RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 UPP2O95045 317 aa15.42■□□□□ 0.06
CCDC47-201ENST00000225726 GOLGA6DP0CG33 693 aa15.42■□□□□ 0.06
CCDC47-201ENST00000225726 AMPD1P23109 780 aa15.42■□□□□ 0.06
CCDC47-201ENST00000225726 LRRC26Q2I0M4 334 aa15.42■□□□□ 0.06
CCDC47-201ENST00000225726 RELL1Q8IUW5 271 aa15.42■□□□□ 0.06
CCDC47-201ENST00000225726 DQX1Q8TE96 717 aaKnown RBP15.42■□□□□ 0.06
CCDC47-201ENST00000225726 BCL7CQ8WUZ0 217 aaPredicted RBP15.42■□□□□ 0.06
CCDC47-201ENST00000225726 TTPALQ9BTX7 342 aa15.42■□□□□ 0.06
CCDC47-201ENST00000225726 CDC42EP4Q9H3Q1 356 aaKnown RBP15.42■□□□□ 0.06
CCDC47-201ENST00000225726 ARHGEF4Q9NR80 690 aa15.42■□□□□ 0.06
CCDC47-201ENST00000225726 TMPRSS4Q9NRS4 437 aa15.42■□□□□ 0.06
CCDC47-201ENST00000225726 GOLGA6AQ9NYA3 693 aa15.42■□□□□ 0.06
CCDC47-201ENST00000225726 MYZAPP0CAP1 466 aa15.42■□□□□ 0.06
CCDC47-201ENST00000225726 HSPA8P11142 646 aaKnown RBP15.42■□□□□ 0.06
CCDC47-201ENST00000225726 IFFO1Q0D2I5 559 aa15.42■□□□□ 0.06
CCDC47-201ENST00000225726 BTBD8Q5XKL5 378 aa15.42■□□□□ 0.06
CCDC47-201ENST00000225726 PPIL6Q8IXY8 311 aa15.42■□□□□ 0.06
CCDC47-201ENST00000225726 NUP93Q8N1F7 819 aa15.42■□□□□ 0.06
CCDC47-201ENST00000225726 USP29Q9HBJ7 922 aa15.42■□□□□ 0.06
CCDC47-201ENST00000225726 SCML2Q9UQR0 700 aa15.42■□□□□ 0.06
CCDC47-201ENST00000225726 COL4A6Q14031 1691 aa15.42■□□□□ 0.06
CCDC47-201ENST00000225726 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.42■□□□□ 0.06
CCDC47-201ENST00000225726 IGLV3-25P01717 112 aa15.42■□□□□ 0.06
CCDC47-201ENST00000225726 PBX3P40426 434 aa15.42■□□□□ 0.06
CCDC47-201ENST00000225726 CTCFP49711 727 aaPredicted RBP15.42■□□□□ 0.06
CCDC47-201ENST00000225726 RTP2Q5QGT7 225 aa15.42■□□□□ 0.06
CCDC47-201ENST00000225726 HOOK3Q86VS8 718 aa15.42■□□□□ 0.06
CCDC47-201ENST00000225726 TMEM173Q86WV6 379 aaPredicted RBP15.42■□□□□ 0.06
CCDC47-201ENST00000225726 PAWRQ96IZ0 340 aaKnown RBP15.42■□□□□ 0.06
CCDC47-201ENST00000225726 FBXO44Q9H4M3 255 aa15.42■□□□□ 0.06
CCDC47-201ENST00000225726 CWH43Q9H720 699 aa15.42■□□□□ 0.06
CCDC47-201ENST00000225726 FARP1Q9Y4F1 1045 aaPredicted RBP15.42■□□□□ 0.06
CCDC47-201ENST00000225726 ABHD14A-ACY1A0A1B0GW23 586 aa15.41■□□□□ 0.06
CCDC47-201ENST00000225726 SMAPO00193 183 aa15.41■□□□□ 0.06
CCDC47-201ENST00000225726 EEF2KO00418 725 aaKnown RBP15.41■□□□□ 0.06
CCDC47-201ENST00000225726 CPB1P15086 417 aa15.41■□□□□ 0.06
CCDC47-201ENST00000225726 ZNF135P52742 658 aaPredicted RBP15.41■□□□□ 0.06
CCDC47-201ENST00000225726 IFRD2Q12894 506 aaPredicted RBP15.41■□□□□ 0.06
CCDC47-201ENST00000225726 GPR17Q13304 367 aa15.41■□□□□ 0.06
CCDC47-201ENST00000225726 SLC29A2Q14542 456 aa15.41■□□□□ 0.06
CCDC47-201ENST00000225726 BZW1Q7L1Q6 419 aaKnown RBP15.41■□□□□ 0.06
CCDC47-201ENST00000225726 SPPL2BQ8TCT7 592 aa15.41■□□□□ 0.06
CCDC47-201ENST00000225726 C2orf15Q8WU43 125 aaKnown RBP15.41■□□□□ 0.06
CCDC47-201ENST00000225726 PRCCQ92733 491 aaPredicted RBP15.41■□□□□ 0.06
CCDC47-201ENST00000225726 WDCPQ9H6R7 721 aa15.41■□□□□ 0.06
CCDC47-201ENST00000225726 EFEMP2O95967 443 aa15.41■□□□□ 0.06
CCDC47-201ENST00000225726 HCAR3P49019 387 aa15.41■□□□□ 0.06
CCDC47-201ENST00000225726 ALDH7A1P49419 539 aaKnown RBP15.41■□□□□ 0.06
CCDC47-201ENST00000225726 GTF2A1P52655 376 aaPredicted RBP15.41■□□□□ 0.06
CCDC47-201ENST00000225726 GBE1Q04446 702 aa15.41■□□□□ 0.06
CCDC47-201ENST00000225726 SEMA3BQ13214 749 aa15.41■□□□□ 0.06
CCDC47-201ENST00000225726 DPYSQ14117 519 aa15.41■□□□□ 0.06
CCDC47-201ENST00000225726 SCD5Q86SK9 330 aa15.41■□□□□ 0.06
CCDC47-201ENST00000225726 PGLYRP2Q96PD5 576 aa15.41■□□□□ 0.06
CCDC47-201ENST00000225726 QKIQ96PU8 341 aaKnown RBP eCLIP15.41■□□□□ 0.061e-9■■■■■ 189.5
CCDC47-201ENST00000225726 MTMR11A4FU01 709 aa15.41■□□□□ 0.06
CCDC47-201ENST00000225726 KCNN4O15554 427 aa15.41■□□□□ 0.06
CCDC47-201ENST00000225726 CREB3O43889 395 aa15.41■□□□□ 0.06
CCDC47-201ENST00000225726 GPR15P49685 360 aa15.41■□□□□ 0.06
CCDC47-201ENST00000225726 SLC10A2Q12908 348 aaPredicted RBP15.41■□□□□ 0.06
CCDC47-201ENST00000225726 DDR2Q16832 855 aa15.41■□□□□ 0.06
CCDC47-201ENST00000225726 SLC45A4Q5BKX6 768 aa15.41■□□□□ 0.06
CCDC47-201ENST00000225726 RFX8Q6ZV50 586 aa15.41■□□□□ 0.06
CCDC47-201ENST00000225726 TAS1R1Q7RTX1 841 aa15.41■□□□□ 0.06
CCDC47-201ENST00000225726 ARHGAP18Q8N392 663 aa15.41■□□□□ 0.06
CCDC47-201ENST00000225726 FAM76AQ8TAV0 307 aa15.41■□□□□ 0.06
CCDC47-201ENST00000225726 ATP6V1G3Q96LB4 118 aa15.41■□□□□ 0.06
CCDC47-201ENST00000225726 ANLNQ9NQW6 1124 aa15.41■□□□□ 0.06
CCDC47-201ENST00000225726 ETNK2Q9NVF9 386 aa15.41■□□□□ 0.06
CCDC47-201ENST00000225726 PAK5Q9P286 719 aa15.41■□□□□ 0.06
CCDC47-201ENST00000225726 CEP350Q5VT06 3117 aa15.4■□□□□ 0.06
CCDC47-201ENST00000225726 HACD1B0YJ81 288 aa15.4■□□□□ 0.06
CCDC47-201ENST00000225726 HMGB1P1B2RPK0 211 aaPredicted RBP15.4■□□□□ 0.06
CCDC47-201ENST00000225726 TIMP1P01033 207 aa15.4■□□□□ 0.06
CCDC47-201ENST00000225726 RBL1P28749 1068 aa15.4■□□□□ 0.06
CCDC47-201ENST00000225726 ARPP19P56211 112 aa15.4■□□□□ 0.06
CCDC47-201ENST00000225726 B4GALNT4Q76KP1 1039 aa15.4■□□□□ 0.06
CCDC47-201ENST00000225726 CPT1BQ92523 772 aa15.4■□□□□ 0.06
CCDC47-201ENST00000225726 PWWP2AQ96N64 755 aa15.4■□□□□ 0.06
CCDC47-201ENST00000225726 SMOC2Q9H3U7 446 aa15.4■□□□□ 0.06
CCDC47-201ENST00000225726 IL37Q9NZH6 218 aa15.4■□□□□ 0.06
CCDC47-201ENST00000225726 DTLQ9NZJ0 730 aa15.4■□□□□ 0.06
CCDC47-201ENST00000225726 ADAM21Q9UKJ8 722 aa15.4■□□□□ 0.06
CCDC47-201ENST00000225726 SHBGP04278 402 aa15.4■□□□□ 0.06
CCDC47-201ENST00000225726 ACTN2P35609 894 aa15.4■□□□□ 0.06
CCDC47-201ENST00000225726 EIF4EBP2Q13542 120 aaPredicted RBP15.4■□□□□ 0.06
CCDC47-201ENST00000225726 AGBL2Q5U5Z8 902 aa15.4■□□□□ 0.06
CCDC47-201ENST00000225726 C4orf22Q6V702 233 aa15.4■□□□□ 0.06
CCDC47-201ENST00000225726 CROCCP2Q86T23 111 aa15.4■□□□□ 0.06
CCDC47-201ENST00000225726 MON1AQ86VX9 555 aa15.4■□□□□ 0.06
CCDC47-201ENST00000225726 ATAD1Q8NBU5 361 aa15.4■□□□□ 0.06
CCDC47-201ENST00000225726 TOP1MTQ969P6 601 aa15.4■□□□□ 0.06
CCDC47-201ENST00000225726 OLFM3Q96PB7 478 aa15.4■□□□□ 0.06
CCDC47-201ENST00000225726 RBM15Q96T37 977 aaKnown RBP eCLIP15.4■□□□□ 0.06
CCDC47-201ENST00000225726 TMEM109Q9BVC6 243 aa15.4■□□□□ 0.06
CCDC47-201ENST00000225726 PHACTR1Q9C0D0 580 aa15.4■□□□□ 0.06
CCDC47-201ENST00000225726 DNAJC17Q9NVM6 304 aaKnown RBP15.4■□□□□ 0.06
CCDC47-201ENST00000225726 A0A1W2PQH9 124 aa15.4■□□□□ 0.06
CCDC47-201ENST00000225726 IRAK2O43187 625 aa15.4■□□□□ 0.06
CCDC47-201ENST00000225726 TTC4O95801 387 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms