENST00000238146 PHTF2Q8N3S3 785 aa16■□□□□ 0.15
DDX55-201ENST00000238146 FBXW8Q8N3Y1 598 aa16■□□□□ 0.15
DDX55-201ENST00000238146 BTBD9Q96Q07 612 aa16■□□□□ 0.15
DDX55-201ENST00000238146 PCYT2Q99447 389 aa16■□□□□ 0.15
DDX55-201ENST00000238146 EPB41L1Q9H4G0 881 aa16■□□□□ 0.15
DDX55-201ENST00000238146 PCDH18Q9HCL0 1135 aa16■□□□□ 0.15
DDX55-201ENST00000238146 IRAK4Q9NWZ3 460 aa16■□□□□ 0.15
DDX55-201ENST00000238146 SIX4Q9UIU6 781 aa16■□□□□ 0.15
DDX55-201ENST00000238146 WNT10BO00744 389 aa15.99■□□□□ 0.15
DDX55-201ENST00000238146 TPP1O14773 563 aa15.99■□□□□ 0.15
DDX55-201ENST00000238146 B4GALT4O60513 344 aa15.99■□□□□ 0.15
DDX55-201ENST00000238146 GLRA3O75311 464 aa15.99■□□□□ 0.15
DDX55-201ENST00000238146 STK10O94804 968 aaKnown RBP15.99■□□□□ 0.15
DDX55-201ENST00000238146 PGM3O95394 542 aa15.99■□□□□ 0.15
DDX55-201ENST00000238146 PRKCGP05129 697 aa15.99■□□□□ 0.15
DDX55-201ENST00000238146 SRGAP2CP0DJJ0 459 aa15.99■□□□□ 0.15
DDX55-201ENST00000238146 MYL4P12829 197 aa15.99■□□□□ 0.15
DDX55-201ENST00000238146 TBL3Q12788 808 aaKnown RBP15.99■□□□□ 0.15
DDX55-201ENST00000238146 CA9Q16790 459 aa15.99■□□□□ 0.15
DDX55-201ENST00000238146 GRAMD1BQ3KR37 738 aa15.99■□□□□ 0.15
DDX55-201ENST00000238146 RTKN2Q8IZC4 609 aa15.99■□□□□ 0.15
DDX55-201ENST00000238146 MTMR14Q8NCE2 650 aa15.99■□□□□ 0.15
DDX55-201ENST00000238146 ACMSDQ8TDX5 336 aa15.99■□□□□ 0.15
DDX55-201ENST00000238146 NMD3Q96D46 503 aaKnown RBP15.99■□□□□ 0.15
DDX55-201ENST00000238146 ZNF214Q9UL59 606 aaPredicted RBP15.99■□□□□ 0.15
DDX55-201ENST00000238146 IGKV6D-21A0A0A0MT36 114 aa15.99■□□□□ 0.15
DDX55-201ENST00000238146 C15orf38-AP3S2A0A0A6YYH1 394 aa15.99■□□□□ 0.15
DDX55-201ENST00000238146 ZMPSTE24O75844 475 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms