RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 UBR7Q8N806 425 aa7.84□□□□□ -1.15
PHGDH-225ENST00000641720 TAF4BQ92750 862 aa7.84□□□□□ -1.15
PHGDH-225ENST00000641720 KAT5Q92993 513 aa7.84□□□□□ -1.15
PHGDH-225ENST00000641720 TATDN2Q93075 761 aa7.84□□□□□ -1.15
PHGDH-225ENST00000641720 CYP2S1Q96SQ9 504 aa7.84□□□□□ -1.15
PHGDH-225ENST00000641720 MMS19Q96T76 1030 aa7.84□□□□□ -1.15
PHGDH-225ENST00000641720 SIX2Q9NPC8 291 aa7.84□□□□□ -1.15
PHGDH-225ENST00000641720 CD93Q9NPY3 652 aa7.84□□□□□ -1.15
PHGDH-225ENST00000641720 THG1LQ9NWX6 298 aaKnown RBP7.84□□□□□ -1.15
PHGDH-225ENST00000641720 R3HCC1Q9Y3T6 440 aaKnown RBP7.84□□□□□ -1.15
PHGDH-225ENST00000641720 A0A087WV48 116 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 C2orf78A6NCI8 922 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 PES1O00541 588 aaKnown RBP7.83□□□□□ -1.16
PHGDH-225ENST00000641720 GABRDO14764 452 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 EPHB6O15197 1021 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 P4HA2O15460 535 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 ATP2C2O75185 946 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 PRB1P04280 392 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 CYP17A1P05093 508 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 SERPINF2P08697 491 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 FTH1P19P0C7X4 201 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 CD58P19256 250 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 SLC9A1P19634 815 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 WARSP23381 471 aaKnown RBP7.83□□□□□ -1.16
PHGDH-225ENST00000641720 LMO2P25791 158 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 PON1P27169 355 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 TUFMP49411 452 aaKnown RBP7.83□□□□□ -1.16
PHGDH-225ENST00000641720 KLK7P49862 253 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 PSMC1P62191 440 aaKnown RBP7.83□□□□□ -1.16
PHGDH-225ENST00000641720 BNC1Q01954 994 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 MGAT5BQ3V5L5 792 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 EMC10Q5UCC4 262 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 SDHAF4Q5VUM1 108 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 GJB7Q6PEY0 223 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 PCSK4Q6UW60 755 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 ARMCX6Q7L4S7 300 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 CPA6Q8N4T0 437 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 MINDY1Q8N5J2 469 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 CCDC33Q8N5R6 958 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 SPPL2BQ8TCT7 592 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 C2orf15Q8WU43 125 aaKnown RBP7.83□□□□□ -1.16
PHGDH-225ENST00000641720 KREMEN1Q96MU8 473 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 NAP1L5Q96NT1 182 aaPredicted RBP7.83□□□□□ -1.16
PHGDH-225ENST00000641720 NT5C1BQ96P26 610 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 TWNKQ96RR1 684 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 SEPT5Q99719 369 aaPredicted RBP7.83□□□□□ -1.16
PHGDH-225ENST00000641720 IMPG2Q9BZV3 1241 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 RBSNQ9H1K0 784 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 DPEP3Q9H4B8 488 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 ZDHHC4Q9NPG8 344 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 DUS2Q9NX74 493 aaKnown RBP7.83□□□□□ -1.16
PHGDH-225ENST00000641720 DSEQ9UL01 958 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 RAXQ9Y2V3 346 aa7.83□□□□□ -1.16
PHGDH-225ENST00000641720 TDRD6O60522 2096 aaKnown RBP7.82□□□□□ -1.16
PHGDH-225ENST00000641720 LRRK2Q5S007 2527 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 IGHV1OR15-9A0A0B4J2B8 117 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 A0A1B0GTH6 734 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 GTPBP10A4D1E9 387 aaKnown RBP7.82□□□□□ -1.16
PHGDH-225ENST00000641720 TEX33O43247 280 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 SH3BP5O60239 455 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 CILPO75339 1184 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 TACC1O75410 805 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 ACO1P21399 889 aaKnown RBP7.82□□□□□ -1.16
PHGDH-225ENST00000641720 AVPR1AP37288 418 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 SLC6A11P48066 632 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 MRPS21P82921 87 aaKnown RBP7.82□□□□□ -1.16
PHGDH-225ENST00000641720 INCA1Q0VD86 236 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 KCNMA1Q12791 1236 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 CUL2Q13617 745 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 EXOC3L4Q17RC7 722 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 C2orf27AQ580R0 203 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 INTS6LQ5JSJ4 861 aaKnown RBP7.82□□□□□ -1.16
PHGDH-225ENST00000641720 GBP6Q6ZN66 633 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 DBX2Q6ZNG2 339 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 RRAGAQ7L523 313 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 TMPRSS7Q7RTY8 843 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 METTL23Q86XA0 190 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 MARCH9Q86YJ5 346 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 MIB1Q86YT6 1006 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 ETFBKMTQ8IXQ9 262 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 TMEM86AQ8N2M4 240 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 PPM1KQ8N3J5 372 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 ALLCQ8N6M5 410 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 PNPLA1Q8N8W4 532 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 TXNDC5Q8NBS9 432 aaKnown RBP7.82□□□□□ -1.16
PHGDH-225ENST00000641720 EHBP1Q8NDI1 1231 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 ANKRD20A12PQ8NF67 263 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 ATP2A3Q93084 1043 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 SYT15Q9BQS2 421 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 NUSAP1Q9BXS6 441 aaKnown RBP7.82□□□□□ -1.16
PHGDH-225ENST00000641720 ELOVL4Q9GZR5 314 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 GANQ9H2C0 597 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 SLC32A1Q9H598 525 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 CRTAC1Q9NQ79 661 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 DDX43Q9NXZ2 648 aaKnown RBP7.82□□□□□ -1.16
PHGDH-225ENST00000641720 SLC6A14Q9UN76 642 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 ARHGAP26Q9UNA1 814 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 SIK3Q9Y2K2 1263 aa7.82□□□□□ -1.16
PHGDH-225ENST00000641720 A0A1W2PQF6 199 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 LRRC10BA6NIK2 292 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms