RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 BRCA1P38398 1863 aaKnown RBP13.75□□□□□ -0.21
SRP54-201ENST00000216774 A0A087WZ62 844 aa13.74□□□□□ -0.21
SRP54-201ENST00000216774 A6NJR5 290 aa13.74□□□□□ -0.21
SRP54-201ENST00000216774 PAPSS1O43252 624 aaPredicted RBP13.74□□□□□ -0.21
SRP54-201ENST00000216774 MAP3K6O95382 1288 aa13.74□□□□□ -0.21
SRP54-201ENST00000216774 PGK2P07205 417 aa13.74□□□□□ -0.21
SRP54-201ENST00000216774 ACTR3P61158 418 aa13.74□□□□□ -0.21
SRP54-201ENST00000216774 GBE1Q04446 702 aa13.74□□□□□ -0.21
SRP54-201ENST00000216774 RCN2Q14257 317 aa13.74□□□□□ -0.21
SRP54-201ENST00000216774 NBPF20Q3BBV1 942 aa13.74□□□□□ -0.21
SRP54-201ENST00000216774 MARK2Q7KZI7 788 aaKnown RBP13.74□□□□□ -0.21
SRP54-201ENST00000216774 SCUBE3Q8IX30 993 aa13.74□□□□□ -0.21
SRP54-201ENST00000216774 ULK2Q8IYT8 1036 aa13.74□□□□□ -0.21
SRP54-201ENST00000216774 ADGRF2Q8IZF7 708 aa13.74□□□□□ -0.21
SRP54-201ENST00000216774 LINC01465Q8N7H1 131 aa13.74□□□□□ -0.21
SRP54-201ENST00000216774 DTX3LQ8TDB6 740 aa13.74□□□□□ -0.21
SRP54-201ENST00000216774 CENPIQ92674 756 aaPredicted RBP13.74□□□□□ -0.21
SRP54-201ENST00000216774 ZNF184Q99676 751 aaPredicted RBP13.74□□□□□ -0.21
SRP54-201ENST00000216774 SYT15Q9BQS2 421 aa13.74□□□□□ -0.21
SRP54-201ENST00000216774 FDXACB1Q9BRP7 624 aaPredicted RBP13.74□□□□□ -0.21
SRP54-201ENST00000216774 C11orf84Q9BUA3 381 aaPredicted RBP13.74□□□□□ -0.21
SRP54-201ENST00000216774 C20orf27Q9GZN8 174 aa13.74□□□□□ -0.21
SRP54-201ENST00000216774 RNPEPQ9H4A4 650 aa13.74□□□□□ -0.21
SRP54-201ENST00000216774 ZNF395Q9H8N7 513 aaPredicted RBP13.74□□□□□ -0.21
SRP54-201ENST00000216774 SLC24A3Q9HC58 644 aa13.74□□□□□ -0.21
SRP54-201ENST00000216774 HESX1Q9UBX0 185 aa13.74□□□□□ -0.21
SRP54-201ENST00000216774 DNAJC25-GNG10A0A024R161 153 aa13.74□□□□□ -0.21
SRP54-201ENST00000216774 SDR42E2A6NKP2 422 aa13.74□□□□□ -0.21
SRP54-201ENST00000216774 EIF4E1BA6NMX2 242 aaKnown RBP13.74□□□□□ -0.21
SRP54-201ENST00000216774 PPP1R12AO14974 1030 aaPredicted RBP13.74□□□□□ -0.21
SRP54-201ENST00000216774 CSDE1O75534 798 aaKnown RBP13.74□□□□□ -0.21
SRP54-201ENST00000216774 CNMDO75829 334 aa13.74□□□□□ -0.21
SRP54-201ENST00000216774 TXNP10599 105 aaKnown RBP13.74□□□□□ -0.21
SRP54-201ENST00000216774 AMPD1P23109 780 aa13.74□□□□□ -0.21
SRP54-201ENST00000216774 SCNN1AP37088 669 aa13.74□□□□□ -0.21
SRP54-201ENST00000216774 MXRA7P84157 204 aa13.74□□□□□ -0.21
SRP54-201ENST00000216774 KDSRQ06136 332 aa13.74□□□□□ -0.21
SRP54-201ENST00000216774 SLC10A2Q12908 348 aaPredicted RBP13.74□□□□□ -0.21
SRP54-201ENST00000216774 NAB1Q13506 487 aa13.74□□□□□ -0.21
SRP54-201ENST00000216774 PRKG1Q13976 671 aa13.74□□□□□ -0.21
SRP54-201ENST00000216774 HEATR6Q6AI08 1181 aaKnown RBP13.74□□□□□ -0.21
SRP54-201ENST00000216774 KCNT2Q6UVM3 1135 aa13.74□□□□□ -0.21
SRP54-201ENST00000216774 WDR75Q8IWA0 830 aaKnown RBP13.74□□□□□ -0.21
SRP54-201ENST00000216774 FBXO16Q8IX29 292 aaPredicted RBP13.74□□□□□ -0.21
SRP54-201ENST00000216774 HACE1Q8IYU2 909 aa13.74□□□□□ -0.21
SRP54-201ENST00000216774 FBXO27Q8NI29 283 aa13.74□□□□□ -0.21
SRP54-201ENST00000216774 RILPQ96NA2 401 aa13.74□□□□□ -0.21
SRP54-201ENST00000216774 GPAMQ9HCL2 828 aa13.74□□□□□ -0.21
SRP54-201ENST00000216774 MORF4L1Q9UBU8 362 aa13.74□□□□□ -0.21
SRP54-201ENST00000216774 MARCOQ9UEW3 520 aaPredicted RBP13.74□□□□□ -0.21
SRP54-201ENST00000216774 SCOCQ9UIL1 159 aa13.74□□□□□ -0.21
SRP54-201ENST00000216774 HACD1B0YJ81 288 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 IRF6O14896 467 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 KITP10721 976 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 INSRRP14616 1297 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 SP100P23497 879 aaPredicted RBP13.73□□□□□ -0.21
SRP54-201ENST00000216774 FDFT1P37268 417 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 ALDH18A1P54886 795 aaKnown RBP13.73□□□□□ -0.21
SRP54-201ENST00000216774 GSTA3Q16772 222 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 FASTKD1Q53R41 847 aaKnown RBP13.73□□□□□ -0.21
SRP54-201ENST00000216774 FAM182AQ5T1J6 154 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 MBLAC2Q68D91 279 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 GADL1Q6ZQY3 521 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 RIPOR1Q6ZS17 1223 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 MYLK4Q86YV6 388 aaPredicted RBP13.73□□□□□ -0.21
SRP54-201ENST00000216774 CCNJLQ8IV13 435 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 COPS5Q92905 334 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 ATP2A3Q93084 1043 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 TRIM56Q9BRZ2 755 aaKnown RBP13.73□□□□□ -0.21
SRP54-201ENST00000216774 YIPF3Q9GZM5 350 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 KRT82Q9NSB4 513 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 DCAF8L1A6NGE4 600 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 PRR5-ARHGAP8B1AHC4 643 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 GLRA3O75311 464 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 GSRP00390 522 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 TUBP50607 506 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 AP2B1P63010 937 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 IGBP1P78318 339 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 ARHGAP8P85298 464 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 NIPAL4Q0D2K0 466 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 TTLL4Q14679 1199 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 SLC26A9Q7LBE3 791 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 ACOT1Q86TX2 421 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 PPP1R14CQ8TAE6 165 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 PIWIL2Q8TC59 973 aaKnown RBP13.73□□□□□ -0.21
SRP54-201ENST00000216774 UCMAQ8WVF2 138 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 CDKL2Q92772 493 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 KIF12Q96FN5 646 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 CSPG4P5Q96PW8 444 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 PANX3Q96QZ0 392 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 FAM96AQ9H5X1 160 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 DHX35Q9H5Z1 703 aaKnown RBP13.73□□□□□ -0.21
SRP54-201ENST00000216774 PRDM16Q9HAZ2 1276 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 EIF2B3Q9NR50 452 aaKnown RBP13.73□□□□□ -0.21
SRP54-201ENST00000216774 MTMR10Q9NXD2 777 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 DDX43Q9NXZ2 648 aaKnown RBP13.73□□□□□ -0.21
SRP54-201ENST00000216774 SLC7A8Q9UHI5 535 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 SOX13Q9UN79 622 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 AP4E1Q9UPM8 1137 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 AKT3Q9Y243 479 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms