RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 Q6ZNB5 142 aa24.6■■□□□ 1.53
HOMER3-201ENST00000221222 H2AFVQ71UI9 128 aa24.6■■□□□ 1.53
HOMER3-201ENST00000221222 BNIPLQ7Z465 357 aa24.6■■□□□ 1.53
HOMER3-201ENST00000221222 BMP8AQ7Z5Y6 402 aa24.6■■□□□ 1.53
HOMER3-201ENST00000221222 SUGP1Q8IWZ8 645 aaKnown RBP24.6■■□□□ 1.53
HOMER3-201ENST00000221222 OSCP1Q8WVF1 389 aa24.6■■□□□ 1.53
HOMER3-201ENST00000221222 RXFP2Q8WXD0 754 aa24.6■■□□□ 1.53
HOMER3-201ENST00000221222 SLC39A13Q96H72 371 aa24.6■■□□□ 1.53
HOMER3-201ENST00000221222 MCEEQ96PE7 176 aa24.6■■□□□ 1.53
HOMER3-201ENST00000221222 FAM83CQ9BQN1 747 aa24.6■■□□□ 1.53
HOMER3-201ENST00000221222 DCLK3Q9C098 648 aa24.6■■□□□ 1.53
HOMER3-201ENST00000221222 FAM204AQ9H8W3 233 aa24.6■■□□□ 1.53
HOMER3-201ENST00000221222 MRPL47Q9HD33 250 aaKnown RBP24.6■■□□□ 1.53
HOMER3-201ENST00000221222 TMEM51Q9NW97 253 aa24.6■■□□□ 1.53
HOMER3-201ENST00000221222 LSM7Q9UK45 103 aaKnown RBP24.6■■□□□ 1.53
HOMER3-201ENST00000221222 DUSP12Q9UNI6 340 aa24.6■■□□□ 1.53
HOMER3-201ENST00000221222 EIF3CLB5ME19 914 aaKnown RBP24.59■■□□□ 1.53
HOMER3-201ENST00000221222 COL4A2P08572 1712 aa24.59■■□□□ 1.53
HOMER3-201ENST00000221222 SRFP11831 508 aa24.59■■□□□ 1.53
HOMER3-201ENST00000221222 PDGFRAP16234 1089 aa24.59■■□□□ 1.53
HOMER3-201ENST00000221222 GDI1P31150 447 aa24.59■■□□□ 1.53
HOMER3-201ENST00000221222 GBP1P32455 592 aa24.59■■□□□ 1.53
HOMER3-201ENST00000221222 PTPN9P43378 593 aa24.59■■□□□ 1.53
HOMER3-201ENST00000221222 TBX4P57082 545 aa24.59■■□□□ 1.53
HOMER3-201ENST00000221222 RPL7AP62424 266 aaKnown RBP24.59■■□□□ 1.53
HOMER3-201ENST00000221222 IER5LQ5T953 404 aa24.59■■□□□ 1.53
HOMER3-201ENST00000221222 DCUN1D2Q6PH85 259 aa24.59■■□□□ 1.53
HOMER3-201ENST00000221222 TTC16Q8NEE8 873 aa24.59■■□□□ 1.53
HOMER3-201ENST00000221222 FCRL2Q96LA5 508 aaPredicted RBP24.59■■□□□ 1.53
HOMER3-201ENST00000221222 CFAP57Q96MR6 1250 aa24.59■■□□□ 1.53
HOMER3-201ENST00000221222 EIF3CQ99613 913 aaKnown RBP24.59■■□□□ 1.53
HOMER3-201ENST00000221222 TRPV5Q9NQA5 729 aa24.59■■□□□ 1.53
HOMER3-201ENST00000221222 SLC2A4RGQ9NR83 387 aa24.59■■□□□ 1.53
HOMER3-201ENST00000221222 DDIT4Q9NX09 232 aa24.59■■□□□ 1.53
HOMER3-201ENST00000221222 TBC1D14Q9P2M4 693 aa24.59■■□□□ 1.53
HOMER3-201ENST00000221222 EPN1Q9Y6I3 576 aaPredicted RBP24.59■■□□□ 1.53
HOMER3-201ENST00000221222 M0QYT0 321 aa24.58■■□□□ 1.53
HOMER3-201ENST00000221222 ARNTLO00327 626 aa24.58■■□□□ 1.53
HOMER3-201ENST00000221222 SLC9A3R1O14745 358 aaPredicted RBP24.58■■□□□ 1.53
HOMER3-201ENST00000221222 ENDOD1O94919 500 aa24.58■■□□□ 1.53
HOMER3-201ENST00000221222 NDUFA10O95299 355 aa24.58■■□□□ 1.53
HOMER3-201ENST00000221222 F9P00740 461 aa24.58■■□□□ 1.53
HOMER3-201ENST00000221222 KLKB1P03952 638 aa24.58■■□□□ 1.53
HOMER3-201ENST00000221222 HMBSP08397 361 aa24.58■■□□□ 1.53
HOMER3-201ENST00000221222 TMEM253P0C7T8 217 aa24.58■■□□□ 1.53
HOMER3-201ENST00000221222 TFE3P19532 575 aaPredicted RBP24.58■■□□□ 1.53
HOMER3-201ENST00000221222 GPD1P21695 349 aa24.58■■□□□ 1.53
HOMER3-201ENST00000221222 SDC4P31431 198 aa24.58■■□□□ 1.53
HOMER3-201ENST00000221222 SULT1E1P49888 294 aa24.58■■□□□ 1.53
HOMER3-201ENST00000221222 PDGFRLQ15198 375 aa24.58■■□□□ 1.53
HOMER3-201ENST00000221222 CCDC14Q49A88 953 aa24.58■■□□□ 1.53
HOMER3-201ENST00000221222 NUGGCQ68CJ6 796 aa24.58■■□□□ 1.53
HOMER3-201ENST00000221222 RAD9BQ6WBX8 426 aa24.58■■□□□ 1.53
HOMER3-201ENST00000221222 UNC45BQ8IWX7 931 aa24.58■■□□□ 1.53
HOMER3-201ENST00000221222 FBXL6Q8N531 539 aa24.58■■□□□ 1.53
HOMER3-201ENST00000221222 IRF7Q92985 503 aa24.58■■□□□ 1.53
HOMER3-201ENST00000221222 OTUB2Q96DC9 234 aa24.58■■□□□ 1.53
HOMER3-201ENST00000221222 ASIC4Q96FT7 647 aa24.58■■□□□ 1.53
HOMER3-201ENST00000221222 PDLIM2Q96JY6 352 aa24.58■■□□□ 1.53
HOMER3-201ENST00000221222 TBCBQ99426 244 aa24.58■■□□□ 1.53
HOMER3-201ENST00000221222 PACSIN1Q9BY11 444 aa24.58■■□□□ 1.53
HOMER3-201ENST00000221222 ADAM33Q9BZ11 813 aa24.58■■□□□ 1.53
HOMER3-201ENST00000221222 BRD9Q9H8M2 597 aa24.58■■□□□ 1.53
HOMER3-201ENST00000221222 CALCOCO1Q9P1Z2 691 aa24.58■■□□□ 1.53
HOMER3-201ENST00000221222 MYO1AQ9UBC5 1043 aa24.58■■□□□ 1.53
HOMER3-201ENST00000221222 INTUQ9ULD6 942 aa24.58■■□□□ 1.53
HOMER3-201ENST00000221222 ZNF510Q9Y2H8 683 aa24.58■■□□□ 1.53
HOMER3-201ENST00000221222 TICRRQ7Z2Z1 1910 aa24.58■■□□□ 1.53
HOMER3-201ENST00000221222 TMEM191CA6NGB0 347 aa24.57■■□□□ 1.52
HOMER3-201ENST00000221222 NARSO43776 548 aaKnown RBP24.57■■□□□ 1.52
HOMER3-201ENST00000221222 CORO1AP31146 461 aaKnown RBP24.57■■□□□ 1.52
HOMER3-201ENST00000221222 HARS2P49590 506 aaKnown RBP24.57■■□□□ 1.52
HOMER3-201ENST00000221222 ZNF143P52747 638 aaPredicted RBP24.57■■□□□ 1.52
HOMER3-201ENST00000221222 UBALD2Q8IYN6 164 aa24.57■■□□□ 1.52
HOMER3-201ENST00000221222 CTNNBL1Q8WYA6 563 aaPredicted RBP24.57■■□□□ 1.52
HOMER3-201ENST00000221222 CENPIQ92674 756 aaPredicted RBP24.57■■□□□ 1.52
HOMER3-201ENST00000221222 ARHGEF26Q96DR7 871 aa24.57■■□□□ 1.52
HOMER3-201ENST00000221222 ZFYVE19Q96K21 471 aa24.57■■□□□ 1.52
HOMER3-201ENST00000221222 DUS2Q9NX74 493 aaKnown RBP24.57■■□□□ 1.52
HOMER3-201ENST00000221222 WNT6Q9Y6F9 365 aa24.57■■□□□ 1.52
HOMER3-201ENST00000221222 KMT2EQ8IZD2 1858 aa24.57■■□□□ 1.52
HOMER3-201ENST00000221222 LATS1O95835 1130 aa24.56■■□□□ 1.52
HOMER3-201ENST00000221222 PDGFBP01127 241 aaPredicted RBP24.56■■□□□ 1.52
HOMER3-201ENST00000221222 IFNAR2P48551 515 aa24.56■■□□□ 1.52
HOMER3-201ENST00000221222 SPA17Q15506 151 aa24.56■■□□□ 1.52
HOMER3-201ENST00000221222 EML3Q32P44 896 aa24.56■■□□□ 1.52
HOMER3-201ENST00000221222 BBS7Q8IWZ6 715 aa24.56■■□□□ 1.52
HOMER3-201ENST00000221222 CCDC112Q8NEF3 446 aa24.56■■□□□ 1.52
HOMER3-201ENST00000221222 PRSS33Q8NF86 280 aa24.56■■□□□ 1.52
HOMER3-201ENST00000221222 FNIP1Q8TF40 1166 aa24.56■■□□□ 1.52
HOMER3-201ENST00000221222 DNASE1L2Q92874 299 aa24.56■■□□□ 1.52
HOMER3-201ENST00000221222 AZIN2Q96A70 460 aa24.56■■□□□ 1.52
HOMER3-201ENST00000221222 KCNH6Q9H252 994 aa24.56■■□□□ 1.52
HOMER3-201ENST00000221222 PIGVQ9NUD9 493 aa24.56■■□□□ 1.52
HOMER3-201ENST00000221222 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.56■■□□□ 1.52
HOMER3-201ENST00000221222 SCAMP3O14828 347 aaKnown RBP24.55■■□□□ 1.52
HOMER3-201ENST00000221222 SLC2A3P11169 496 aa24.55■■□□□ 1.52
HOMER3-201ENST00000221222 VCPP55072 806 aaKnown RBP24.55■■□□□ 1.52
HOMER3-201ENST00000221222 PFKPQ01813 784 aa24.55■■□□□ 1.52
HOMER3-201ENST00000221222 NME3Q13232 169 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms