RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 PPM1JQ5JR12 505 aa16.38■□□□□ 0.21
SNAPC1-201ENST00000216294 CASC4Q6P4E1 433 aa16.38■□□□□ 0.21
SNAPC1-201ENST00000216294 ZNF534Q76KX8 674 aa16.38■□□□□ 0.21
SNAPC1-201ENST00000216294 PYROXD2Q8N2H3 581 aa16.38■□□□□ 0.21
SNAPC1-201ENST00000216294 ZNF398Q8TD17 642 aa16.38■□□□□ 0.21
SNAPC1-201ENST00000216294 PYDC1Q8WXC3 89 aa16.38■□□□□ 0.21
SNAPC1-201ENST00000216294 CCDC124Q96CT7 223 aaKnown RBP16.38■□□□□ 0.21
SNAPC1-201ENST00000216294 RPF1Q9H9Y2 349 aaKnown RBP16.38■□□□□ 0.21
SNAPC1-201ENST00000216294 CYP4F11Q9HBI6 524 aa16.38■□□□□ 0.21
SNAPC1-201ENST00000216294 C2CD2Q9Y426 696 aa16.38■□□□□ 0.21
SNAPC1-201ENST00000216294 SCN4AP35499 1836 aa16.38■□□□□ 0.21
SNAPC1-201ENST00000216294 CAPN14A8MX76 684 aa16.38■□□□□ 0.21
SNAPC1-201ENST00000216294 CILPO75339 1184 aa16.38■□□□□ 0.21
SNAPC1-201ENST00000216294 ZNF143P52747 638 aaPredicted RBP16.38■□□□□ 0.21
SNAPC1-201ENST00000216294 EFNA5P52803 228 aa16.38■□□□□ 0.21
SNAPC1-201ENST00000216294 CCNA1P78396 465 aa16.38■□□□□ 0.21
SNAPC1-201ENST00000216294 EFCAB12Q6NXP0 572 aa16.38■□□□□ 0.21
SNAPC1-201ENST00000216294 SPNS2Q8IVW8 549 aa16.38■□□□□ 0.21
SNAPC1-201ENST00000216294 ZBTB8OSQ8IWT0 167 aa16.38■□□□□ 0.21
SNAPC1-201ENST00000216294 SNRNP25Q9BV90 132 aaKnown RBP16.38■□□□□ 0.21
SNAPC1-201ENST00000216294 LHX5Q9H2C1 402 aa16.38■□□□□ 0.21
SNAPC1-201ENST00000216294 PTPRHQ9HD43 1115 aa16.38■□□□□ 0.21
SNAPC1-201ENST00000216294 ASNSD1Q9NWL6 643 aa16.38■□□□□ 0.21
SNAPC1-201ENST00000216294 PSAT1Q9Y617 370 aa16.38■□□□□ 0.21
SNAPC1-201ENST00000216294 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 DNAJC6O75061 913 aa16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 GABBR2O75899 941 aa16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 PFKMP08237 780 aa16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 ZNF286BP0CG31 522 aa16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 ADCYAP1R1P41586 468 aa16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 MXD4Q14582 209 aaPredicted RBP16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 TEX44Q53QW1 395 aa16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 DENND5BQ6ZUT9 1274 aa16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 ACOT1Q86TX2 421 aa16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 ULK2Q8IYT8 1036 aa16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 FETUBQ9UGM5 382 aa16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 SYNJ2BP-COX16A0A087WUM0 186 aa16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 LOC100653049A0A140TA62 436 aa16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 WDR27A2RRH5 827 aa16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 E7ENQ6 273 aa16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 ADCY6O43306 1168 aa16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 MED7O43513 233 aa16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 KRT34O76011 436 aa16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 VTNP04004 478 aa16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 ARRB2P32121 409 aa16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 EPHB1P54762 984 aa16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 POLE2P56282 527 aa16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 OCRLQ01968 901 aa16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 PPP1R26Q5T8A7 1209 aaPredicted RBP16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 OR52E8Q6IFG1 317 aa16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 MAMDC4Q6UXC1 1216 aa16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 IZUMO2Q6UXV1 221 aa16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 SCUBE1Q8IWY4 988 aa16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 SMC1BQ8NDV3 1235 aa16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 PPP1R36Q96LQ0 422 aa16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 OXCT2Q9BYC2 517 aaPredicted RBP16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 BCO2Q9BYV7 579 aa16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 PCDH18Q9HCL0 1135 aa16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 COX16Q9P0S2 106 aa16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 PPME1Q9Y570 386 aa16.37■□□□□ 0.21
SNAPC1-201ENST00000216294 HBP1O60381 514 aa16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 AP1G2O75843 785 aa16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 KRT37O76014 449 aa16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 LGALS2P05162 132 aa16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 CHRM1P11229 460 aaPredicted RBP16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 SESN2P58004 480 aaPredicted RBP16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 PDE1BQ01064 536 aa16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 C1orf146Q5VVC0 180 aa16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 RAPH1Q70E73 1250 aa16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 TP53INP2Q8IXH6 220 aa16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 AFG1LQ8WV93 481 aa16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 HPDLQ96IR7 371 aa16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 TSC22D3Q99576 134 aa16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 GBA2Q9HCG7 927 aaPredicted RBP16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 PNPOQ9NVS9 261 aa16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 GINS2Q9Y248 185 aa16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 EFR3BQ9Y2G0 817 aa16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 NME7Q9Y5B8 376 aa16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 A0A087WZ62 844 aa16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 ARHGAP42A6NI28 874 aa16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 GAS2O43903 313 aaKnown RBP16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 APOEP02649 317 aa16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 STIP1P31948 543 aaKnown RBP16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 CACNA2D1P54289 1103 aa16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 GOLGA7BQ2TAP0 167 aa16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 EML3Q32P44 896 aa16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 PPP1R2P3Q6NXS1 205 aa16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 C7orf31Q8N865 590 aa16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 FNIP1Q8TF40 1166 aa16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 GTF3C2Q8WUA4 911 aaPredicted RBP16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 DEPDC1BQ8WUY9 529 aa16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 FDXACB1Q9BRP7 624 aaPredicted RBP16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 DHX35Q9H5Z1 703 aaKnown RBP16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 PPCSQ9HAB8 311 aa16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 ERAP1Q9NZ08 941 aa16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 PLA2G4CQ9UP65 541 aa16.36■□□□□ 0.21
SNAPC1-201ENST00000216294 HBS1LQ9Y450 684 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms